RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 LAD1O00515 517 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 HNRNPH2P55795 449 aaKnown RBP11.01□□□□□ -0.65
COL4A4-201ENST00000396625 BFSP2Q13515 415 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 FAM26FQ5R3K3 315 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 NDUFAF2Q8N183 169 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 RNF139Q8WU17 664 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.01□□□□□ -0.65
COL4A4-201ENST00000396625 EIF4A3P38919 411 aaKnown RBP11.01□□□□□ -0.65
COL4A4-201ENST00000396625 ST13P5Q8NFI4 369 aaPredicted RBP11.01□□□□□ -0.65
COL4A4-201ENST00000396625 PAPOLBQ9NRJ5 636 aaKnown RBP11.01□□□□□ -0.65
COL4A4-201ENST00000396625 TMEM161AQ9NX61 479 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 RGS12O14924 1447 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 TCIRG1Q13488 830 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 KBTBD3Q8NAB2 608 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 FBXO18Q8NFZ0 1043 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 LARP4BQ92615 738 aaKnown RBP11□□□□□ -0.65
COL4A4-201ENST00000396625 FLT4P35916 1363 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 CIITAP33076 1130 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 CDO1Q16878 200 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 ABCB6Q9NP58 842 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 SOX13Q9UN79 622 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 MRPL11Q9Y3B7 192 aaKnown RBP11□□□□□ -0.65
COL4A4-201ENST00000396625 POLR3AO14802 1390 aaPredicted RBP11□□□□□ -0.65
COL4A4-201ENST00000396625 NBPF26B4DH59 902 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 NFIBO00712 420 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 ANGPT2O15123 496 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 ARHGAP17Q68EM7 881 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 APLFQ8IW19 511 aaPredicted RBP11□□□□□ -0.65
COL4A4-201ENST00000396625 SMYD4Q8IYR2 804 aaPredicted RBP11□□□□□ -0.65
COL4A4-201ENST00000396625 NBPF15Q8N660 670 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 CHURC1Q8WUH1 139 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 C19orf60Q96EN9 201 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 ADGRF5Q8IZF2 1346 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 EYA2O00167 538 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 ABCD1P33897 745 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 TRIM25Q14258 630 aaKnown RBP11□□□□□ -0.65
COL4A4-201ENST00000396625 STXBP2Q15833 593 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 ANO4Q32M45 955 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 KIAA1755Q5JYT7 1200 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 TRIM69Q86WT6 500 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 TRIM16LQ309B1 348 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 RNF219Q5W0B1 726 aaPredicted RBP11□□□□□ -0.65
COL4A4-201ENST00000396625 ARHGEF25Q86VW2 580 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 RBM46Q8TBY0 533 aaKnown RBP11□□□□□ -0.65
COL4A4-201ENST00000396625 NDUFB9Q9Y6M9 179 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 UNC13AQ9UPW8 1703 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 PODXLO00592 558 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 DDAH1O94760 285 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 IL2RBP14784 551 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 NUP62P37198 522 aaPredicted RBP11□□□□□ -0.65
COL4A4-201ENST00000396625 PSMC6P62333 389 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 PPP2R2AP63151 447 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 CAV1Q03135 178 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 CLIC6Q96NY7 704 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 CASS4Q9NQ75 786 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 SERPINB3P29508 390 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 TERF2Q15554 542 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 KLHL38Q2WGJ6 581 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 TBC1D9BQ66K14 1250 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 SH3BP5LQ7L8J4 393 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 NUP93Q8N1F7 819 aa11□□□□□ -0.65
COL4A4-201ENST00000396625 SARS2Q9NP81 518 aaKnown RBP11□□□□□ -0.65
COL4A4-201ENST00000396625 C16orf96A6NNT2 1141 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 M0R3G1 203 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 MEIS1O00470 390 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 RASSF9O75901 435 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 BRD1O95696 1058 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 GUCA1CO95843 209 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 SARM1Q6SZW1 724 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 ZNF507Q8TCN5 953 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 PANX2Q96RD6 677 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 PRPF18Q99633 342 aaKnown RBP10.99□□□□□ -0.65
COL4A4-201ENST00000396625 MYO1GB0I1T2 1018 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 HIC1Q14526 733 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 MAN2A1Q16706 1144 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 IYDQ6PHW0 289 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 CCDC149Q6ZUS6 474 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 FAM89AQ96GI7 184 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 ZNF594Q96JF6 807 aaPredicted RBP10.99□□□□□ -0.65
COL4A4-201ENST00000396625 BBS2Q9BXC9 721 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 FBXL5Q9UKA1 691 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 C5orf58C9J3I9 102 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 GYS2P54840 703 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 PPP1R36Q96LQ0 422 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 DSCC1Q9BVC3 393 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 RWDD2AQ9UIY3 292 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 KIF20BQ96Q89 1820 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 GMNCA6NCL1 334 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 BNIP3LO60238 219 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 CAPN1P07384 714 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 DDX5P17844 614 aaKnown RBP10.99□□□□□ -0.65
COL4A4-201ENST00000396625 MAPRE2Q15555 327 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 HEXIM2Q96MH2 286 aaKnown RBP10.99□□□□□ -0.65
COL4A4-201ENST00000396625 SIKE1Q9BRV8 207 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 LRRC4Q9HBW1 653 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 ARIH1Q9Y4X5 557 aaPredicted RBP10.99□□□□□ -0.65
COL4A4-201ENST00000396625 TAF5LO75529 589 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 CSPG5O95196 566 aa10.99□□□□□ -0.65
COL4A4-201ENST00000396625 ALDH18A1P54886 795 aaKnown RBP10.99□□□□□ -0.65
COL4A4-201ENST00000396625 Q3C1V9 767 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms