RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 TYW1BQ6NUM6 668 aa18.05■□□□□ 0.48
SNCA-205ENST00000394991 CASC1Q6TDU7 716 aa18.05■□□□□ 0.48
SNCA-205ENST00000394991 FAM43BQ6ZT52 329 aaPredicted RBP18.05■□□□□ 0.48
SNCA-205ENST00000394991 TMTC3Q6ZXV5 915 aa18.05■□□□□ 0.48
SNCA-205ENST00000394991 HEATR3Q7Z4Q2 680 aa18.05■□□□□ 0.48
SNCA-205ENST00000394991 CCDC60Q8IWA6 550 aaPredicted RBP18.05■□□□□ 0.48
SNCA-205ENST00000394991 CCDC82Q8N4S0 544 aa18.05■□□□□ 0.48
SNCA-205ENST00000394991 CASD1Q96PB1 797 aa18.05■□□□□ 0.48
SNCA-205ENST00000394991 POMKQ9H5K3 350 aa18.05■□□□□ 0.48
SNCA-205ENST00000394991 RNF216Q9NWF9 866 aaPredicted RBP18.05■□□□□ 0.48
SNCA-205ENST00000394991 RBM8AQ9Y5S9 174 aaKnown RBP18.05■□□□□ 0.48
SNCA-205ENST00000394991 PRR23AA6NEV1 266 aa18.04■□□□□ 0.48
SNCA-205ENST00000394991 DDX39AO00148 427 aaKnown RBP18.04■□□□□ 0.48
SNCA-205ENST00000394991 HOXB8P17481 243 aaPredicted RBP18.04■□□□□ 0.48
SNCA-205ENST00000394991 ATP4AP20648 1035 aa18.04■□□□□ 0.48
SNCA-205ENST00000394991 ODR4Q5SWX8 454 aa18.04■□□□□ 0.48
SNCA-205ENST00000394991 WWC2Q6AWC2 1192 aa18.04■□□□□ 0.48
SNCA-205ENST00000394991 KCNT2Q6UVM3 1135 aa18.04■□□□□ 0.48
SNCA-205ENST00000394991 ABHD15Q6UXT9 468 aa18.04■□□□□ 0.48
SNCA-205ENST00000394991 NFXL1Q6ZNB6 911 aa18.04■□□□□ 0.48
SNCA-205ENST00000394991 MAP4K1Q92918 833 aa18.04■□□□□ 0.48
SNCA-205ENST00000394991 MTA3Q9BTC8 594 aa18.04■□□□□ 0.48
SNCA-205ENST00000394991 TMEM117Q9H0C3 514 aa18.04■□□□□ 0.48
SNCA-205ENST00000394991 ELAC1Q9H777 363 aaKnown RBP18.04■□□□□ 0.48
SNCA-205ENST00000394991 NGRNQ9NPE2 291 aaKnown RBP18.04■□□□□ 0.48
SNCA-205ENST00000394991 PUF60Q9UHX1 559 aaKnown RBP18.04■□□□□ 0.48
SNCA-205ENST00000394991 SORCS3Q9UPU3 1222 aa18.04■□□□□ 0.48
SNCA-205ENST00000394991 NR2E1Q9Y466 385 aa18.04■□□□□ 0.48
SNCA-205ENST00000394991 DMDP11532 3685 aa18.04■□□□□ 0.48
SNCA-205ENST00000394991 VPS13AQ96RL7 3174 aa18.03■□□□□ 0.48
SNCA-205ENST00000394991 CCDC69A6NI79 296 aa18.03■□□□□ 0.48
SNCA-205ENST00000394991 BACH1O14867 736 aa18.03■□□□□ 0.48
SNCA-205ENST00000394991 GPR32O75388 356 aa18.03■□□□□ 0.48
SNCA-205ENST00000394991 C22orf31O95567 290 aa18.03■□□□□ 0.48
SNCA-205ENST00000394991 VTNP04004 478 aa18.03■□□□□ 0.48
SNCA-205ENST00000394991 NBL1P41271 181 aa18.03■□□□□ 0.48
SNCA-205ENST00000394991 CRYBB1P53674 252 aaPredicted RBP18.03■□□□□ 0.48
SNCA-205ENST00000394991 MTMR3Q13615 1198 aa18.03■□□□□ 0.48
SNCA-205ENST00000394991 CEP55Q53EZ4 464 aa18.03■□□□□ 0.48
SNCA-205ENST00000394991 EXOC6Q8TAG9 804 aa18.03■□□□□ 0.48
SNCA-205ENST00000394991 CASP10Q92851 521 aa18.03■□□□□ 0.48
SNCA-205ENST00000394991 ZNF558Q96NG5 402 aa18.03■□□□□ 0.48
SNCA-205ENST00000394991 ANO3Q9BYT9 981 aa18.03■□□□□ 0.48
SNCA-205ENST00000394991 HCFC2Q9Y5Z7 792 aa18.03■□□□□ 0.48
SNCA-205ENST00000394991 C2orf16Q68DN1 1984 aa18.02■□□□□ 0.48
SNCA-205ENST00000394991 CNTNAP5Q8WYK1 1306 aa18.02■□□□□ 0.48
SNCA-205ENST00000394991 MEIS1O00470 390 aa18.02■□□□□ 0.48
SNCA-205ENST00000394991 ZNF484Q5JVG2 852 aa18.02■□□□□ 0.48
SNCA-205ENST00000394991 FAM160B1Q5W0V3 765 aa18.02■□□□□ 0.48
SNCA-205ENST00000394991 TMC7Q7Z402 723 aa18.02■□□□□ 0.48
SNCA-205ENST00000394991 UBALD2Q8IYN6 164 aa18.02■□□□□ 0.48
SNCA-205ENST00000394991 LRRC43Q8N309 656 aa18.02■□□□□ 0.48
SNCA-205ENST00000394991 TMEM87BQ96K49 555 aa18.02■□□□□ 0.48
SNCA-205ENST00000394991 ADAM7Q9H2U9 754 aa18.02■□□□□ 0.48
SNCA-205ENST00000394991 ZNF302Q9NR11 478 aa18.02■□□□□ 0.48
SNCA-205ENST00000394991 CACNA1AO00555 2505 aa18.02■□□□□ 0.47
SNCA-205ENST00000394991 CLASP2O75122 1294 aaKnown RBP18.01■□□□□ 0.47
SNCA-205ENST00000394991 ASGR2P07307 311 aa18.01■□□□□ 0.47
SNCA-205ENST00000394991 WEE2P0C1S8 567 aa18.01■□□□□ 0.47
SNCA-205ENST00000394991 CALM1P0DP23 149 aa18.01■□□□□ 0.47
SNCA-205ENST00000394991 CALM2P0DP24 149 aa18.01■□□□□ 0.47
SNCA-205ENST00000394991 CALM3P0DP25 149 aa18.01■□□□□ 0.47
SNCA-205ENST00000394991 MCM5P33992 734 aa18.01■□□□□ 0.47
SNCA-205ENST00000394991 PPM1AP35813 382 aa18.01■□□□□ 0.47
SNCA-205ENST00000394991 LIFRP42702 1097 aa18.01■□□□□ 0.47
SNCA-205ENST00000394991 FOXK2Q01167 660 aa18.01■□□□□ 0.47
SNCA-205ENST00000394991 TPRNQ4KMQ1 711 aa18.01■□□□□ 0.47
SNCA-205ENST00000394991 CLLU1OSQ5K130 101 aa18.01■□□□□ 0.47
SNCA-205ENST00000394991 PDXDC2PQ6P474 469 aa18.01■□□□□ 0.47
SNCA-205ENST00000394991 SLC39A11Q8N1S5 342 aa18.01■□□□□ 0.47
SNCA-205ENST00000394991 TMTC2Q8N394 836 aa18.01■□□□□ 0.47
SNCA-205ENST00000394991 LRRC2Q9BYS8 371 aa18.01■□□□□ 0.47
SNCA-205ENST00000394991 RIC8AQ9NPQ8 531 aa18.01■□□□□ 0.47
SNCA-205ENST00000394991 SPG21Q9NZD8 308 aa18.01■□□□□ 0.47
SNCA-205ENST00000394991 DCHS1Q96JQ0 3298 aa18.01■□□□□ 0.47
SNCA-205ENST00000394991 C2orf71A6NGG8 1288 aa18■□□□□ 0.47
SNCA-205ENST00000394991 DHX15O43143 795 aaKnown RBP18■□□□□ 0.47
SNCA-205ENST00000394991 SREBF1P36956 1147 aa18■□□□□ 0.47
SNCA-205ENST00000394991 CES5AQ6NT32 575 aa18■□□□□ 0.47
SNCA-205ENST00000394991 SWSAP1Q6NVH7 229 aa18■□□□□ 0.47
SNCA-205ENST00000394991 MICU3Q86XE3 530 aa18■□□□□ 0.47
SNCA-205ENST00000394991 ECHDC2Q86YB7 292 aa18■□□□□ 0.47
SNCA-205ENST00000394991 MRPL43Q8N983 215 aaKnown RBP18■□□□□ 0.47
SNCA-205ENST00000394991 FANCBQ8NB91 859 aa18■□□□□ 0.47
SNCA-205ENST00000394991 FEZF2Q8TBJ5 459 aa18■□□□□ 0.47
SNCA-205ENST00000394991 NECTIN4Q96NY8 510 aa18■□□□□ 0.47
SNCA-205ENST00000394991 HOXA2O43364 376 aa17.99■□□□□ 0.47
SNCA-205ENST00000394991 FOSP01100 380 aaPredicted RBP17.99■□□□□ 0.47
SNCA-205ENST00000394991 CLCN3P51790 818 aa17.99■□□□□ 0.47
SNCA-205ENST00000394991 ADCY7P51828 1080 aa17.99■□□□□ 0.47
SNCA-205ENST00000394991 NAPAP54920 295 aa17.99■□□□□ 0.47
SNCA-205ENST00000394991 KRT17Q04695 432 aa17.99■□□□□ 0.47
SNCA-205ENST00000394991 ITIH3Q06033 890 aa17.99■□□□□ 0.47
SNCA-205ENST00000394991 SMC1AQ14683 1233 aaKnown RBP17.99■□□□□ 0.47
SNCA-205ENST00000394991 ASTLQ6HA08 431 aaPredicted RBP17.99■□□□□ 0.47
SNCA-205ENST00000394991 KANK3Q6NY19 840 aa17.99■□□□□ 0.47
SNCA-205ENST00000394991 NIPA1Q7RTP0 329 aa17.99■□□□□ 0.47
SNCA-205ENST00000394991 FRMD5Q7Z6J6 570 aa17.99■□□□□ 0.47
SNCA-205ENST00000394991 C12orf76Q8N812 135 aaPredicted RBP17.99■□□□□ 0.47
SNCA-205ENST00000394991 SLC12A7Q9Y666 1083 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms