RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 SPATA31C1P0DKV0 1188 aa28.32■■■□□ 2.12
TSPAN4-207ENST00000397411 XRCC6P12956 609 aaKnown RBP eCLIP28.32■■■□□ 2.12
TSPAN4-207ENST00000397411 RPA1P27694 616 aa28.32■■■□□ 2.12
TSPAN4-207ENST00000397411 RFC5P40937 340 aa28.32■■■□□ 2.12
TSPAN4-207ENST00000397411 LPIN1Q14693 890 aa28.32■■■□□ 2.12
TSPAN4-207ENST00000397411 FBXO47Q5MNV8 452 aa28.32■■■□□ 2.12
TSPAN4-207ENST00000397411 ARL6IP4Q66PJ3 421 aaKnown RBP28.32■■■□□ 2.12
TSPAN4-207ENST00000397411 ZNF710Q8N1W2 664 aa28.32■■■□□ 2.12
TSPAN4-207ENST00000397411 USP38Q8NB14 1042 aa28.32■■■□□ 2.12
TSPAN4-207ENST00000397411 PIGOQ8TEQ8 1089 aa28.32■■■□□ 2.12
TSPAN4-207ENST00000397411 APBB2Q92870 758 aa28.32■■■□□ 2.12
TSPAN4-207ENST00000397411 A0A087WWV3 80 aa28.31■■■□□ 2.12
TSPAN4-207ENST00000397411 SOX1O00570 391 aaPredicted RBP28.31■■■□□ 2.12
TSPAN4-207ENST00000397411 NLRP11P59045 1033 aaKnown RBP28.31■■■□□ 2.12
TSPAN4-207ENST00000397411 KIZQ2M2Z5 673 aa28.31■■■□□ 2.12
TSPAN4-207ENST00000397411 FAM173BQ6P4H8 233 aa28.31■■■□□ 2.12
TSPAN4-207ENST00000397411 TSHZ1Q6ZSZ6 1077 aa28.31■■■□□ 2.12
TSPAN4-207ENST00000397411 IGSF22Q8N9C0 903 aa28.31■■■□□ 2.12
TSPAN4-207ENST00000397411 ZNF579Q8NAF0 562 aaKnown RBP28.31■■■□□ 2.12
TSPAN4-207ENST00000397411 SNX29Q8TEQ0 813 aa28.31■■■□□ 2.12
TSPAN4-207ENST00000397411 OSBPL7Q9BZF2 842 aa28.31■■■□□ 2.12
TSPAN4-207ENST00000397411 SUCLA2Q9P2R7 463 aaPredicted RBP28.31■■■□□ 2.12
TSPAN4-207ENST00000397411 SQORQ9Y6N5 450 aa28.31■■■□□ 2.12
TSPAN4-207ENST00000397411 LOXHD1Q8IVV2 1947 aa28.31■■■□□ 2.12
TSPAN4-207ENST00000397411 ATP2A2P16615 1042 aaKnown RBP28.3■■■□□ 2.12
TSPAN4-207ENST00000397411 FXR1P51114 621 aaKnown RBP eCLIP28.3■■■□□ 2.12
TSPAN4-207ENST00000397411 CRYBB1P53674 252 aaPredicted RBP28.3■■■□□ 2.12
TSPAN4-207ENST00000397411 CDC42EP1Q00587 391 aa28.3■■■□□ 2.12
TSPAN4-207ENST00000397411 CEBPZQ03701 1054 aaKnown RBP28.3■■■□□ 2.12
TSPAN4-207ENST00000397411 IL17AQ16552 155 aa28.3■■■□□ 2.12
TSPAN4-207ENST00000397411 ODR4Q5SWX8 454 aa28.3■■■□□ 2.12
TSPAN4-207ENST00000397411 LRCH3Q96II8 777 aa28.3■■■□□ 2.12
TSPAN4-207ENST00000397411 BMP2KQ9NSY1 1161 aaPredicted RBP28.3■■■□□ 2.12
TSPAN4-207ENST00000397411 KDM3AQ9Y4C1 1321 aa28.29■■■□□ 2.12
TSPAN4-207ENST00000397411 MUTP22033 750 aa28.29■■■□□ 2.12
TSPAN4-207ENST00000397411 SMAD3P84022 425 aaKnown RBP28.29■■■□□ 2.12
TSPAN4-207ENST00000397411 ZRSR1Q15695 479 aaKnown RBP28.29■■■□□ 2.12
TSPAN4-207ENST00000397411 LINC01465Q8N7H1 131 aa28.29■■■□□ 2.12
TSPAN4-207ENST00000397411 NLRP7Q8WX94 980 aa28.29■■■□□ 2.12
TSPAN4-207ENST00000397411 CEP89Q96ST8 783 aa28.29■■■□□ 2.12
TSPAN4-207ENST00000397411 CDHR5Q9HBB8 845 aa28.29■■■□□ 2.12
TSPAN4-207ENST00000397411 CLIC4Q9Y696 253 aa28.29■■■□□ 2.12
TSPAN4-207ENST00000397411 IGKV6-21A0A0C4DH24 114 aa28.28■■■□□ 2.12
TSPAN4-207ENST00000397411 GRXCR1A8MXD5 290 aa28.28■■■□□ 2.12
TSPAN4-207ENST00000397411 ZSCAN22P10073 491 aaPredicted RBP28.28■■■□□ 2.12
TSPAN4-207ENST00000397411 CD52P31358 61 aa28.28■■■□□ 2.12
TSPAN4-207ENST00000397411 NFX1Q12986 1120 aaKnown RBP28.28■■■□□ 2.12
TSPAN4-207ENST00000397411 PAK2Q13177 524 aa28.28■■■□□ 2.12
TSPAN4-207ENST00000397411 TCTN1Q2MV58 587 aa28.28■■■□□ 2.12
TSPAN4-207ENST00000397411 POTEGQ6S5H5 508 aa28.28■■■□□ 2.12
TSPAN4-207ENST00000397411 TCP11Q8WWU5 503 aa28.28■■■□□ 2.12
TSPAN4-207ENST00000397411 ZNF668Q96K58 619 aaPredicted RBP28.28■■■□□ 2.12
TSPAN4-207ENST00000397411 ZNF396Q96N95 335 aaPredicted RBP28.28■■■□□ 2.12
TSPAN4-207ENST00000397411 SLC9A7Q96T83 725 aa28.28■■■□□ 2.12
TSPAN4-207ENST00000397411 OSMRQ99650 979 aa28.28■■■□□ 2.12
TSPAN4-207ENST00000397411 MTRQ99707 1265 aa28.28■■■□□ 2.12
TSPAN4-207ENST00000397411 KIAA1024Q9UPX6 916 aa28.28■■■□□ 2.12
TSPAN4-207ENST00000397411 PP2D1A8MPX8 630 aa28.27■■■□□ 2.12
TSPAN4-207ENST00000397411 GPR32O75388 356 aa28.27■■■□□ 2.12
TSPAN4-207ENST00000397411 RPS6KA5O75582 802 aa28.27■■■□□ 2.12
TSPAN4-207ENST00000397411 AMHP03971 560 aa28.27■■■□□ 2.12
TSPAN4-207ENST00000397411 CDC25AP30304 524 aa28.27■■■□□ 2.12
TSPAN4-207ENST00000397411 WDR5P61964 334 aaKnown RBP28.27■■■□□ 2.12
TSPAN4-207ENST00000397411 EMC2Q15006 297 aa28.27■■■□□ 2.12
TSPAN4-207ENST00000397411 RHPN2Q8IUC4 686 aa28.27■■■□□ 2.12
TSPAN4-207ENST00000397411 PHOSPHO2Q8TCD6 241 aa28.27■■■□□ 2.12
TSPAN4-207ENST00000397411 ZBED2Q9BTP6 218 aa28.27■■■□□ 2.12
TSPAN4-207ENST00000397411 DHX33Q9H6R0 707 aaKnown RBP28.27■■■□□ 2.12
TSPAN4-207ENST00000397411 MSRAQ9UJ68 235 aa28.27■■■□□ 2.12
TSPAN4-207ENST00000397411 ARHGEF35A5YM69 484 aa28.26■■■□□ 2.11
TSPAN4-207ENST00000397411 GAS2O43903 313 aaKnown RBP28.26■■■□□ 2.11
TSPAN4-207ENST00000397411 MKRN4PQ13434 485 aaPredicted RBP28.26■■■□□ 2.11
TSPAN4-207ENST00000397411 DRP2Q13474 957 aa28.26■■■□□ 2.11
TSPAN4-207ENST00000397411 FAM109BQ6ICB4 259 aaPredicted RBP28.26■■■□□ 2.11
TSPAN4-207ENST00000397411 TMEM143Q96AN5 459 aa28.26■■■□□ 2.11
TSPAN4-207ENST00000397411 CDK5RAP3Q96JB5 506 aa28.26■■■□□ 2.11
TSPAN4-207ENST00000397411 AGO3Q9H9G7 860 aaKnown RBP28.26■■■□□ 2.11
TSPAN4-207ENST00000397411 ATP6V0A4Q9HBG4 840 aa28.26■■■□□ 2.11
TSPAN4-207ENST00000397411 DDX19AQ9NUU7 478 aaKnown RBP28.26■■■□□ 2.11
TSPAN4-207ENST00000397411 DBR1Q9UK59 544 aaKnown RBP28.26■■■□□ 2.11
TSPAN4-207ENST00000397411 PADI3Q9ULW8 664 aa28.26■■■□□ 2.11
TSPAN4-207ENST00000397411 NOC2LQ9Y3T9 749 aaKnown RBP28.26■■■□□ 2.11
TSPAN4-207ENST00000397411 RBAK-RBAKDNI3L0D1 243 aa28.25■■■□□ 2.11
TSPAN4-207ENST00000397411 GPR182O15218 404 aa28.25■■■□□ 2.11
TSPAN4-207ENST00000397411 DGAT1O75907 488 aa28.25■■■□□ 2.11
TSPAN4-207ENST00000397411 RARRES1P49788 294 aa28.25■■■□□ 2.11
TSPAN4-207ENST00000397411 GPC3P51654 580 aa28.25■■■□□ 2.11
TSPAN4-207ENST00000397411 PSPC1Q8WXF1 523 aaKnown RBP28.25■■■□□ 2.11
TSPAN4-207ENST00000397411 GCOM2Q9BZD3 368 aaPredicted RBP28.25■■■□□ 2.11
TSPAN4-207ENST00000397411 DNM3Q9UQ16 869 aa28.25■■■□□ 2.11
TSPAN4-207ENST00000397411 SIP14410 1827 aa28.25■■■□□ 2.11
TSPAN4-207ENST00000397411 F13A1P00488 732 aa28.24■■■□□ 2.11
TSPAN4-207ENST00000397411 UBA7P41226 1012 aa28.24■■■□□ 2.11
TSPAN4-207ENST00000397411 RAB30Q15771 203 aa28.24■■■□□ 2.11
TSPAN4-207ENST00000397411 AK8Q96MA6 479 aa28.24■■■□□ 2.11
TSPAN4-207ENST00000397411 ADAMTS10Q9H324 1103 aa28.24■■■□□ 2.11
TSPAN4-207ENST00000397411 ARID2Q68CP9 1835 aa28.23■■■□□ 2.11
TSPAN4-207ENST00000397411 ASAP2O43150 1006 aa28.23■■■□□ 2.11
TSPAN4-207ENST00000397411 USO1O60763 962 aaKnown RBP28.23■■■□□ 2.11
TSPAN4-207ENST00000397411 MARCKSP29966 332 aaPredicted RBP28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms