RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 SYCE3A1L190 88 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 SLFN14P0C7P3 912 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 CDC25AP30304 524 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 UBA7P41226 1012 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 UBXN2AP68543 259 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 SETQ01105 290 aaPredicted RBP12.8□□□□□ -0.36
RTN1-203ENST00000395090 TMEM266Q2M3C6 531 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 ARHGEF16Q5VV41 709 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 SLC5A5Q92911 643 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 IWS1Q96ST2 819 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 SDF4Q9BRK5 362 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 MMTAG2Q9BU76 263 aaKnown RBP12.8□□□□□ -0.36
RTN1-203ENST00000395090 PANK2Q9BZ23 570 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 JADE2Q9NQC1 790 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 DNAJC25-GNG10A0A024R161 153 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 PP2D1A8MPX8 630 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 IGF2BP3O00425 579 aaKnown RBP eCLIP12.8□□□□□ -0.36
RTN1-203ENST00000395090 MAFGO15525 162 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 STAM2O75886 525 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 EIF2AK2P19525 551 aaKnown RBP12.8□□□□□ -0.36
RTN1-203ENST00000395090 TM4SF4P48230 202 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 CCNA1P78396 465 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 SPIRE1Q08AE8 756 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 FAM26DQ5JW98 314 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 KANK3Q6NY19 840 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 LRSAM1Q6UWE0 723 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 PLA2G4DQ86XP0 818 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 ETFBKMTQ8IXQ9 262 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 FAM133AQ8N9E0 248 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 IQUBQ8NA54 791 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 FUCA2Q9BTY2 467 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 LRWD1Q9UFC0 647 aa12.8□□□□□ -0.36
RTN1-203ENST00000395090 RBBP6Q7Z6E9 1792 aaKnown RBP12.79□□□□□ -0.36
RTN1-203ENST00000395090 ADGRA2Q96PE1 1338 aa12.79□□□□□ -0.36
RTN1-203ENST00000395090 SOBPA7XYQ1 873 aa12.79□□□□□ -0.36
RTN1-203ENST00000395090 ZBTB39O15060 712 aa12.79□□□□□ -0.36
RTN1-203ENST00000395090 SLC26A4O43511 780 aa12.79□□□□□ -0.36
RTN1-203ENST00000395090 MARCH6O60337 910 aa12.79□□□□□ -0.36
RTN1-203ENST00000395090 PSMD10O75832 226 aa12.79□□□□□ -0.36
RTN1-203ENST00000395090 ARP10275 920 aa12.79□□□□□ -0.36
RTN1-203ENST00000395090 CNTN2Q02246 1040 aa12.79□□□□□ -0.36
RTN1-203ENST00000395090 FAM110CQ1W6H9 321 aa12.79□□□□□ -0.36
RTN1-203ENST00000395090 ANKRD13CQ8N6S4 541 aa12.79□□□□□ -0.36
RTN1-203ENST00000395090 PDILTQ8N807 584 aa12.79□□□□□ -0.36
RTN1-203ENST00000395090 CNNM3Q8NE01 707 aa12.79□□□□□ -0.36
RTN1-203ENST00000395090 GJA10Q969M2 543 aa12.79□□□□□ -0.36
RTN1-203ENST00000395090 SUSD3Q96L08 255 aa12.79□□□□□ -0.36
RTN1-203ENST00000395090 ZIC5Q96T25 663 aa12.79□□□□□ -0.36
RTN1-203ENST00000395090 RIT2Q99578 217 aa12.79□□□□□ -0.36
RTN1-203ENST00000395090 WDR11Q9BZH6 1224 aa12.79□□□□□ -0.36
RTN1-203ENST00000395090 PORCNQ9H237 461 aa12.79□□□□□ -0.36
RTN1-203ENST00000395090 GPAMQ9HCL2 828 aa12.79□□□□□ -0.36
RTN1-203ENST00000395090 KCNH7Q9NS40 1196 aa12.79□□□□□ -0.36
RTN1-203ENST00000395090 DCTN4Q9UJW0 460 aa12.79□□□□□ -0.36
RTN1-203ENST00000395090 VAV3Q9UKW4 847 aa12.79□□□□□ -0.36
RTN1-203ENST00000395090 ABT1Q9ULW3 272 aaKnown RBP12.79□□□□□ -0.36
RTN1-203ENST00000395090 ASTN1O14525 1302 aa12.78□□□□□ -0.36
RTN1-203ENST00000395090 STRNO43815 780 aa12.78□□□□□ -0.36
RTN1-203ENST00000395090 F11P03951 625 aa12.78□□□□□ -0.36
RTN1-203ENST00000395090 EDNRBP24530 442 aa12.78□□□□□ -0.36
RTN1-203ENST00000395090 MAPK1P28482 360 aa12.78□□□□□ -0.36
RTN1-203ENST00000395090 CCND2P30279 289 aa12.78□□□□□ -0.36
RTN1-203ENST00000395090 KARSQ15046 597 aaKnown RBP12.78□□□□□ -0.36
RTN1-203ENST00000395090 B3GNT9Q6UX72 402 aa12.78□□□□□ -0.36
RTN1-203ENST00000395090 OTOP1Q7RTM1 612 aa12.78□□□□□ -0.36
RTN1-203ENST00000395090 CABP7Q86V35 215 aa12.78□□□□□ -0.36
RTN1-203ENST00000395090 GAS2L3Q86XJ1 694 aa12.78□□□□□ -0.36
RTN1-203ENST00000395090 ABRAQ8N0Z2 381 aa12.78□□□□□ -0.36
RTN1-203ENST00000395090 INPP4AQ96PE3 977 aaPredicted RBP12.78□□□□□ -0.36
RTN1-203ENST00000395090 GAS2L1Q99501 681 aaPredicted RBP12.78□□□□□ -0.36
RTN1-203ENST00000395090 NEUROD4Q9HD90 331 aa12.78□□□□□ -0.36
RTN1-203ENST00000395090 DISC1Q9NRI5 854 aa12.78□□□□□ -0.36
RTN1-203ENST00000395090 ADD3Q9UEY8 706 aaKnown RBP12.78□□□□□ -0.36
RTN1-203ENST00000395090 CCDC39Q9UFE4 941 aa12.78□□□□□ -0.36
RTN1-203ENST00000395090 LOC102724159A0A0B4J2E5 919 aa12.77□□□□□ -0.36
RTN1-203ENST00000395090 TGFBR3LH3BV60 316 aa12.77□□□□□ -0.36
RTN1-203ENST00000395090 IPO5O00410 1097 aaKnown RBP12.77□□□□□ -0.36
RTN1-203ENST00000395090 DHX15O43143 795 aaKnown RBP12.77□□□□□ -0.36
RTN1-203ENST00000395090 FCER1AP12319 257 aa12.77□□□□□ -0.36
RTN1-203ENST00000395090 YY1P25490 414 aa12.77□□□□□ -0.36
RTN1-203ENST00000395090 SREBF2Q12772 1141 aa12.77□□□□□ -0.36
RTN1-203ENST00000395090 PPP2R5CQ13362 524 aa12.77□□□□□ -0.36
RTN1-203ENST00000395090 PWP2Q15269 919 aaKnown RBP12.77□□□□□ -0.36
RTN1-203ENST00000395090 NAALADL2Q58DX5 795 aa12.77□□□□□ -0.36
RTN1-203ENST00000395090 HYIQ5T013 277 aa12.77□□□□□ -0.36
RTN1-203ENST00000395090 RRAGBQ5VZM2 374 aa12.77□□□□□ -0.36
RTN1-203ENST00000395090 CKAP2LQ8IYA6 745 aa12.77□□□□□ -0.36
RTN1-203ENST00000395090 DHX58Q96C10 678 aa12.77□□□□□ -0.36
RTN1-203ENST00000395090 GPRASP2Q96D09 838 aa12.77□□□□□ -0.36
RTN1-203ENST00000395090 TRIM47Q96LD4 638 aa12.77□□□□□ -0.36
RTN1-203ENST00000395090 ZNF577Q9BSK1 485 aa12.77□□□□□ -0.36
RTN1-203ENST00000395090 CUEDC2Q9H467 287 aa12.77□□□□□ -0.36
RTN1-203ENST00000395090 AGO4Q9HCK5 861 aaKnown RBP12.77□□□□□ -0.36
RTN1-203ENST00000395090 HOOK1Q9UJC3 728 aaKnown RBP12.77□□□□□ -0.36
RTN1-203ENST00000395090 FSD2A1L4K1 749 aa12.77□□□□□ -0.37
RTN1-203ENST00000395090 EIF3JO75822 258 aaKnown RBP12.77□□□□□ -0.37
RTN1-203ENST00000395090 MYCLP12524 364 aaPredicted RBP12.77□□□□□ -0.37
RTN1-203ENST00000395090 MTMR1Q13613 665 aa12.77□□□□□ -0.37
RTN1-203ENST00000395090 KCTD2Q14681 263 aa12.77□□□□□ -0.37
RTN1-203ENST00000395090 NT5DC1Q5TFE4 455 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms