RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 EFCAB12Q6NXP0 572 aa15.66■□□□□ 0.1
SEC13-204ENST00000397099 CCDC83Q8IWF9 413 aa15.66■□□□□ 0.1
SEC13-204ENST00000397099 OSBPL7Q9BZF2 842 aa15.66■□□□□ 0.1
SEC13-204ENST00000397099 FOXP1Q9H334 677 aaPredicted RBP15.66■□□□□ 0.1
SEC13-204ENST00000397099 GJB4Q9NTQ9 266 aa15.66■□□□□ 0.1
SEC13-204ENST00000397099 VAV3Q9UKW4 847 aa15.66■□□□□ 0.1
SEC13-204ENST00000397099 SPTBN5Q9NRC6 3674 aaKnown RBP15.65■□□□□ 0.1
SEC13-204ENST00000397099 BTBD18B2RXH4 712 aa15.65■□□□□ 0.1
SEC13-204ENST00000397099 GAS2O43903 313 aaKnown RBP15.65■□□□□ 0.1
SEC13-204ENST00000397099 TMEM62Q0P6H9 643 aa15.65■□□□□ 0.1
SEC13-204ENST00000397099 EPHA7Q15375 998 aa15.65■□□□□ 0.1
SEC13-204ENST00000397099 TARBP2Q15633 366 aaKnown RBP15.65■□□□□ 0.1
SEC13-204ENST00000397099 AAK1Q2M2I8 961 aa15.65■□□□□ 0.1
SEC13-204ENST00000397099 OTUD6AQ7L8S5 288 aa15.65■□□□□ 0.1
SEC13-204ENST00000397099 NPAS4Q8IUM7 802 aa15.65■□□□□ 0.1
SEC13-204ENST00000397099 NEK9Q8TD19 979 aa15.65■□□□□ 0.1
SEC13-204ENST00000397099 ADAMTS19Q8TE59 1207 aa15.65■□□□□ 0.1
SEC13-204ENST00000397099 AGO3Q9H9G7 860 aaKnown RBP15.65■□□□□ 0.1
SEC13-204ENST00000397099 C1orf112Q9NSG2 853 aa15.65■□□□□ 0.1
SEC13-204ENST00000397099 SEPT9Q9UHD8 586 aaPredicted RBP15.65■□□□□ 0.1
SEC13-204ENST00000397099 PCDHA12Q9UN75 941 aa15.65■□□□□ 0.1
SEC13-204ENST00000397099 AKT3Q9Y243 479 aa15.65■□□□□ 0.1
SEC13-204ENST00000397099 XIRP2A4UGR9 3374 aa15.65■□□□□ 0.1
SEC13-204ENST00000397099 TFF2Q03403 129 aa15.64■□□□□ 0.09
SEC13-204ENST00000397099 CALCRLQ16602 461 aa15.64■□□□□ 0.09
SEC13-204ENST00000397099 C4orf19Q8IY42 314 aa15.64■□□□□ 0.09
SEC13-204ENST00000397099 LINC01465Q8N7H1 131 aa15.64■□□□□ 0.09
SEC13-204ENST00000397099 FBXO22Q8NEZ5 403 aa15.64■□□□□ 0.09
SEC13-204ENST00000397099 FBXO18Q8NFZ0 1043 aa15.64■□□□□ 0.09
SEC13-204ENST00000397099 HAS1Q92839 578 aa15.64■□□□□ 0.09
SEC13-204ENST00000397099 ZBTB10Q96DT7 871 aa15.64■□□□□ 0.09
SEC13-204ENST00000397099 INO80BQ9C086 356 aaPredicted RBP15.64■□□□□ 0.09
SEC13-204ENST00000397099 ZSWIM4Q9H7M6 989 aa15.64■□□□□ 0.09
SEC13-204ENST00000397099 NLRC5Q86WI3 1866 aa15.63■□□□□ 0.09
SEC13-204ENST00000397099 DDX11L8A8MPP1 907 aa15.63■□□□□ 0.09
SEC13-204ENST00000397099 TNFRSF10AO00220 468 aa15.63■□□□□ 0.09
SEC13-204ENST00000397099 NEMFO60524 1076 aa15.63■□□□□ 0.09
SEC13-204ENST00000397099 LPXNO60711 386 aa15.63■□□□□ 0.09
SEC13-204ENST00000397099 GPR32O75388 356 aa15.63■□□□□ 0.09
SEC13-204ENST00000397099 RB1P06400 928 aa15.63■□□□□ 0.09
SEC13-204ENST00000397099 TRAPPC10P48553 1259 aa15.63■□□□□ 0.09
SEC13-204ENST00000397099 ST3GAL1Q11201 340 aa15.63■□□□□ 0.09
SEC13-204ENST00000397099 NFX1Q12986 1120 aaKnown RBP15.63■□□□□ 0.09
SEC13-204ENST00000397099 GNL2Q13823 731 aaKnown RBP15.63■□□□□ 0.09
SEC13-204ENST00000397099 UGCGQ16739 394 aa15.63■□□□□ 0.09
SEC13-204ENST00000397099 TRMT1LQ7Z2T5 733 aaKnown RBP15.63■□□□□ 0.09
SEC13-204ENST00000397099 POTEDQ86YR6 584 aa15.63■□□□□ 0.09
SEC13-204ENST00000397099 FIBCD1Q8N539 461 aa15.63■□□□□ 0.09
SEC13-204ENST00000397099 SLC7A3Q8WY07 619 aa15.63■□□□□ 0.09
SEC13-204ENST00000397099 RSPH1Q8WYR4 309 aa15.63■□□□□ 0.09
SEC13-204ENST00000397099 UHRF1Q96T88 793 aaPredicted RBP15.63■□□□□ 0.09
SEC13-204ENST00000397099 C17orf80Q9BSJ5 609 aa15.63■□□□□ 0.09
SEC13-204ENST00000397099 SUGCTQ9HAC7 445 aa15.63■□□□□ 0.09
SEC13-204ENST00000397099 ERVK-5Q9HDB9 667 aa15.63■□□□□ 0.09
SEC13-204ENST00000397099 GINS2Q9Y248 185 aa15.63■□□□□ 0.09
SEC13-204ENST00000397099 COL4A4P53420 1690 aaPredicted RBP15.63■□□□□ 0.09
SEC13-204ENST00000397099 ADGRA3Q8IWK6 1321 aa15.63■□□□□ 0.09
SEC13-204ENST00000397099 IGKV6-21A0A0C4DH24 114 aa15.62■□□□□ 0.09
SEC13-204ENST00000397099 DENND3A2RUS2 1198 aa15.62■□□□□ 0.09
SEC13-204ENST00000397099 MAFO75444 373 aaPredicted RBP15.62■□□□□ 0.09
SEC13-204ENST00000397099 EIF4BP23588 611 aaKnown RBP15.62■□□□□ 0.09
SEC13-204ENST00000397099 RFC5P40937 340 aa15.62■□□□□ 0.09
SEC13-204ENST00000397099 SARSP49591 514 aaKnown RBP15.62■□□□□ 0.09
SEC13-204ENST00000397099 NLRP11P59045 1033 aaKnown RBP15.62■□□□□ 0.09
SEC13-204ENST00000397099 PTPROQ16827 1216 aa15.62■□□□□ 0.09
SEC13-204ENST00000397099 KIZQ2M2Z5 673 aa15.62■□□□□ 0.09
SEC13-204ENST00000397099 MTERF2Q49AM1 385 aa15.62■□□□□ 0.09
SEC13-204ENST00000397099 EARS2Q5JPH6 523 aaKnown RBP15.62■□□□□ 0.09
SEC13-204ENST00000397099 SLC24A5Q71RS6 500 aa15.62■□□□□ 0.09
SEC13-204ENST00000397099 ZNF410Q86VK4 478 aa15.62■□□□□ 0.09
SEC13-204ENST00000397099 BANK1Q8NDB2 785 aa15.62■□□□□ 0.09
SEC13-204ENST00000397099 GJA10Q969M2 543 aa15.62■□□□□ 0.09
SEC13-204ENST00000397099 RGS18Q9NS28 235 aa15.62■□□□□ 0.09
SEC13-204ENST00000397099 LRFN2Q9ULH4 789 aa15.62■□□□□ 0.09
SEC13-204ENST00000397099 ST3GAL5Q9UNP4 418 aa15.62■□□□□ 0.09
SEC13-204ENST00000397099 COG5Q9UP83 839 aa15.62■□□□□ 0.09
SEC13-204ENST00000397099 NOC2LQ9Y3T9 749 aaKnown RBP15.62■□□□□ 0.09
SEC13-204ENST00000397099 DGKIO75912 1065 aa15.61■□□□□ 0.09
SEC13-204ENST00000397099 VTNP04004 478 aa15.61■□□□□ 0.09
SEC13-204ENST00000397099 ZSCAN20P17040 1043 aaPredicted RBP15.61■□□□□ 0.09
SEC13-204ENST00000397099 KCNQ1P51787 676 aa15.61■□□□□ 0.09
SEC13-204ENST00000397099 CLCN3P51790 818 aa15.61■□□□□ 0.09
SEC13-204ENST00000397099 ANO5Q75V66 913 aa15.61■□□□□ 0.09
SEC13-204ENST00000397099 CMTR2Q8IYT2 770 aaKnown RBP15.61■□□□□ 0.09
SEC13-204ENST00000397099 CLP1Q92989 425 aaKnown RBP15.61■□□□□ 0.09
SEC13-204ENST00000397099 HLA-CQ95604 372 aa15.61■□□□□ 0.09
SEC13-204ENST00000397099 ZNF689Q96CS4 500 aaPredicted RBP15.61■□□□□ 0.09
SEC13-204ENST00000397099 SCLT1Q96NL6 688 aa15.61■□□□□ 0.09
SEC13-204ENST00000397099 OSMRQ99650 979 aa15.61■□□□□ 0.09
SEC13-204ENST00000397099 LXNQ9BS40 222 aa15.61■□□□□ 0.09
SEC13-204ENST00000397099 GCOM2Q9BZD3 368 aaPredicted RBP15.61■□□□□ 0.09
SEC13-204ENST00000397099 ADAMTS10Q9H324 1103 aa15.61■□□□□ 0.09
SEC13-204ENST00000397099 ELAC1Q9H777 363 aaKnown RBP15.61■□□□□ 0.09
SEC13-204ENST00000397099 TTC12Q9H892 705 aaPredicted RBP15.61■□□□□ 0.09
SEC13-204ENST00000397099 CYP26B1Q9NR63 512 aa15.61■□□□□ 0.09
SEC13-204ENST00000397099 NOL7Q9UMY1 257 aaKnown RBP15.61■□□□□ 0.09
SEC13-204ENST00000397099 PCDHB7Q9Y5E2 793 aa15.61■□□□□ 0.09
SEC13-204ENST00000397099 PRRC2BQ5JSZ5 2229 aaKnown RBP15.61■□□□□ 0.09
SEC13-204ENST00000397099 C5orf67F2Z3F1 127 aa15.6■□□□□ 0.09
SEC13-204ENST00000397099 EML1O00423 815 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms