RNA–Protein interactions for RNA: ENST00000393820.2

NPM1-203, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-203ENST00000393820 HOXA10P31260 410 aaPredicted RBP6.35□□□□□ -1.39
NPM1-203ENST00000393820 CCNFP41002 786 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 NFKB2Q00653 900 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 TERF2Q15554 542 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 CRY2Q49AN0 593 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 CT47A1Q5JQC4 288 aaPredicted RBP6.35□□□□□ -1.39
NPM1-203ENST00000393820 FAM209AQ5JX71 171 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 CCDC73Q6ZRK6 1079 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 ZNF771Q7L3S4 317 aaPredicted RBP6.35□□□□□ -1.39
NPM1-203ENST00000393820 PPFIBP1Q86W92 1011 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 CCAR1Q8IX12 1150 aaKnown RBP6.35□□□□□ -1.39
NPM1-203ENST00000393820 CCDC144CPQ8IYA2 1237 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 SLFN12Q8IYM2 578 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 CEP57L1Q8IYX8 460 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 CCAR2Q8N163 923 aaKnown RBP6.35□□□□□ -1.39
NPM1-203ENST00000393820 FBXL16Q8N461 479 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 UBR7Q8N806 425 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 ENGASEQ8NFI3 743 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 BRF1Q92994 677 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 CLUHP3Q96NS8 147 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 DHRS4Q9BTZ2 278 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 TARS2Q9BW92 718 aaKnown RBP6.35□□□□□ -1.39
NPM1-203ENST00000393820 AGXT2Q9BYV1 514 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 TAF1DQ9H5J8 278 aaPredicted RBP6.35□□□□□ -1.39
NPM1-203ENST00000393820 L2HGDHQ9H9P8 463 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 HACL1Q9UJ83 578 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 NIP7Q9Y221 180 aaKnown RBP eCLIP6.35□□□□□ -1.39
NPM1-203ENST00000393820 CCDC88AQ3V6T2 1871 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 CNTNAP1P78357 1384 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 CCDC69A6NI79 296 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 ATP8B1O43520 1251 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 MYO1BO43795 1136 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 KINO60870 393 aaKnown RBP6.35□□□□□ -1.39
NPM1-203ENST00000393820 DDNO94850 711 aaPredicted RBP6.35□□□□□ -1.39
NPM1-203ENST00000393820 TPM1P09493 284 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 PMS1P54277 932 aaKnown RBP6.35□□□□□ -1.39
NPM1-203ENST00000393820 TPM4P67936 248 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 CCZ1BP86790 482 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 CCZ1P86791 482 aaPredicted RBP6.35□□□□□ -1.39
NPM1-203ENST00000393820 SNW1Q13573 536 aaKnown RBP6.35□□□□□ -1.39
NPM1-203ENST00000393820 BBS9Q3SYG4 887 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 MCMDC2Q4G0Z9 681 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 EXOSC6Q5RKV6 272 aaKnown RBP6.35□□□□□ -1.39
NPM1-203ENST00000393820 ADALQ6DHV7 355 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 Q6ZUG5 572 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 C12orf40Q86WS4 652 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 DHX40Q8IX18 779 aaKnown RBP6.35□□□□□ -1.39
NPM1-203ENST00000393820 TMEM130Q8N3G9 435 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 CCDC150Q8NCX0 1101 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 ZNF274Q96GC6 653 aaPredicted RBP6.35□□□□□ -1.39
NPM1-203ENST00000393820 MEGF10Q96KG7 1140 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 SLC6A18Q96N87 628 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 UBL7Q96S82 380 aaPredicted RBP6.35□□□□□ -1.39
NPM1-203ENST00000393820 TMPRSS13Q9BYE2 586 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 CCDC8Q9H0W5 538 aaPredicted RBP6.35□□□□□ -1.39
NPM1-203ENST00000393820 TMX4Q9H1E5 349 aaPredicted RBP6.35□□□□□ -1.39
NPM1-203ENST00000393820 BOLA2Q9H3K6 86 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 DDX21Q9NR30 783 aaKnown RBP eCLIP6.35□□□□□ -1.39
NPM1-203ENST00000393820 PA2G4Q9UQ80 394 aaKnown RBP6.35□□□□□ -1.39
NPM1-203ENST00000393820 RNF114Q9Y508 228 aa6.35□□□□□ -1.39
NPM1-203ENST00000393820 BCORQ6W2J9 1755 aa6.34□□□□□ -1.39
NPM1-203ENST00000393820 SLX4Q8IY92 1834 aa6.34□□□□□ -1.39
NPM1-203ENST00000393820 TRAV20A0A0B4J274 112 aa6.34□□□□□ -1.39
NPM1-203ENST00000393820 RASSF10A6NK89 507 aa6.34□□□□□ -1.39
NPM1-203ENST00000393820 IARSP41252 1262 aaKnown RBP6.34□□□□□ -1.39
NPM1-203ENST00000393820 CTCFP49711 727 aaPredicted RBP6.34□□□□□ -1.39
NPM1-203ENST00000393820 MAP2K1Q02750 393 aaPredicted RBP6.34□□□□□ -1.39
NPM1-203ENST00000393820 NEXNQ0ZGT2 675 aa6.34□□□□□ -1.39
NPM1-203ENST00000393820 SV2CQ496J9 727 aa6.34□□□□□ -1.39
NPM1-203ENST00000393820 KIF6Q6ZMV9 814 aa6.34□□□□□ -1.39
NPM1-203ENST00000393820 TMEM192Q8IY95 271 aa6.34□□□□□ -1.39
NPM1-203ENST00000393820 C12orf50Q8NA57 414 aaPredicted RBP6.34□□□□□ -1.39
NPM1-203ENST00000393820 KAZALD1Q96I82 304 aa6.34□□□□□ -1.39
NPM1-203ENST00000393820 SUCLG2Q96I99 432 aa6.34□□□□□ -1.39
NPM1-203ENST00000393820 C8orf48Q96LL4 319 aa6.34□□□□□ -1.39
NPM1-203ENST00000393820 CRAMP1Q96RY5 1269 aa6.34□□□□□ -1.39
NPM1-203ENST00000393820 CDC6Q99741 560 aa6.34□□□□□ -1.39
NPM1-203ENST00000393820 WDR18Q9BV38 432 aa6.34□□□□□ -1.39
NPM1-203ENST00000393820 DSCC1Q9BVC3 393 aa6.34□□□□□ -1.39
NPM1-203ENST00000393820 MRPL4Q9BYD3 311 aaKnown RBP6.34□□□□□ -1.39
NPM1-203ENST00000393820 WNT10AQ9GZT5 417 aa6.34□□□□□ -1.39
NPM1-203ENST00000393820 RNF208Q9H0X6 261 aa6.34□□□□□ -1.39
NPM1-203ENST00000393820 BICC1Q9H694 974 aaKnown RBP6.34□□□□□ -1.39
NPM1-203ENST00000393820 HELLSQ9NRZ9 838 aa6.34□□□□□ -1.39
NPM1-203ENST00000393820 RAD18Q9NS91 495 aa6.34□□□□□ -1.39
NPM1-203ENST00000393820 INTS7Q9NVH2 962 aaKnown RBP6.34□□□□□ -1.39
NPM1-203ENST00000393820 RTEL1Q9NZ71 1219 aa6.34□□□□□ -1.39
NPM1-203ENST00000393820 ZNF215Q9UL58 517 aaPredicted RBP6.34□□□□□ -1.39
NPM1-203ENST00000393820 HIF3AQ9Y2N7 669 aa6.34□□□□□ -1.39
NPM1-203ENST00000393820 CSADQ9Y600 493 aa6.34□□□□□ -1.39
NPM1-203ENST00000393820 TRBV23-1A0A0A0MS06 115 aa6.33□□□□□ -1.4
NPM1-203ENST00000393820 LOC102724159A0A0B4J2E5 919 aa6.33□□□□□ -1.4
NPM1-203ENST00000393820 ANKRD34BA5PLL1 514 aa6.33□□□□□ -1.4
NPM1-203ENST00000393820 TPD52L2O43399 206 aaKnown RBP6.33□□□□□ -1.4
NPM1-203ENST00000393820 KCNQ3O43525 872 aa6.33□□□□□ -1.4
NPM1-203ENST00000393820 AOC2O75106 756 aa6.33□□□□□ -1.4
NPM1-203ENST00000393820 COL11A2P13942 1736 aaPredicted RBP6.33□□□□□ -1.4
NPM1-203ENST00000393820 H2AFXP16104 143 aaPredicted RBP6.33□□□□□ -1.4
NPM1-203ENST00000393820 TAL1P17542 331 aaPredicted RBP6.33□□□□□ -1.4
NPM1-203ENST00000393820 NTF4P34130 210 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms