RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 NYXQ9GZU5 481 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 CREBZFQ9NS37 354 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 ITIH6Q6UXX5 1313 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 IRS4O14654 1257 aaPredicted RBP9.09□□□□□ -0.95
NDE1-202ENST00000396355 CYLC2Q14093 348 aaPredicted RBP9.09□□□□□ -0.95
NDE1-202ENST00000396355 WLSQ5T9L3 541 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 TSHZ1Q6ZSZ6 1077 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 BRAPQ7Z569 592 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 RBM17Q96I25 401 aaKnown RBP9.09□□□□□ -0.95
NDE1-202ENST00000396355 MAP3K14Q99558 947 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 ALG1Q9BT22 464 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 LY9Q9HBG7 655 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 CLIC5Q9NZA1 410 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 ATXN10Q9UBB4 475 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 WDR19Q8NEZ3 1342 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 KCNK3O14649 394 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 ZSCAN9O15535 394 aaPredicted RBP9.09□□□□□ -0.95
NDE1-202ENST00000396355 CIB2O75838 187 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 EIF2B2P49770 351 aaKnown RBP9.09□□□□□ -0.95
NDE1-202ENST00000396355 TNIP1Q15025 636 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 SLC5A9Q2M3M2 681 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 NUDCD3Q8IVD9 361 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 TC2NQ8N9U0 490 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 TBK1Q9UHD2 729 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 SERTAD1Q9UHV2 236 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 RAB21Q9UL25 225 aa9.09□□□□□ -0.95
NDE1-202ENST00000396355 DOT1LQ8TEK3 1739 aa9.09□□□□□ -0.96
NDE1-202ENST00000396355 SYNRGQ9UMZ2 1314 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 H7C1D1 291 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 SMIM22K7EJ46 135 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 RTN2O75298 545 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 RASSF9O75901 435 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 FTCDO95954 541 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 FGFR2P21802 821 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 EIF4BP23588 611 aaKnown RBP9.08□□□□□ -0.96
NDE1-202ENST00000396355 GUCY1A2P33402 732 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 PHBP35232 272 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 METAP2P50579 478 aaKnown RBP eCLIP9.08□□□□□ -0.96
NDE1-202ENST00000396355 DENND2CQ68D51 928 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 TAOK1Q7L7X3 1001 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 NOP9Q86U38 636 aaKnown RBP9.08□□□□□ -0.96
NDE1-202ENST00000396355 RBM12BQ8IXT5 1001 aaKnown RBP9.08□□□□□ -0.96
NDE1-202ENST00000396355 RAPGEF5Q92565 580 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 ZNF512BQ96KM6 892 aaPredicted RBP9.08□□□□□ -0.96
NDE1-202ENST00000396355 CHP1Q99653 195 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 TMOD2Q9NZR1 351 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 MTUS1Q9ULD2 1270 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 ZNF148Q9UQR1 794 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 HPSEQ9Y251 543 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 TAF1P21675 1872 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 NHSQ6T4R5 1651 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 ATP9AO75110 1047 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 NDUFA10O95299 355 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 ERCC5P28715 1186 aaPredicted RBP9.08□□□□□ -0.96
NDE1-202ENST00000396355 PHEXP78562 749 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 RNASELQ05823 741 aaKnown RBP9.08□□□□□ -0.96
NDE1-202ENST00000396355 CTDSPL2Q05D32 466 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 SLC39A14Q15043 492 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 KRT40Q6A162 431 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 ZBTB46Q86UZ6 589 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 NME8Q8N427 588 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 DNAJC1Q96KC8 554 aaKnown RBP9.08□□□□□ -0.96
NDE1-202ENST00000396355 STRBPQ96SI9 672 aaKnown RBP9.08□□□□□ -0.96
NDE1-202ENST00000396355 BLZF1Q9H2G9 400 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 BHMT2Q9H2M3 363 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 TAF1DQ9H5J8 278 aaPredicted RBP9.08□□□□□ -0.96
NDE1-202ENST00000396355 FAM207AQ9NSI2 230 aaPredicted RBP9.08□□□□□ -0.96
NDE1-202ENST00000396355 SCINQ9Y6U3 715 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 MYH14Q7Z406 1995 aaKnown RBP9.08□□□□□ -0.96
NDE1-202ENST00000396355 NFKBIEO00221 500 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 VEGFBP49765 207 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 BLMHQ13867 455 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 RASGRF1Q13972 1273 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 UBE3CQ15386 1083 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 GRAMD1BQ3KR37 738 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 FOXP4Q8IVH2 680 aaPredicted RBP9.08□□□□□ -0.96
NDE1-202ENST00000396355 TSEN2Q8NCE0 465 aaKnown RBP9.08□□□□□ -0.96
NDE1-202ENST00000396355 NELFBQ8WX92 580 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 MS4A14Q96JA4 679 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 PRMT1Q99873 361 aaKnown RBP9.08□□□□□ -0.96
NDE1-202ENST00000396355 AP1M1Q9BXS5 423 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 OSBPL7Q9BZF2 842 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 LRWD1Q9UFC0 647 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 HDAC9Q9UKV0 1011 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 PNMA2Q9UL42 364 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 HYOU1Q9Y4L1 999 aa9.08□□□□□ -0.96
NDE1-202ENST00000396355 CASZ1Q86V15 1759 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 ZSCAN5CA6NGD5 496 aaPredicted RBP9.07□□□□□ -0.96
NDE1-202ENST00000396355 FOXN1O15353 648 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 KRT10P13645 584 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 CMA1P23946 247 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 CASP1P29466 404 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 KIF11P52732 1056 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 MTTPP55157 894 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 GRIN1Q05586 938 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 ACAP1Q15027 740 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 POSTNQ15063 836 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 TTMPQ5BVD1 217 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 GJC2Q5T442 439 aaPredicted RBP9.07□□□□□ -0.96
NDE1-202ENST00000396355 LRRC8BQ6P9F7 803 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms