RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 TTI1O43156 1089 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 ATP1A1P05023 1023 aaKnown RBP14.07□□□□□ -0.16
LCA5-202ENST00000392959 PSMA2P25787 234 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 CCND2P30279 289 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 ORC2Q13416 577 aaPredicted RBP14.07□□□□□ -0.16
LCA5-202ENST00000392959 SPOUT1Q5T280 376 aaKnown RBP14.07□□□□□ -0.16
LCA5-202ENST00000392959 SCARA5Q6ZMJ2 495 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 TMEM179Q6ZVK1 233 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 SH3RF3Q8TEJ3 882 aaPredicted RBP14.07□□□□□ -0.16
LCA5-202ENST00000392959 ATP6V1G3Q96LB4 118 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 CCDC138Q96M89 665 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 CYTH2Q99418 400 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 IRX2Q9BZI1 471 aaPredicted RBP14.07□□□□□ -0.16
LCA5-202ENST00000392959 KCNF1Q9H3M0 494 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 DCP1AQ9NPI6 582 aaPredicted RBP14.07□□□□□ -0.16
LCA5-202ENST00000392959 ANGPTL3Q9Y5C1 460 aa14.07□□□□□ -0.16
LCA5-202ENST00000392959 GNGT2O14610 69 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 KCNQ4P56696 695 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 ZNF211Q13398 564 aaPredicted RBP14.06□□□□□ -0.16
LCA5-202ENST00000392959 KNOP1Q1ED39 458 aaKnown RBP14.06□□□□□ -0.16
LCA5-202ENST00000392959 METTL16Q86W50 562 aaKnown RBP14.06□□□□□ -0.16
LCA5-202ENST00000392959 SULF1Q8IWU6 871 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 TMEM35BQ8NCS4 154 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 DEPDC1BQ8WUY9 529 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 EDEM3Q9BZQ6 932 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 ZWILCHQ9H900 591 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 PCDHA6Q9UN73 950 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 PCDHA8Q9Y5H6 950 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 NCAPD2Q15021 1401 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 PBRM1Q86U86 1689 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 PP2D1A8MPX8 630 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 USP17L15C9J2P7 530 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 USP17L13C9JLJ4 530 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 USP17L11C9JVI0 530 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 USP17L18D6R9N7 530 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 USP17L22D6RA61 530 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 USP17L17D6RBQ6 530 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 USP17L19D6RCP7 530 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 USP17L20D6RJB6 530 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 LMNAP02545 664 aaKnown RBP14.06□□□□□ -0.16
LCA5-202ENST00000392959 S100BP04271 92 aaPredicted RBP14.06□□□□□ -0.16
LCA5-202ENST00000392959 BRAFP15056 766 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 USP17L24Q0WX57 530 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 USP17L6PQ6QN14 398 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 CLEC4GQ6UXB4 293 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 NLRP14Q86W24 1093 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 PIP4K2CQ8TBX8 421 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 FAM20AQ96MK3 541 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 MRPL46Q9H2W6 279 aaKnown RBP14.06□□□□□ -0.16
LCA5-202ENST00000392959 NMT2O60551 498 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 APOEP02649 317 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 ATP2C1P98194 919 aaPredicted RBP14.06□□□□□ -0.16
LCA5-202ENST00000392959 MYO1EQ12965 1108 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 TARSL2A2RTX5 802 aaKnown RBP14.06□□□□□ -0.16
LCA5-202ENST00000392959 WDR64B1ANS9 1081 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 CHRNA3P32297 505 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 CCZ1BP86790 482 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 CCZ1P86791 482 aaPredicted RBP14.06□□□□□ -0.16
LCA5-202ENST00000392959 TFDP2Q14188 446 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 STOX1Q6ZVD7 989 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 EPM2AIP1Q7L775 607 aaPredicted RBP14.06□□□□□ -0.16
LCA5-202ENST00000392959 TTC13Q8NBP0 860 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 CALR3Q96L12 384 aaKnown RBP14.06□□□□□ -0.16
LCA5-202ENST00000392959 HEXIM2Q96MH2 286 aaKnown RBP14.06□□□□□ -0.16
LCA5-202ENST00000392959 SLITRK6Q9H5Y7 841 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 STOML1Q9UBI4 398 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 CAPN11Q9UMQ6 739 aa14.06□□□□□ -0.16
LCA5-202ENST00000392959 POTEB3A0JP26 581 aa14.05□□□□□ -0.16
LCA5-202ENST00000392959 GSG1L2A8MUP6 293 aa14.05□□□□□ -0.16
LCA5-202ENST00000392959 POTECB2RU33 542 aa14.05□□□□□ -0.16
LCA5-202ENST00000392959 KRT38O76015 456 aa14.05□□□□□ -0.16
LCA5-202ENST00000392959 LDHAP00338 332 aaKnown RBP14.05□□□□□ -0.16
LCA5-202ENST00000392959 POTEBQ6S5H4 581 aa14.05□□□□□ -0.16
LCA5-202ENST00000392959 SAMD9LQ8IVG5 1584 aa14.05□□□□□ -0.16
LCA5-202ENST00000392959 MYO5CQ9NQX4 1742 aa14.05□□□□□ -0.16
LCA5-202ENST00000392959 NBPF10Q6P3W6 841 aaKnown RBP14.05□□□□□ -0.16
LCA5-202ENST00000392959 BZW1Q7L1Q6 419 aaKnown RBP14.05□□□□□ -0.16
LCA5-202ENST00000392959 HIPK4Q8NE63 616 aa14.05□□□□□ -0.16
LCA5-202ENST00000392959 FAF2Q96CS3 445 aa14.05□□□□□ -0.16
LCA5-202ENST00000392959 KLC2Q9H0B6 622 aa14.05□□□□□ -0.16
LCA5-202ENST00000392959 TMEM60Q9H2L4 133 aa14.05□□□□□ -0.16
LCA5-202ENST00000392959 MLXIPLQ9NP71 852 aa14.05□□□□□ -0.16
LCA5-202ENST00000392959 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.05□□□□□ -0.16
LCA5-202ENST00000392959 FAM187AA6NFU0 413 aa14.05□□□□□ -0.16
LCA5-202ENST00000392959 SNAP25P60880 206 aa14.05□□□□□ -0.16
LCA5-202ENST00000392959 EXOSC10Q01780 885 aaKnown RBP14.05□□□□□ -0.16
LCA5-202ENST00000392959 TMTC4Q5T4D3 741 aa14.05□□□□□ -0.16
LCA5-202ENST00000392959 ST13P4Q8IZP2 240 aaPredicted RBP14.05□□□□□ -0.16
LCA5-202ENST00000392959 TTC25Q96NG3 672 aa14.05□□□□□ -0.16
LCA5-202ENST00000392959 COA1Q9GZY4 146 aa14.05□□□□□ -0.16
LCA5-202ENST00000392959 UPF3AQ9H1J1 476 aaKnown RBP14.05□□□□□ -0.16
LCA5-202ENST00000392959 SPAG7O75391 227 aa14.05□□□□□ -0.16
LCA5-202ENST00000392959 DRAP1Q14919 205 aaPredicted RBP14.05□□□□□ -0.16
LCA5-202ENST00000392959 ZNF667Q5HYK9 610 aa14.05□□□□□ -0.16
LCA5-202ENST00000392959 SLC44A5Q8NCS7 719 aa14.05□□□□□ -0.16
LCA5-202ENST00000392959 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.05□□□□□ -0.16
LCA5-202ENST00000392959 BARHL2Q9NY43 387 aa14.05□□□□□ -0.16
LCA5-202ENST00000392959 GRM4Q14833 912 aa14.04□□□□□ -0.16
LCA5-202ENST00000392959 CDO1Q16878 200 aa14.04□□□□□ -0.16
LCA5-202ENST00000392959 ZNF394Q53GI3 561 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms