RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 DHX15O43143 795 aaKnown RBP12.2□□□□□ -0.46
TCOF1-203ENST00000394269 TLR2O60603 784 aa12.2□□□□□ -0.46
TCOF1-203ENST00000394269 VAV2P52735 878 aa12.2□□□□□ -0.46
TCOF1-203ENST00000394269 MKRN3Q13064 507 aaKnown RBP12.2□□□□□ -0.46
TCOF1-203ENST00000394269 PCNX4Q63HM2 1172 aa12.2□□□□□ -0.46
TCOF1-203ENST00000394269 APOBEC3FQ8IUX4 373 aaKnown RBP12.2□□□□□ -0.46
TCOF1-203ENST00000394269 KLRG1Q96E93 195 aa12.2□□□□□ -0.46
TCOF1-203ENST00000394269 CEP72Q9P209 647 aa12.2□□□□□ -0.46
TCOF1-203ENST00000394269 GABBR1Q9UBS5 961 aa12.2□□□□□ -0.46
TCOF1-203ENST00000394269 TRAF3IP3Q9Y228 551 aa12.2□□□□□ -0.46
TCOF1-203ENST00000394269 CAPN6Q9Y6Q1 641 aa12.2□□□□□ -0.46
TCOF1-203ENST00000394269 GREB1LQ9C091 1923 aaPredicted RBP12.2□□□□□ -0.46
TCOF1-203ENST00000394269 COL2A1P02458 1487 aaPredicted RBP12.19□□□□□ -0.46
TCOF1-203ENST00000394269 CCNE2O96020 404 aa12.19□□□□□ -0.46
TCOF1-203ENST00000394269 PSMC2P35998 433 aaKnown RBP12.19□□□□□ -0.46
TCOF1-203ENST00000394269 NOP2P46087 812 aaKnown RBP12.19□□□□□ -0.46
TCOF1-203ENST00000394269 ASIC2Q16515 512 aa12.19□□□□□ -0.46
TCOF1-203ENST00000394269 PPP4R3CPQ6ZMV5 832 aa12.19□□□□□ -0.46
TCOF1-203ENST00000394269 CCDC127Q96BQ5 260 aa12.19□□□□□ -0.46
TCOF1-203ENST00000394269 OTUD5Q96G74 571 aa12.19□□□□□ -0.46
TCOF1-203ENST00000394269 GDAP1L1Q96MZ0 367 aa12.19□□□□□ -0.46
TCOF1-203ENST00000394269 SMARCAL1Q9NZC9 954 aa12.19□□□□□ -0.46
TCOF1-203ENST00000394269 FAM184BQ9ULE4 1060 aa12.19□□□□□ -0.46
TCOF1-203ENST00000394269 UCHL3P15374 230 aa12.19□□□□□ -0.46
TCOF1-203ENST00000394269 RARRES1P49788 294 aa12.19□□□□□ -0.46
TCOF1-203ENST00000394269 CNTN2Q02246 1040 aa12.19□□□□□ -0.46
TCOF1-203ENST00000394269 KIAA0753Q2KHM9 967 aa12.19□□□□□ -0.46
TCOF1-203ENST00000394269 SUPT20HL1Q3ZLR7 823 aa12.19□□□□□ -0.46
TCOF1-203ENST00000394269 FIGNQ5HY92 759 aa12.19□□□□□ -0.46
TCOF1-203ENST00000394269 STXBP4Q6ZWJ1 553 aa12.19□□□□□ -0.46
TCOF1-203ENST00000394269 EPM2AIP1Q7L775 607 aaPredicted RBP12.19□□□□□ -0.46
TCOF1-203ENST00000394269 SULF1Q8IWU6 871 aa12.19□□□□□ -0.46
TCOF1-203ENST00000394269 CEP112Q8N8E3 955 aa12.19□□□□□ -0.46
TCOF1-203ENST00000394269 NOA1Q8NC60 698 aaKnown RBP12.19□□□□□ -0.46
TCOF1-203ENST00000394269 CEP170P1Q96L14 293 aa12.19□□□□□ -0.46
TCOF1-203ENST00000394269 TACC1O75410 805 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 ZSCAN20P17040 1043 aaPredicted RBP12.18□□□□□ -0.46
TCOF1-203ENST00000394269 PON1P27169 355 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 GBP6Q6ZN66 633 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 NCAPG2Q86XI2 1143 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 ZSWIM2Q8NEG5 633 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 SYT17Q9BSW7 474 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 PACSIN1Q9BY11 444 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 AGPAT3Q9NRZ7 376 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 ZNF446Q9NWS9 450 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 UBIAD1Q9Y5Z9 338 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 A0A087X0T9 212 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 LRRN2O75325 713 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 GFPT2O94808 682 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 FAM228BP0C875 321 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 FRMD5Q7Z6J6 570 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 DHX37Q8IY37 1157 aaKnown RBP12.18□□□□□ -0.46
TCOF1-203ENST00000394269 DAW1Q8N136 415 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 SLC35C1Q96A29 364 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 DCPSQ96C86 337 aaKnown RBP12.18□□□□□ -0.46
TCOF1-203ENST00000394269 MMS19Q96T76 1030 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 CBWD1Q9BRT8 395 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 GOLPH3Q9H4A6 298 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 ELP3Q9H9T3 547 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 ST7Q9NRC1 585 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 OLFML3Q9NRN5 406 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 TBC1D22BQ9NU19 505 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 PACSIN2Q9UNF0 486 aaPredicted RBP12.18□□□□□ -0.46
TCOF1-203ENST00000394269 LMNB1P20700 586 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 FSTL1Q12841 308 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 VGLL4Q14135 290 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 KCTD19Q17RG1 926 aaPredicted RBP12.18□□□□□ -0.46
TCOF1-203ENST00000394269 TREML2Q5T2D2 321 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 NSUN6Q8TEA1 469 aaKnown RBP12.18□□□□□ -0.46
TCOF1-203ENST00000394269 EHD2Q9NZN4 543 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 SALL4Q9UJQ4 1053 aa12.18□□□□□ -0.46
TCOF1-203ENST00000394269 CCND2P30279 289 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 DSG3P32926 999 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 PTK2Q05397 1052 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 TEX13BQ9BXU2 312 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 METTL14Q9HCE5 456 aaKnown RBP12.17□□□□□ -0.46
TCOF1-203ENST00000394269 A1CFQ9NQ94 594 aaKnown RBP12.17□□□□□ -0.46
TCOF1-203ENST00000394269 CSADQ9Y600 493 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 WDR64B1ANS9 1081 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 FTCDO95954 541 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 SERPING1P05155 500 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 GCLMP48507 274 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 CYFIP1Q7L576 1253 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 HAUS6Q7Z4H7 955 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 CCDC125Q86Z20 511 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 GPR161Q8N6U8 529 aaKnown RBP12.17□□□□□ -0.46
TCOF1-203ENST00000394269 EHBP1Q8NDI1 1231 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 SAAL1Q96ER3 474 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 FAM84AQ96KN4 292 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 MYO1AQ9UBC5 1043 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 SEPT9Q9UHD8 586 aaPredicted RBP12.17□□□□□ -0.46
TCOF1-203ENST00000394269 DLG4P78352 724 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 KLHDC7AQ5VTJ3 777 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 HGSNATQ68CP4 663 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 NFRKBQ6P4R8 1299 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 GPC2Q8N158 579 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 CLMNQ96JQ2 1002 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 SUGCTQ9HAC7 445 aa12.17□□□□□ -0.46
TCOF1-203ENST00000394269 ZNF214Q9UL59 606 aaPredicted RBP12.17□□□□□ -0.46
TCOF1-203ENST00000394269 POLR3GO15318 223 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms