RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 RNF19AQ9NV58 838 aa13.5□□□□□ -0.25
SOD1-202ENST00000389995 PUF60Q9UHX1 559 aaKnown RBP13.5□□□□□ -0.25
SOD1-202ENST00000389995 PCDHA6Q9UN73 950 aa13.5□□□□□ -0.25
SOD1-202ENST00000389995 LZTS1Q9Y250 596 aa13.5□□□□□ -0.25
SOD1-202ENST00000389995 PCDHA8Q9Y5H6 950 aa13.5□□□□□ -0.25
SOD1-202ENST00000389995 OTOGLQ3ZCN5 2332 aa13.5□□□□□ -0.25
SOD1-202ENST00000389995 MED19A0JLT2 244 aaPredicted RBP13.49□□□□□ -0.25
SOD1-202ENST00000389995 FSD2A1L4K1 749 aa13.49□□□□□ -0.25
SOD1-202ENST00000389995 DDX39AO00148 427 aaKnown RBP13.49□□□□□ -0.25
SOD1-202ENST00000389995 CLASP2O75122 1294 aaKnown RBP13.49□□□□□ -0.25
SOD1-202ENST00000389995 RPLP2P05387 115 aaKnown RBP13.49□□□□□ -0.25
SOD1-202ENST00000389995 RXRAP19793 462 aa13.49□□□□□ -0.25
SOD1-202ENST00000389995 PTH1RQ03431 593 aa13.49□□□□□ -0.25
SOD1-202ENST00000389995 ITGB3BPQ13352 177 aaPredicted RBP13.49□□□□□ -0.25
SOD1-202ENST00000389995 PLPPR4Q7Z2D5 763 aa13.49□□□□□ -0.25
SOD1-202ENST00000389995 TRMT1LQ7Z2T5 733 aaKnown RBP13.49□□□□□ -0.25
SOD1-202ENST00000389995 FAM228AQ86W67 206 aa13.49□□□□□ -0.25
SOD1-202ENST00000389995 NME8Q8N427 588 aa13.49□□□□□ -0.25
SOD1-202ENST00000389995 SRBD1Q8N5C6 995 aaKnown RBP13.49□□□□□ -0.25
SOD1-202ENST00000389995 AUTS2Q8WXX7 1259 aa13.49□□□□□ -0.25
SOD1-202ENST00000389995 CASP10Q92851 521 aa13.49□□□□□ -0.25
SOD1-202ENST00000389995 SPZ1Q9BXG8 430 aa13.49□□□□□ -0.25
SOD1-202ENST00000389995 C1orf112Q9NSG2 853 aa13.49□□□□□ -0.25
SOD1-202ENST00000389995 TMEM161AQ9NX61 479 aa13.49□□□□□ -0.25
SOD1-202ENST00000389995 SEC63Q9UGP8 760 aaKnown RBP13.49□□□□□ -0.25
SOD1-202ENST00000389995 KMT2BQ9UMN6 2715 aaPredicted RBP13.49□□□□□ -0.25
SOD1-202ENST00000389995 DOCK8Q8NF50 2099 aa13.49□□□□□ -0.25
SOD1-202ENST00000389995 DOCK6Q96HP0 2047 aa13.49□□□□□ -0.25
SOD1-202ENST00000389995 C2orf71A6NGG8 1288 aa13.48□□□□□ -0.25
SOD1-202ENST00000389995 NT5C1B-RDH14C9J2C7 533 aa13.48□□□□□ -0.25
SOD1-202ENST00000389995 E7EWF7 191 aa13.48□□□□□ -0.25
SOD1-202ENST00000389995 HIP1O00291 1037 aa13.48□□□□□ -0.25
SOD1-202ENST00000389995 VTNP04004 478 aa13.48□□□□□ -0.25
SOD1-202ENST00000389995 NPR3P17342 541 aa13.48□□□□□ -0.25
SOD1-202ENST00000389995 MCTP2Q6DN12 878 aa13.48□□□□□ -0.25
SOD1-202ENST00000389995 CHD1LQ86WJ1 897 aa13.48□□□□□ -0.25
SOD1-202ENST00000389995 ZNF654Q8IZM8 581 aa13.48□□□□□ -0.25
SOD1-202ENST00000389995 CCDC82Q8N4S0 544 aa13.48□□□□□ -0.25
SOD1-202ENST00000389995 MRPL43Q8N983 215 aaKnown RBP13.48□□□□□ -0.25
SOD1-202ENST00000389995 TDRD5Q8NAT2 981 aaKnown RBP13.48□□□□□ -0.25
SOD1-202ENST00000389995 RNF169Q8NCN4 708 aa13.48□□□□□ -0.25
SOD1-202ENST00000389995 CTCFLQ8NI51 663 aaPredicted RBP13.48□□□□□ -0.25
SOD1-202ENST00000389995 IGDCC4Q8TDY8 1250 aa13.48□□□□□ -0.25
SOD1-202ENST00000389995 ZNF668Q96K58 619 aaPredicted RBP13.48□□□□□ -0.25
SOD1-202ENST00000389995 ZNF558Q96NG5 402 aa13.48□□□□□ -0.25
SOD1-202ENST00000389995 OSBPL3Q9H4L5 887 aa13.48□□□□□ -0.25
SOD1-202ENST00000389995 NGRNQ9NPE2 291 aaKnown RBP13.48□□□□□ -0.25
SOD1-202ENST00000389995 SPDYE3A6NKU9 549 aa13.47□□□□□ -0.25
SOD1-202ENST00000389995 ZBTB42B2RXF5 422 aa13.47□□□□□ -0.25
SOD1-202ENST00000389995 GPR182O15218 404 aa13.47□□□□□ -0.25
SOD1-202ENST00000389995 CCNE2O96020 404 aa13.47□□□□□ -0.25
SOD1-202ENST00000389995 EPCAMP16422 314 aa13.47□□□□□ -0.25
SOD1-202ENST00000389995 CLCN5P51795 746 aa13.47□□□□□ -0.25
SOD1-202ENST00000389995 FAM189BP81408 668 aa13.47□□□□□ -0.25
SOD1-202ENST00000389995 KRT17Q04695 432 aa13.47□□□□□ -0.25
SOD1-202ENST00000389995 ITIH3Q06033 890 aa13.47□□□□□ -0.25
SOD1-202ENST00000389995 COL9A3Q14050 684 aaPredicted RBP13.47□□□□□ -0.25
SOD1-202ENST00000389995 DSC3Q14574 896 aa13.47□□□□□ -0.25
SOD1-202ENST00000389995 SMC1AQ14683 1233 aaKnown RBP13.47□□□□□ -0.25
SOD1-202ENST00000389995 RALYLQ86SE5 291 aaKnown RBP13.47□□□□□ -0.25
SOD1-202ENST00000389995 RMDN1Q96DB5 314 aa13.47□□□□□ -0.25
SOD1-202ENST00000389995 NECTIN4Q96NY8 510 aa13.47□□□□□ -0.25
SOD1-202ENST00000389995 MXRA8Q9BRK3 442 aa13.47□□□□□ -0.25
SOD1-202ENST00000389995 SDF4Q9BRK5 362 aa13.47□□□□□ -0.25
SOD1-202ENST00000389995 TMEM117Q9H0C3 514 aa13.47□□□□□ -0.25
SOD1-202ENST00000389995 LY9Q9HBG7 655 aa13.47□□□□□ -0.25
SOD1-202ENST00000389995 SPG21Q9NZD8 308 aa13.47□□□□□ -0.25
SOD1-202ENST00000389995 DBR1Q9UK59 544 aaKnown RBP13.47□□□□□ -0.25
SOD1-202ENST00000389995 BACH1O14867 736 aa13.46□□□□□ -0.25
SOD1-202ENST00000389995 CXCL14O95715 111 aa13.46□□□□□ -0.25
SOD1-202ENST00000389995 IGHDP01880 384 aa13.46□□□□□ -0.25
SOD1-202ENST00000389995 ATP4AP20648 1035 aa13.46□□□□□ -0.25
SOD1-202ENST00000389995 MTHFRP42898 656 aa13.46□□□□□ -0.25
SOD1-202ENST00000389995 METAP2P50579 478 aaKnown RBP eCLIP13.46□□□□□ -0.25
SOD1-202ENST00000389995 SART3Q15020 963 aaKnown RBP13.46□□□□□ -0.25
SOD1-202ENST00000389995 ANGPT1Q15389 498 aa13.46□□□□□ -0.25
SOD1-202ENST00000389995 CLLU1OSQ5K130 101 aa13.46□□□□□ -0.25
SOD1-202ENST00000389995 TMC5Q6UXY8 1006 aa13.46□□□□□ -0.25
SOD1-202ENST00000389995 CCDC60Q8IWA6 550 aaPredicted RBP13.46□□□□□ -0.25
SOD1-202ENST00000389995 SMC5Q8IY18 1101 aa13.46□□□□□ -0.25
SOD1-202ENST00000389995 ZDHHC14Q8IZN3 488 aa13.46□□□□□ -0.25
SOD1-202ENST00000389995 SLC39A11Q8N1S5 342 aa13.46□□□□□ -0.25
SOD1-202ENST00000389995 METTL13Q8N6R0 699 aa13.46□□□□□ -0.25
SOD1-202ENST00000389995 NCOA7Q8NI08 942 aa13.46□□□□□ -0.25
SOD1-202ENST00000389995 KCNG4Q8TDN1 519 aa13.46□□□□□ -0.25
SOD1-202ENST00000389995 TNPO1Q92973 898 aaKnown RBP13.46□□□□□ -0.25
SOD1-202ENST00000389995 AGO4Q9HCK5 861 aaKnown RBP13.46□□□□□ -0.25
SOD1-202ENST00000389995 NFASCO94856 1347 aa13.45□□□□□ -0.26
SOD1-202ENST00000389995 MIA3Q5JRA6 1907 aa13.45□□□□□ -0.26
SOD1-202ENST00000389995 ACACBO00763 2458 aa13.45□□□□□ -0.26
SOD1-202ENST00000389995 MAFGO15525 162 aa13.45□□□□□ -0.26
SOD1-202ENST00000389995 HBP1O60381 514 aa13.45□□□□□ -0.26
SOD1-202ENST00000389995 GPR32O75388 356 aa13.45□□□□□ -0.26
SOD1-202ENST00000389995 ATG7O95352 703 aa13.45□□□□□ -0.26
SOD1-202ENST00000389995 AOC1P19801 751 aa13.45□□□□□ -0.26
SOD1-202ENST00000389995 CRYBB1P53674 252 aaPredicted RBP13.45□□□□□ -0.26
SOD1-202ENST00000389995 KIAA1841Q6NSI8 718 aa13.45□□□□□ -0.26
SOD1-202ENST00000389995 HEATR3Q7Z4Q2 680 aa13.45□□□□□ -0.26
SOD1-202ENST00000389995 TMEM173Q86WV6 379 aaPredicted RBP13.45□□□□□ -0.26
SOD1-202ENST00000389995 MB21D2Q8IYB1 491 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms