RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 RABEP2Q9H5N1 569 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 PPANQ9NQ55 473 aaKnown RBP10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 NYAP2Q9P242 653 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 SYNGAP1Q96PV0 1343 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 POTEFA5A3E0 1075 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 MPHOSPH10O00566 681 aaKnown RBP10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 PPFIA2O75334 1257 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 GCNT3O95395 438 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 POTEIP0CG38 1075 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 GHRP10912 638 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 DRG2P55039 364 aaKnown RBP10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 HDLBPQ00341 1268 aaKnown RBP10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 IFT88Q13099 833 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 BYSLQ13895 437 aaKnown RBP10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 PPP2R5AQ15172 486 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 QRICH1Q2TAL8 776 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 FBXW10Q5XX13 1052 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 DPY19L2P1Q6NXN4 242 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 POTEGQ6S5H5 508 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 POTEEQ6S8J3 1075 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 HS2ST1Q7LGA3 356 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 GPIHBP1Q8IV16 184 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 ANKS4BQ8N8V4 417 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 ETNPPLQ8TBG4 499 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 MORC4Q8TE76 937 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 U2AF1L4Q8WU68 220 aaKnown RBP10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 MKL1Q969V6 931 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 SLC35C1Q96A29 364 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 CCDC114Q96M63 670 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 CRAMP1Q96RY5 1269 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 AP1M1Q9BXS5 423 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 FGFBP2Q9BYJ0 223 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 DDX47Q9H0S4 455 aaKnown RBP10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 TUFT1Q9NNX1 390 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 KCND2Q9NZV8 630 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 MTRF1LQ9UGC7 380 aaKnown RBP10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 RABGAP1Q9Y3P9 1069 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 TAF1LQ8IZX4 1826 aa10.91□□□□□ -0.66
UBE2D3-208ENST00000394803 NPHP3-ACAD11A0A0J9YXS1 232 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 F8VZ95 297 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 PODXLO00592 558 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 FAM13AO94988 1023 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 NUDT17P0C025 328 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 ACTN1P12814 892 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 CIITAP33076 1130 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 SREBF1P36956 1147 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 HADHBP55084 474 aaKnown RBP10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 DHX9Q08211 1270 aaKnown RBP10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 UAP1Q16222 522 aaPredicted RBP10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 FAM186BQ8IYM0 893 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 CCDC24Q8N4L8 307 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 UBL4BQ8N7F7 174 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 TBC1D16Q8TBP0 767 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 FBXO41Q8TF61 875 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 NSRP1Q9H0G5 558 aaKnown RBP10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 KANSL2Q9H9L4 492 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 BCCIPQ9P287 314 aaKnown RBP eCLIP10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 FRMD4BQ9Y2L6 1034 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 LRRC37AA6NMS7 1700 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 SPATA31A6Q5VVP1 1343 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 MYO1FO00160 1098 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 DAPK3O43293 454 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 AKAP3O75969 853 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 ZBTB48P10074 688 aaPredicted RBP10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 HMGB2P26583 209 aaKnown RBP10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 SHMT1P34896 483 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 GALCP54803 685 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 EIF6P56537 245 aaKnown RBP10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 DR1Q01658 176 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 CACNB1Q02641 598 aaPredicted RBP10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 SPIRE1Q08AE8 756 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 CETN1Q12798 172 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 PABPC4Q13310 644 aaKnown RBP eCLIP10.9□□□□□ -0.661e-7■■■□□ 18.6
UBE2D3-208ENST00000394803 MYBPC2Q14324 1141 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 LACTB2Q53H82 288 aaPredicted RBP10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 PRR16Q569H4 304 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 HHIPL2Q6UWX4 724 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 CPLX4Q7Z7G2 160 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 CCDC13Q8IYE1 715 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 RBM46Q8TBY0 533 aaKnown RBP10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 EHMT1Q9H9B1 1298 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 SIX2Q9NPC8 291 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 AMACRQ9UHK6 382 aa10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 NOVA2Q9UNW9 492 aaKnown RBP10.9□□□□□ -0.66
UBE2D3-208ENST00000394803 ASTN1O14525 1302 aa10.9□□□□□ -0.67
UBE2D3-208ENST00000394803 LY75O60449 1722 aa10.89□□□□□ -0.67
UBE2D3-208ENST00000394803 ANKRD62A6NC57 917 aa10.89□□□□□ -0.67
UBE2D3-208ENST00000394803 C6orf229H3BNL8 230 aa10.89□□□□□ -0.67
UBE2D3-208ENST00000394803 DDX3XO00571 662 aaKnown RBP eCLIP10.89□□□□□ -0.672e-17■■■■□ 23.8
UBE2D3-208ENST00000394803 FGGP02679 453 aa10.89□□□□□ -0.67
UBE2D3-208ENST00000394803 BCRP11274 1271 aa10.89□□□□□ -0.67
UBE2D3-208ENST00000394803 TNFAIP3P21580 790 aa10.89□□□□□ -0.67
UBE2D3-208ENST00000394803 HOXA10P31260 410 aaPredicted RBP10.89□□□□□ -0.67
UBE2D3-208ENST00000394803 CHRNA3P32297 505 aa10.89□□□□□ -0.67
UBE2D3-208ENST00000394803 SEC24CP53992 1094 aa10.89□□□□□ -0.67
UBE2D3-208ENST00000394803 ADCY2Q08462 1091 aa10.89□□□□□ -0.67
UBE2D3-208ENST00000394803 NBPF9Q3BBW0 867 aa10.89□□□□□ -0.67
UBE2D3-208ENST00000394803 DENND2CQ68D51 928 aa10.89□□□□□ -0.67
UBE2D3-208ENST00000394803 TTBK2Q6IQ55 1244 aa10.89□□□□□ -0.67
UBE2D3-208ENST00000394803 PRR5LQ6MZQ0 368 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms