RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 RUBCNQ92622 972 aa18.38■□□□□ 0.53
NUP50-202ENST00000396096 SPAG5Q96R06 1193 aa18.38■□□□□ 0.53
NUP50-202ENST00000396096 TLR10Q9BXR5 811 aa18.38■□□□□ 0.53
NUP50-202ENST00000396096 PPP1R9AQ9ULJ8 1098 aa18.38■□□□□ 0.53
NUP50-202ENST00000396096 PCDHGC5Q9Y5F6 944 aa18.38■□□□□ 0.53
NUP50-202ENST00000396096 FDX1P10109 184 aa18.37■□□□□ 0.53
NUP50-202ENST00000396096 ODR4Q5SWX8 454 aa18.37■□□□□ 0.53
NUP50-202ENST00000396096 TCERG1LQ5VWI1 586 aa18.37■□□□□ 0.53
NUP50-202ENST00000396096 DAW1Q8N136 415 aa18.37■□□□□ 0.53
NUP50-202ENST00000396096 ANKRD13CQ8N6S4 541 aa18.37■□□□□ 0.53
NUP50-202ENST00000396096 COG1Q8WTW3 980 aa18.37■□□□□ 0.53
NUP50-202ENST00000396096 AGPAT3Q9NRZ7 376 aa18.37■□□□□ 0.53
NUP50-202ENST00000396096 GCNT4Q9P109 453 aa18.37■□□□□ 0.53
NUP50-202ENST00000396096 NENFQ9UMX5 172 aa18.37■□□□□ 0.53
NUP50-202ENST00000396096 NFKBIEO00221 500 aa18.37■□□□□ 0.53
NUP50-202ENST00000396096 HIP1RO75146 1068 aa18.37■□□□□ 0.53
NUP50-202ENST00000396096 ALAS1P13196 640 aa18.37■□□□□ 0.53
NUP50-202ENST00000396096 OAS2P29728 719 aaKnown RBP18.37■□□□□ 0.53
NUP50-202ENST00000396096 MRPS9P82933 396 aaKnown RBP18.37■□□□□ 0.53
NUP50-202ENST00000396096 PTK2Q05397 1052 aa18.37■□□□□ 0.53
NUP50-202ENST00000396096 ITGB3BPQ13352 177 aaPredicted RBP18.37■□□□□ 0.53
NUP50-202ENST00000396096 ALCAMQ13740 583 aa18.37■□□□□ 0.53
NUP50-202ENST00000396096 PPP2R5AQ15172 486 aa18.37■□□□□ 0.53
NUP50-202ENST00000396096 RBM46Q8TBY0 533 aaKnown RBP18.37■□□□□ 0.53
NUP50-202ENST00000396096 RNF14Q9UBS8 474 aa18.37■□□□□ 0.53
NUP50-202ENST00000396096 ADAMTS1Q9UHI8 967 aa18.37■□□□□ 0.53
NUP50-202ENST00000396096 DAAM1Q9Y4D1 1078 aa18.37■□□□□ 0.53
NUP50-202ENST00000396096 EGFRP00533 1210 aa18.36■□□□□ 0.53
NUP50-202ENST00000396096 KLRC1P26715 233 aa18.36■□□□□ 0.53
NUP50-202ENST00000396096 ARID5AQ03989 594 aa18.36■□□□□ 0.53
NUP50-202ENST00000396096 MAP9Q49MG5 647 aa18.36■□□□□ 0.53
NUP50-202ENST00000396096 MUM1L1Q5H9M0 696 aa18.36■□□□□ 0.53
NUP50-202ENST00000396096 NFRKBQ6P4R8 1299 aa18.36■□□□□ 0.53
NUP50-202ENST00000396096 PADI6Q6TGC4 694 aa18.36■□□□□ 0.53
NUP50-202ENST00000396096 ZNF571Q7Z3V5 609 aaPredicted RBP18.36■□□□□ 0.53
NUP50-202ENST00000396096 DRC1Q96MC2 740 aa18.36■□□□□ 0.53
NUP50-202ENST00000396096 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.36■□□□□ 0.53
NUP50-202ENST00000396096 RAVER2Q9HCJ3 691 aaKnown RBP18.36■□□□□ 0.53
NUP50-202ENST00000396096 TBC1D22BQ9NU19 505 aa18.36■□□□□ 0.53
NUP50-202ENST00000396096 BUB1O43683 1085 aa18.35■□□□□ 0.53
NUP50-202ENST00000396096 VCAM1P19320 739 aa18.35■□□□□ 0.53
NUP50-202ENST00000396096 COG2Q14746 738 aa18.35■□□□□ 0.53
NUP50-202ENST00000396096 IKZF4Q9H2S9 585 aa18.35■□□□□ 0.53
NUP50-202ENST00000396096 ZHX2Q9Y6X8 837 aa18.35■□□□□ 0.53
NUP50-202ENST00000396096 DDX39AO00148 427 aaKnown RBP18.35■□□□□ 0.53
NUP50-202ENST00000396096 EIF3JO75822 258 aaKnown RBP18.35■□□□□ 0.53
NUP50-202ENST00000396096 FLOT1O75955 427 aa18.35■□□□□ 0.53
NUP50-202ENST00000396096 GFPT2O94808 682 aa18.35■□□□□ 0.53
NUP50-202ENST00000396096 FMO5P49326 533 aa18.35■□□□□ 0.53
NUP50-202ENST00000396096 C2orf54Q08AI8 447 aa18.35■□□□□ 0.53
NUP50-202ENST00000396096 MTMR1Q13613 665 aa18.35■□□□□ 0.53
NUP50-202ENST00000396096 CASP8Q14790 479 aa18.35■□□□□ 0.53
NUP50-202ENST00000396096 KIAA0753Q2KHM9 967 aa18.35■□□□□ 0.53
NUP50-202ENST00000396096 CCDC70Q6NSX1 233 aa18.35■□□□□ 0.53
NUP50-202ENST00000396096 CPXCR1Q8N123 301 aa18.35■□□□□ 0.53
NUP50-202ENST00000396096 SPATA4Q8NEY3 305 aa18.35■□□□□ 0.53
NUP50-202ENST00000396096 TIPINQ9BVW5 301 aa18.35■□□□□ 0.53
NUP50-202ENST00000396096 ZMYND15Q9H091 742 aa18.35■□□□□ 0.53
NUP50-202ENST00000396096 VIPAS39Q9H9C1 493 aa18.35■□□□□ 0.53
NUP50-202ENST00000396096 AJAP1Q9UKB5 411 aaPredicted RBP18.35■□□□□ 0.53
NUP50-202ENST00000396096 FRMD4BQ9Y2L6 1034 aa18.35■□□□□ 0.53
NUP50-202ENST00000396096 LTBP3Q9NS15 1303 aa18.34■□□□□ 0.53
NUP50-202ENST00000396096 ZBED4O75132 1171 aa18.34■□□□□ 0.53
NUP50-202ENST00000396096 PALMO75781 387 aa18.34■□□□□ 0.53
NUP50-202ENST00000396096 FERP16591 822 aa18.34■□□□□ 0.53
NUP50-202ENST00000396096 QARSP47897 775 aaKnown RBP18.34■□□□□ 0.53
NUP50-202ENST00000396096 RARRES1P49788 294 aa18.34■□□□□ 0.53
NUP50-202ENST00000396096 RPS6P62753 249 aaKnown RBP18.34■□□□□ 0.53
NUP50-202ENST00000396096 GPS2Q13227 327 aa18.34■□□□□ 0.53
NUP50-202ENST00000396096 PGM5Q15124 567 aa18.34■□□□□ 0.53
NUP50-202ENST00000396096 KSR1Q8IVT5 923 aa18.34■□□□□ 0.53
NUP50-202ENST00000396096 C12orf56Q8IXR9 622 aa18.34■□□□□ 0.53
NUP50-202ENST00000396096 TAAR1Q96RJ0 339 aa18.34■□□□□ 0.53
NUP50-202ENST00000396096 LARSQ9P2J5 1176 aaKnown RBP18.34■□□□□ 0.53
NUP50-202ENST00000396096 SCAF8Q9UPN6 1271 aaKnown RBP18.34■□□□□ 0.53
NUP50-202ENST00000396096 RLFQ13129 1914 aa18.34■□□□□ 0.53
NUP50-202ENST00000396096 NCK2O43639 380 aa18.33■□□□□ 0.53
NUP50-202ENST00000396096 MEI1Q5TIA1 1274 aa18.33■□□□□ 0.53
NUP50-202ENST00000396096 XRRA1Q6P2D8 792 aa18.33■□□□□ 0.53
NUP50-202ENST00000396096 PACSIN1Q9BY11 444 aa18.33■□□□□ 0.53
NUP50-202ENST00000396096 ST6GALNAC4Q9H4F1 302 aa18.33■□□□□ 0.53
NUP50-202ENST00000396096 RPAP3Q9H6T3 665 aaPredicted RBP18.33■□□□□ 0.53
NUP50-202ENST00000396096 TMEM206Q9H813 350 aa18.33■□□□□ 0.53
NUP50-202ENST00000396096 SUGCTQ9HAC7 445 aa18.33■□□□□ 0.53
NUP50-202ENST00000396096 ZNF112Q9UJU3 913 aa18.33■□□□□ 0.53
NUP50-202ENST00000396096 NAGPAQ9UK23 515 aa18.33■□□□□ 0.53
NUP50-202ENST00000396096 PAFAH1B1P43034 410 aa18.33■□□□□ 0.52
NUP50-202ENST00000396096 NAP1L1P55209 391 aaKnown RBP18.33■□□□□ 0.52
NUP50-202ENST00000396096 MTMR2Q13614 643 aa18.33■□□□□ 0.52
NUP50-202ENST00000396096 CCNI2Q6ZMN8 369 aaPredicted RBP18.33■□□□□ 0.52
NUP50-202ENST00000396096 MICALL2Q8IY33 904 aa18.33■□□□□ 0.52
NUP50-202ENST00000396096 C4orf19Q8IY42 314 aa18.33■□□□□ 0.52
NUP50-202ENST00000396096 STK33Q9BYT3 514 aa18.33■□□□□ 0.52
NUP50-202ENST00000396096 PKD2L1Q9P0L9 805 aa18.33■□□□□ 0.52
NUP50-202ENST00000396096 HACL1Q9UJ83 578 aa18.33■□□□□ 0.52
NUP50-202ENST00000396096 PRDM4Q9UKN5 801 aa18.33■□□□□ 0.52
NUP50-202ENST00000396096 INTUQ9ULD6 942 aa18.33■□□□□ 0.52
NUP50-202ENST00000396096 H3BQF6 201 aa18.32■□□□□ 0.52
NUP50-202ENST00000396096 K7ENM7 598 aa18.32■□□□□ 0.52
NUP50-202ENST00000396096 PLS3P13797 630 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms