RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 FTHL17Q9BXU8 183 aa12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 TSPYL2Q9H2G4 693 aaPredicted RBP12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 TMEM60Q9H2L4 133 aa12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 ADAMTS10Q9H324 1103 aa12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 RC3H2Q9HBD1 1191 aaKnown RBP12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 NOC2LQ9Y3T9 749 aaKnown RBP12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 KIAA1671Q9BY89 1806 aa12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 ATG2AQ2TAZ0 1938 aa12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 COL4A4P53420 1690 aaPredicted RBP12.8□□□□□ -0.36
IGHV4-28-201ENST00000390612 TMEM150BA6NC51 233 aa12.79□□□□□ -0.36
IGHV4-28-201ENST00000390612 NEMFO60524 1076 aa12.79□□□□□ -0.36
IGHV4-28-201ENST00000390612 MAFO75444 373 aaPredicted RBP12.79□□□□□ -0.36
IGHV4-28-201ENST00000390612 BAG4O95429 457 aaKnown RBP12.79□□□□□ -0.36
IGHV4-28-201ENST00000390612 VTNP04004 478 aa12.79□□□□□ -0.36
IGHV4-28-201ENST00000390612 MCM2P49736 904 aa12.79□□□□□ -0.36
IGHV4-28-201ENST00000390612 CLCN3P51790 818 aa12.79□□□□□ -0.36
IGHV4-28-201ENST00000390612 ERVK-21P61565 698 aa12.79□□□□□ -0.36
IGHV4-28-201ENST00000390612 ORC2Q13416 577 aaPredicted RBP12.79□□□□□ -0.36
IGHV4-28-201ENST00000390612 C4orf19Q8IY42 314 aa12.79□□□□□ -0.36
IGHV4-28-201ENST00000390612 LRRC71Q8N4P6 559 aa12.79□□□□□ -0.36
IGHV4-28-201ENST00000390612 METTL13Q8N6R0 699 aa12.79□□□□□ -0.36
IGHV4-28-201ENST00000390612 BANK1Q8NDB2 785 aa12.79□□□□□ -0.36
IGHV4-28-201ENST00000390612 MAFAQ8NHW3 353 aaPredicted RBP12.79□□□□□ -0.36
IGHV4-28-201ENST00000390612 RGL1Q9NZL6 768 aa12.79□□□□□ -0.36
IGHV4-28-201ENST00000390612 PCDHA12Q9UN75 941 aa12.79□□□□□ -0.36
IGHV4-28-201ENST00000390612 DDX11L8A8MPP1 907 aa12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 MGEA5O60502 916 aa12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 LPXNO60711 386 aa12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 DKC1O60832 514 aaKnown RBP eCLIP12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 SLITRK3O94933 977 aa12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 LYPLA2O95372 231 aa12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 LINC00271P0C7V0 271 aa12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 TMOD1P28289 359 aa12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 TRAPPC10P48553 1259 aa12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 NLRP11P59045 1033 aaKnown RBP12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 TBC1D8BQ0IIM8 1120 aa12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 DRP2Q13474 957 aa12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 DSC3Q14574 896 aa12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 CALCRLQ16602 461 aa12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 KIZQ2M2Z5 673 aa12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 FAM117BQ6P1L5 589 aa12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 FAM228AQ86W67 206 aa12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 NOSTRINQ8IVI9 506 aa12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 C4orf32Q8N8J7 132 aa12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 ZNF579Q8NAF0 562 aaKnown RBP12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 FAM184AQ8NB25 1140 aa12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 ZNF689Q96CS4 500 aaPredicted RBP12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 GAS2L1Q99501 681 aaPredicted RBP12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 DHX33Q9H6R0 707 aaKnown RBP12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 TTC12Q9H892 705 aaPredicted RBP12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 SEPT9Q9UHD8 586 aaPredicted RBP12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 ST3GAL5Q9UNP4 418 aa12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 PPME1Q9Y570 386 aa12.78□□□□□ -0.36
IGHV4-28-201ENST00000390612 RFXAPO00287 272 aa12.77□□□□□ -0.37
IGHV4-28-201ENST00000390612 RPS6KA5O75582 802 aa12.77□□□□□ -0.37
IGHV4-28-201ENST00000390612 TOB1P50616 345 aaPredicted RBP12.77□□□□□ -0.37
IGHV4-28-201ENST00000390612 GPC3P51654 580 aa12.77□□□□□ -0.37
IGHV4-28-201ENST00000390612 FAM189BP81408 668 aa12.77□□□□□ -0.37
IGHV4-28-201ENST00000390612 PAK2Q13177 524 aa12.77□□□□□ -0.37
IGHV4-28-201ENST00000390612 TMEM266Q2M3C6 531 aa12.77□□□□□ -0.37
IGHV4-28-201ENST00000390612 MTERF2Q49AM1 385 aa12.77□□□□□ -0.37
IGHV4-28-201ENST00000390612 NCAPH2Q6IBW4 605 aa12.77□□□□□ -0.37
IGHV4-28-201ENST00000390612 DYDC2Q96IM9 177 aa12.77□□□□□ -0.37
IGHV4-28-201ENST00000390612 TGS1Q96RS0 853 aaKnown RBP12.77□□□□□ -0.37
IGHV4-28-201ENST00000390612 MAP7D2Q96T17 732 aa12.77□□□□□ -0.37
IGHV4-28-201ENST00000390612 OSMRQ99650 979 aa12.77□□□□□ -0.37
IGHV4-28-201ENST00000390612 EIF2AK1Q9BQI3 630 aaKnown RBP12.77□□□□□ -0.37
IGHV4-28-201ENST00000390612 SH2D3AQ9BRG2 576 aa12.77□□□□□ -0.37
IGHV4-28-201ENST00000390612 LXNQ9BS40 222 aa12.77□□□□□ -0.37
IGHV4-28-201ENST00000390612 ZSWIM4Q9H7M6 989 aa12.77□□□□□ -0.37
IGHV4-28-201ENST00000390612 CERS4Q9HA82 394 aa12.77□□□□□ -0.37
IGHV4-28-201ENST00000390612 SUGCTQ9HAC7 445 aa12.77□□□□□ -0.37
IGHV4-28-201ENST00000390612 CYP26B1Q9NR63 512 aa12.77□□□□□ -0.37
IGHV4-28-201ENST00000390612 C9IYK1 514 aa12.76□□□□□ -0.37
IGHV4-28-201ENST00000390612 ZBTB39O15060 712 aa12.76□□□□□ -0.37
IGHV4-28-201ENST00000390612 GPR182O15218 404 aa12.76□□□□□ -0.37
IGHV4-28-201ENST00000390612 MARCH6O60337 910 aa12.76□□□□□ -0.37
IGHV4-28-201ENST00000390612 DGKIO75912 1065 aa12.76□□□□□ -0.37
IGHV4-28-201ENST00000390612 UPP2O95045 317 aa12.76□□□□□ -0.37
IGHV4-28-201ENST00000390612 EIF4BP23588 611 aaKnown RBP12.76□□□□□ -0.37
IGHV4-28-201ENST00000390612 MCM7P33993 719 aa12.76□□□□□ -0.37
IGHV4-28-201ENST00000390612 TXKP42681 527 aa12.76□□□□□ -0.37
IGHV4-28-201ENST00000390612 NPEPPSP55786 919 aa12.76□□□□□ -0.37
IGHV4-28-201ENST00000390612 CDC42EP1Q00587 391 aa12.76□□□□□ -0.37
IGHV4-28-201ENST00000390612 CUL4AQ13619 759 aa12.76□□□□□ -0.37
IGHV4-28-201ENST00000390612 ODR4Q5SWX8 454 aa12.76□□□□□ -0.37
IGHV4-28-201ENST00000390612 PLA2G4FQ68DD2 849 aa12.76□□□□□ -0.37
IGHV4-28-201ENST00000390612 NEK9Q8TD19 979 aa12.76□□□□□ -0.37
IGHV4-28-201ENST00000390612 ARNTL2Q8WYA1 636 aa12.76□□□□□ -0.37
IGHV4-28-201ENST00000390612 RGS18Q9NS28 235 aa12.76□□□□□ -0.37
IGHV4-28-201ENST00000390612 AKT3Q9Y243 479 aa12.76□□□□□ -0.37
IGHV4-28-201ENST00000390612 GINS2Q9Y248 185 aa12.76□□□□□ -0.37
IGHV4-28-201ENST00000390612 MTCH2Q9Y6C9 303 aa12.76□□□□□ -0.37
IGHV4-28-201ENST00000390612 BDP1A6H8Y1 2624 aa12.75□□□□□ -0.37
IGHV4-28-201ENST00000390612 SPATA31C1P0DKV0 1188 aa12.75□□□□□ -0.37
IGHV4-28-201ENST00000390612 XRCC6P12956 609 aaKnown RBP eCLIP12.75□□□□□ -0.37
IGHV4-28-201ENST00000390612 DARSP14868 501 aaKnown RBP12.75□□□□□ -0.37
IGHV4-28-201ENST00000390612 ATP2B1P20020 1258 aa12.75□□□□□ -0.37
IGHV4-28-201ENST00000390612 YWHABP31946 246 aaKnown RBP12.75□□□□□ -0.37
IGHV4-28-201ENST00000390612 NFX1Q12986 1120 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms