RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 NFIAQ12857 509 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 KRT31Q15323 416 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 PCNX4Q63HM2 1172 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 PAF1Q8N7H5 531 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 ZDBF2Q9HCK1 2354 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 TRIOBPQ9H2D6 2365 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 MEIS1O00470 390 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 POLR3GO15318 223 aaPredicted RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 RTP1P59025 263 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 MTMR2Q13614 643 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 NR1I3Q14994 352 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 EAPPQ56P03 285 aaPredicted RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 NT5DC4Q86YG4 428 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 CD302Q8IX05 232 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 EIF2AK1Q9BQI3 630 aaKnown RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 RPAP3Q9H6T3 665 aaPredicted RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 PRMT7Q9NVM4 692 aaPredicted RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 PPFIA4O75335 1185 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 STK10O94804 968 aaKnown RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 NR3C1P04150 777 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 CACNB3P54284 484 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 ANGEL2Q5VTE6 544 aaKnown RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 ZNF771Q7L3S4 317 aaPredicted RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 TAOK1Q7L7X3 1001 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 ANKRD36BP1Q96IX9 119 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 IL17RBQ9NRM6 502 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 KCNH7Q9NS40 1196 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 TAB2Q9NYJ8 693 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 MFAP3LO75121 409 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 NEBLO76041 1014 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 CYP2D6P10635 497 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 GTF2H1P32780 548 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 PPM1KQ8N3J5 372 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 MRPL4Q9BYD3 311 aaKnown RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 FTOQ9C0B1 505 aaKnown RBP eCLIP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 BLZF1Q9H2G9 400 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 GGA3Q9NZ52 723 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 H0YHG0 523 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 VCAM1P19320 739 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 EIF2AK2P19525 551 aaKnown RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 SLC18A3Q16572 532 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 SYT10Q6XYQ8 523 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 MIGA2Q7L4E1 593 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 HOMEZQ8IX15 550 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 CCDC89Q8N998 374 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 RSPH1Q8WYR4 309 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 CCDC113Q9H0I3 377 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 FAM217BQ9NTX9 383 aaPredicted RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 RNF181Q9P0P0 153 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 TXNDC16Q9P2K2 825 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 A0A1B0GUL6 1792 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 GOLGA6CA6NDK9 693 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 GOLGA6BA6NDN3 693 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 RRN3P2A6NIE6 340 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 GOLGA6DP0CG33 693 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 LACTBP83111 547 aaPredicted RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 ARID5AQ03989 594 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 IRF5Q13568 498 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 CUL1Q13616 776 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 TBC1D10BQ4KMP7 808 aaPredicted RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 TRAPPC11Q7Z392 1133 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 HAUS6Q7Z4H7 955 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 DAAM2Q86T65 1068 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 FBXL13Q8NEE6 735 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 DYDC1Q8WWB3 177 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 GOLGA6AQ9NYA3 693 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 PUF60Q9UHX1 559 aaKnown RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 CUL9Q8IWT3 2517 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 SHMT1P34896 483 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 PRCPP42785 496 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 EZH2Q15910 746 aaKnown RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 PKN1Q16512 942 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 ALKBH5Q6P6C2 394 aaKnown RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 ZNF365Q70YC5 407 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 RASGRP2Q7LDG7 609 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 ADGRA1Q86SQ6 560 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 DHX38Q92620 1227 aaKnown RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 COL1A1P02452 1464 aaPredicted RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 GTF2A2P52657 109 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 C11orf57Q6ZUT1 292 aaPredicted RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 SPATS2Q86XZ4 545 aaKnown RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 C4orf19Q8IY42 314 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 ATP2A3Q93084 1043 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 STK33Q9BYT3 514 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 SLC9A2Q9UBY0 812 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 TTC28Q96AY4 2481 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 KPNA6O60684 536 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 SKIP12755 728 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 DPEP1P16444 411 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 SARNPP82979 210 aaKnown RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 TRMT44Q8IYL2 757 aaKnown RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 STAMQ92783 540 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 FAXDC2Q96IV6 333 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 GPRC5DQ9NZD1 345 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 CALCOCO1Q9P1Z2 691 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 CTTNBP2NLQ9P2B4 639 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 DBR1Q9UK59 544 aaKnown RBP3.67□□□□□ -1.82
VPS13C-203ENST00000395896 MAPK13O15264 365 aa3.67□□□□□ -1.82
VPS13C-203ENST00000395896 HBP1O60381 514 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms