RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 RNF19AQ9NV58 838 aa10.01□□□□□ -0.81
ATG4A-205ENST00000394892 HCSTQ9UBK5 93 aa10.01□□□□□ -0.81
ATG4A-205ENST00000394892 FAM50BQ9Y247 325 aa10.01□□□□□ -0.81
ATG4A-205ENST00000394892 BDP1A6H8Y1 2624 aa10.01□□□□□ -0.81
ATG4A-205ENST00000394892 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10□□□□□ -0.81
ATG4A-205ENST00000394892 PRR33A8MZF0 331 aa10□□□□□ -0.81
ATG4A-205ENST00000394892 C9IYK1 514 aa10□□□□□ -0.81
ATG4A-205ENST00000394892 GRM6O15303 877 aa10□□□□□ -0.81
ATG4A-205ENST00000394892 GAS7O60861 476 aa10□□□□□ -0.81
ATG4A-205ENST00000394892 OATP04181 439 aa10□□□□□ -0.81
ATG4A-205ENST00000394892 KCNA5P22460 613 aa10□□□□□ -0.81
ATG4A-205ENST00000394892 DNAJB1P25685 340 aa10□□□□□ -0.81
ATG4A-205ENST00000394892 BMPR1AP36894 532 aa10□□□□□ -0.81
ATG4A-205ENST00000394892 FAM189BP81408 668 aa10□□□□□ -0.81
ATG4A-205ENST00000394892 SPIRE1Q08AE8 756 aa10□□□□□ -0.81
ATG4A-205ENST00000394892 NONOQ15233 471 aaKnown RBP eCLIP10□□□□□ -0.81
ATG4A-205ENST00000394892 LEXMQ3ZCV2 418 aa10□□□□□ -0.81
ATG4A-205ENST00000394892 C8orf34Q49A92 452 aa10□□□□□ -0.81
ATG4A-205ENST00000394892 GALNT17Q6IS24 598 aa10□□□□□ -0.81
ATG4A-205ENST00000394892 MOXD1Q6UVY6 613 aa10□□□□□ -0.81
ATG4A-205ENST00000394892 FAM177A1Q8N128 213 aaPredicted RBP10□□□□□ -0.81
ATG4A-205ENST00000394892 GTF3C6Q969F1 213 aa10□□□□□ -0.81
ATG4A-205ENST00000394892 OSMRQ99650 979 aa10□□□□□ -0.81
ATG4A-205ENST00000394892 TEKT3Q9BXF9 490 aa10□□□□□ -0.81
ATG4A-205ENST00000394892 ORC3Q9UBD5 711 aaPredicted RBP10□□□□□ -0.81
ATG4A-205ENST00000394892 ST3GAL5Q9UNP4 418 aa10□□□□□ -0.81
ATG4A-205ENST00000394892 GINS2Q9Y248 185 aa10□□□□□ -0.81
ATG4A-205ENST00000394892 MRPL42Q9Y6G3 142 aaKnown RBP10□□□□□ -0.81
ATG4A-205ENST00000394892 NCOR1O75376 2440 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 TCF20Q9UGU0 1960 aaKnown RBP9.99□□□□□ -0.81
ATG4A-205ENST00000394892 IGKV6-21A0A0C4DH24 114 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 FAM86C2PA6NEL3 165 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 C5orf67F2Z3F1 127 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 ZBTB39O15060 712 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 CSDE1O75534 798 aaKnown RBP9.99□□□□□ -0.81
ATG4A-205ENST00000394892 FGFR4P22455 802 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 NEK4P51957 841 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 CRYBB1P53674 252 aaPredicted RBP9.99□□□□□ -0.81
ATG4A-205ENST00000394892 NFX1Q12986 1120 aaKnown RBP9.99□□□□□ -0.81
ATG4A-205ENST00000394892 PAK2Q13177 524 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 GPM6BQ13491 265 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 COL19A1Q14993 1142 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 LETM2Q2VYF4 491 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 FAM102BQ5T8I3 360 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 EFCAB12Q6NXP0 572 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 PIK3AP1Q6ZUJ8 805 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 ANO5Q75V66 913 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 MIER3Q7Z3K6 550 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 KRT25Q7Z3Z0 450 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 CKAP2LQ8IYA6 745 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 FIBCD1Q8N539 461 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 METTL13Q8N6R0 699 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 BANK1Q8NDB2 785 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 MRPL38Q96DV4 380 aaKnown RBP9.99□□□□□ -0.81
ATG4A-205ENST00000394892 SAMD11Q96NU1 681 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 ADAM2Q99965 735 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 NIFKQ9BYG3 293 aaKnown RBP9.99□□□□□ -0.81
ATG4A-205ENST00000394892 CD320Q9NPF0 282 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 DDX25Q9UHL0 483 aaKnown RBP9.99□□□□□ -0.81
ATG4A-205ENST00000394892 SAMM50Q9Y512 469 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 ADGRA3Q8IWK6 1321 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 COL4A4P53420 1690 aaPredicted RBP9.99□□□□□ -0.81
ATG4A-205ENST00000394892 MICAL3Q7RTP6 2002 aa9.99□□□□□ -0.81
ATG4A-205ENST00000394892 BTBD18B2RXH4 712 aa9.98□□□□□ -0.81
ATG4A-205ENST00000394892 RPS6KA5O75582 802 aa9.98□□□□□ -0.81
ATG4A-205ENST00000394892 RPLP2P05387 115 aaKnown RBP9.98□□□□□ -0.81
ATG4A-205ENST00000394892 SFNP31947 248 aa9.98□□□□□ -0.81
ATG4A-205ENST00000394892 GTF2F1P35269 517 aaKnown RBP eCLIP9.98□□□□□ -0.81
ATG4A-205ENST00000394892 GPC3P51654 580 aa9.98□□□□□ -0.81
ATG4A-205ENST00000394892 JAK3P52333 1124 aa9.98□□□□□ -0.81
ATG4A-205ENST00000394892 FOSBP53539 338 aa9.98□□□□□ -0.81
ATG4A-205ENST00000394892 NPEPPSP55786 919 aa9.98□□□□□ -0.81
ATG4A-205ENST00000394892 NLRP11P59045 1033 aaKnown RBP9.98□□□□□ -0.81
ATG4A-205ENST00000394892 PPP2R5CQ13362 524 aa9.98□□□□□ -0.81
ATG4A-205ENST00000394892 PAN2Q504Q3 1202 aaKnown RBP9.98□□□□□ -0.81
ATG4A-205ENST00000394892 TIGD5Q53EQ6 642 aa9.98□□□□□ -0.81
ATG4A-205ENST00000394892 TCEAL5Q5H9L2 206 aa9.98□□□□□ -0.81
ATG4A-205ENST00000394892 PPP4R3AQ6IN85 833 aa9.98□□□□□ -0.81
ATG4A-205ENST00000394892 PTCRAQ6ISU1 281 aaPredicted RBP9.98□□□□□ -0.81
ATG4A-205ENST00000394892 CPLX2Q6PUV4 134 aaKnown RBP9.98□□□□□ -0.81
ATG4A-205ENST00000394892 EP400NLQ6ZTU2 488 aa9.98□□□□□ -0.81
ATG4A-205ENST00000394892 NEK8Q86SG6 692 aa9.98□□□□□ -0.81
ATG4A-205ENST00000394892 NPAS4Q8IUM7 802 aa9.98□□□□□ -0.81
ATG4A-205ENST00000394892 FAM178BQ8IXR5 827 aa9.98□□□□□ -0.81
ATG4A-205ENST00000394892 RDM1Q8NG50 284 aa9.98□□□□□ -0.81
ATG4A-205ENST00000394892 KHSRPQ92945 711 aaKnown RBP eCLIP9.98□□□□□ -0.81
ATG4A-205ENST00000394892 TNPO1Q92973 898 aaKnown RBP9.98□□□□□ -0.81
ATG4A-205ENST00000394892 C22orf23Q9BZE7 217 aa9.98□□□□□ -0.81
ATG4A-205ENST00000394892 RGS18Q9NS28 235 aa9.98□□□□□ -0.81
ATG4A-205ENST00000394892 RGL1Q9NZL6 768 aa9.98□□□□□ -0.81
ATG4A-205ENST00000394892 PCDHGC5Q9Y5F6 944 aa9.98□□□□□ -0.81
ATG4A-205ENST00000394892 MAGEB2O15479 319 aa9.97□□□□□ -0.81
ATG4A-205ENST00000394892 NCK2O43639 380 aa9.97□□□□□ -0.81
ATG4A-205ENST00000394892 CDKL5O76039 1030 aa9.97□□□□□ -0.81
ATG4A-205ENST00000394892 ITGB1P05556 798 aa9.97□□□□□ -0.81
ATG4A-205ENST00000394892 FGFR1P11362 822 aa9.97□□□□□ -0.81
ATG4A-205ENST00000394892 DARSP14868 501 aaKnown RBP9.97□□□□□ -0.81
ATG4A-205ENST00000394892 ATF7P17544 494 aaPredicted RBP9.97□□□□□ -0.81
ATG4A-205ENST00000394892 CTNNB1P35222 781 aa9.97□□□□□ -0.81
ATG4A-205ENST00000394892 IRS1P35568 1242 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms