RNA–Protein interactions for RNA: ENST00000395636.6

PHACTR3-205, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 1 (best) BASIC

Gene PHACTR3, Length 2,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-205ENST00000395636 C6orf89Q6UWU4 347 aa13.05□□□□□ -0.32
PHACTR3-205ENST00000395636 CRELD2Q6UXH1 353 aaPredicted RBP13.05□□□□□ -0.32
PHACTR3-205ENST00000395636 SLC30A10Q6XR72 485 aa13.05□□□□□ -0.32
PHACTR3-205ENST00000395636 ZNF513Q8N8E2 541 aaPredicted RBP13.05□□□□□ -0.32
PHACTR3-205ENST00000395636 RETREG2Q8NC44 543 aa13.05□□□□□ -0.32
PHACTR3-205ENST00000395636 ZNF280CQ8ND82 737 aa13.05□□□□□ -0.32
PHACTR3-205ENST00000395636 TRIM58Q8NG06 486 aa13.05□□□□□ -0.32
PHACTR3-205ENST00000395636 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.05□□□□□ -0.32
PHACTR3-205ENST00000395636 CYP2W1Q8TAV3 490 aa13.05□□□□□ -0.32
PHACTR3-205ENST00000395636 CCHCR1Q8TD31 782 aa13.05□□□□□ -0.32
PHACTR3-205ENST00000395636 CLMNQ96JQ2 1002 aa13.05□□□□□ -0.32
PHACTR3-205ENST00000395636 NAP1L4Q99733 375 aaKnown RBP13.05□□□□□ -0.32
PHACTR3-205ENST00000395636 GLT8D2Q9H1C3 349 aa13.05□□□□□ -0.32
PHACTR3-205ENST00000395636 PICK1Q9NRD5 415 aa13.05□□□□□ -0.32
PHACTR3-205ENST00000395636 HOMER2Q9NSB8 354 aa13.05□□□□□ -0.32
PHACTR3-205ENST00000395636 TRPC6Q9Y210 931 aa13.05□□□□□ -0.32
PHACTR3-205ENST00000395636 TTC26A0AVF1 554 aa13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 GLTPD2A6NH11 291 aa13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 MGRN1O60291 552 aa13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 FLOT1O75955 427 aa13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 RTN3O95197 1032 aaPredicted RBP13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 CFBP00751 764 aa13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 BACE1P56817 501 aa13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 UNC13DQ70J99 1090 aa13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 NLRP14Q86W24 1093 aa13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 LDHDQ86WU2 507 aa13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 MFN1Q8IWA4 741 aa13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 KIRREL3Q8IZU9 778 aa13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 ACRBPQ8NEB7 543 aa13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 CHURC1Q8WUH1 139 aa13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 LARP4BQ92615 738 aaKnown RBP13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 L3MBTL3Q96JM7 780 aaPredicted RBP13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 CCT8L2Q96SF2 557 aa13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 DNAJC7Q99615 494 aa13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 ANO3Q9BYT9 981 aa13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 BLOC1S4Q9NUP1 217 aa13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 CHCHD3Q9NX63 227 aaKnown RBP13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 FEM1BQ9UK73 627 aa13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 EPN1Q9Y6I3 576 aaPredicted RBP13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 RLFQ13129 1914 aa13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 COL11A1P12107 1806 aaPredicted RBP13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 PARP14Q460N5 1801 aa13.04□□□□□ -0.32
PHACTR3-205ENST00000395636 ENO4A6NNW6 628 aa13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 BUB1BO60566 1050 aaPredicted RBP13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 PPP1R37O75864 691 aa13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 FCER1AP12319 257 aa13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 XRCC4Q13426 336 aa13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 PTGISQ16647 500 aa13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 MIS18BP1Q6P0N0 1132 aa13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 CNOT6LQ96LI5 555 aaKnown RBP13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 GDAP1L1Q96MZ0 367 aa13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 PNMA5Q96PV4 448 aa13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 EBF2Q9HAK2 575 aa13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 RAVER2Q9HCJ3 691 aaKnown RBP13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 SAR1BQ9Y6B6 198 aa13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 SNCAIPQ9Y6H5 919 aa13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 PITPNM2Q9BZ72 1349 aa13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 B4DLN1 442 aa13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 FGFR1OPO95684 399 aaKnown RBP13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 TFRCP02786 760 aaKnown RBP13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 MTIF2P46199 727 aaKnown RBP13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 TBC1D25Q3MII6 688 aa13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 SUPT20HL1Q3ZLR7 823 aa13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 SLC30A9Q6PML9 568 aa13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 SND1Q7KZF4 910 aaKnown RBP eCLIP13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 BZW1Q7L1Q6 419 aaKnown RBP13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 SNX29Q8TEQ0 813 aa13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 RAD54LQ92698 747 aa13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 SLF1Q9BQI6 1058 aa13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 DDX25Q9UHL0 483 aaKnown RBP13.03□□□□□ -0.32
PHACTR3-205ENST00000395636 POTEMA6NI47 508 aa13.02□□□□□ -0.32
PHACTR3-205ENST00000395636 MYMKA6NI61 221 aa13.02□□□□□ -0.32
PHACTR3-205ENST00000395636 NFIBO00712 420 aa13.02□□□□□ -0.32
PHACTR3-205ENST00000395636 WDR46O15213 610 aaKnown RBP13.02□□□□□ -0.32
PHACTR3-205ENST00000395636 MARCH6O60337 910 aa13.02□□□□□ -0.32
PHACTR3-205ENST00000395636 NDUFA10O95299 355 aa13.02□□□□□ -0.32
PHACTR3-205ENST00000395636 CENPPQ6IPU0 288 aa13.02□□□□□ -0.32
PHACTR3-205ENST00000395636 KIAA0895Q8NCT3 520 aa13.02□□□□□ -0.32
PHACTR3-205ENST00000395636 EHBP1Q8NDI1 1231 aa13.02□□□□□ -0.32
PHACTR3-205ENST00000395636 MYCBPAPQ8TBZ2 947 aa13.02□□□□□ -0.32
PHACTR3-205ENST00000395636 HAS1Q92839 578 aa13.02□□□□□ -0.32
PHACTR3-205ENST00000395636 ATG4CQ96DT6 458 aa13.02□□□□□ -0.32
PHACTR3-205ENST00000395636 IQCDQ96DY2 449 aa13.02□□□□□ -0.32
PHACTR3-205ENST00000395636 TAF1DQ9H5J8 278 aaPredicted RBP13.02□□□□□ -0.32
PHACTR3-205ENST00000395636 SLC39A2Q9NP94 309 aa13.02□□□□□ -0.32
PHACTR3-205ENST00000395636 A0A0U1RQJ8 604 aa13.02□□□□□ -0.33
PHACTR3-205ENST00000395636 TRAF5O00463 557 aa13.02□□□□□ -0.33
PHACTR3-205ENST00000395636 PPFIA2O75334 1257 aa13.02□□□□□ -0.33
PHACTR3-205ENST00000395636 SMNDC1O75940 238 aaKnown RBP eCLIP13.02□□□□□ -0.33
PHACTR3-205ENST00000395636 SSBP05455 408 aaKnown RBP eCLIP13.02□□□□□ -0.33
PHACTR3-205ENST00000395636 MTA1Q13330 715 aa13.02□□□□□ -0.33
PHACTR3-205ENST00000395636 TMEM119Q4V9L6 283 aa13.02□□□□□ -0.33
PHACTR3-205ENST00000395636 CCDC181Q5TID7 509 aa13.02□□□□□ -0.33
PHACTR3-205ENST00000395636 NSMCE1Q8WV22 266 aa13.02□□□□□ -0.33
PHACTR3-205ENST00000395636 ATRIPQ8WXE1 791 aa13.02□□□□□ -0.33
PHACTR3-205ENST00000395636 LPAR1Q92633 364 aa13.02□□□□□ -0.33
PHACTR3-205ENST00000395636 CDCA5Q96FF9 252 aa13.02□□□□□ -0.33
PHACTR3-205ENST00000395636 PURBQ96QR8 312 aaKnown RBP13.02□□□□□ -0.33
PHACTR3-205ENST00000395636 CHP1Q99653 195 aa13.02□□□□□ -0.33
PHACTR3-205ENST00000395636 NUDT12Q9BQG2 462 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms