RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 HSPA6P17066 643 aa16.61■□□□□ 0.25
ALK-201ENST00000389048 LRRC36Q1X8D7 754 aa16.61■□□□□ 0.25
ALK-201ENST00000389048 NDST4Q9H3R1 872 aa16.61■□□□□ 0.25
ALK-201ENST00000389048 C1orf228Q6PIY5 440 aa16.61■□□□□ 0.25
ALK-201ENST00000389048 C11orf74Q86VG3 221 aa16.61■□□□□ 0.25
ALK-201ENST00000389048 SSH3Q8TE77 659 aa16.61■□□□□ 0.25
ALK-201ENST00000389048 NOP53Q9NZM5 478 aaKnown RBP16.61■□□□□ 0.25
ALK-201ENST00000389048 FAM95CA0A1B0GW59 222 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 MDM2Q00987 491 aaPredicted RBP16.6■□□□□ 0.25
ALK-201ENST00000389048 NACC1Q96RE7 527 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 POLR3EQ9NVU0 708 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 ARHGAP26Q9UNA1 814 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 RNF103-CHMP3A0A140T963 221 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 PNMA6AP0CW24 399 aaPredicted RBP16.6■□□□□ 0.25
ALK-201ENST00000389048 RWDD2BP57060 319 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 SPARCL1Q14515 664 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 SCN4BQ8IWT1 228 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 NAF1Q96HR8 494 aaKnown RBP16.6■□□□□ 0.25
ALK-201ENST00000389048 CASS4Q9NQ75 786 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 KLHL11Q9NVR0 708 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 FKBP3Q00688 224 aaKnown RBP16.6■□□□□ 0.25
ALK-201ENST00000389048 NFX1Q12986 1120 aaKnown RBP16.6■□□□□ 0.25
ALK-201ENST00000389048 PDXDC2PQ6P474 469 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 NFRKBQ6P4R8 1299 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 STX18Q9P2W9 335 aaKnown RBP16.6■□□□□ 0.25
ALK-201ENST00000389048 EIF4G3O43432 1585 aaKnown RBP16.6■□□□□ 0.25
ALK-201ENST00000389048 PJA2O43164 708 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 CACNB3P54284 484 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 CYTH1Q15438 398 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 LRRC8EQ6NSJ5 796 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 DPY19L2Q6NUT2 758 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 DDIASQ8IXT1 998 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 LINC00301Q8NCQ3 95 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 SLC26A7Q8TE54 656 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 DUOX2Q9NRD8 1548 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 ADCY2Q08462 1091 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 ASPRV1Q53RT3 343 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 THAP9Q9H5L6 903 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 TMEM206Q9H813 350 aa16.6■□□□□ 0.25
ALK-201ENST00000389048 MYO1CO00159 1063 aa16.59■□□□□ 0.25
ALK-201ENST00000389048 PRPF4O43172 522 aaKnown RBP eCLIP16.59■□□□□ 0.25
ALK-201ENST00000389048 OSBPP22059 807 aa16.59■□□□□ 0.25
ALK-201ENST00000389048 SKOR1P84550 965 aa16.59■□□□□ 0.25
ALK-201ENST00000389048 NAA30Q147X3 362 aaPredicted RBP16.59■□□□□ 0.25
ALK-201ENST00000389048 CDC37Q16543 378 aaPredicted RBP16.59■□□□□ 0.25
ALK-201ENST00000389048 ALS2CLQ60I27 953 aa16.59■□□□□ 0.25
ALK-201ENST00000389048 PDIK1LQ8N165 341 aa16.59■□□□□ 0.25
ALK-201ENST00000389048 KLC2Q9H0B6 622 aa16.59■□□□□ 0.25
ALK-201ENST00000389048 A2MP01023 1474 aa16.59■□□□□ 0.25
ALK-201ENST00000389048 COPS2P61201 443 aa16.59■□□□□ 0.25
ALK-201ENST00000389048 PPM1NQ8N819 430 aa16.59■□□□□ 0.25
ALK-201ENST00000389048 DDX28Q9NUL7 540 aaKnown RBP16.59■□□□□ 0.25
ALK-201ENST00000389048 CCDC78A2IDD5 438 aa16.59■□□□□ 0.25
ALK-201ENST00000389048 ZSWIM5Q9P217 1185 aa16.59■□□□□ 0.25
ALK-201ENST00000389048 DNAJC12Q9UKB3 198 aa16.59■□□□□ 0.25
ALK-201ENST00000389048 SNX5Q9Y5X3 404 aa16.59■□□□□ 0.25
ALK-201ENST00000389048 GPATCH8Q9UKJ3 1502 aaKnown RBP16.59■□□□□ 0.25
ALK-201ENST00000389048 GOLGA8RI6L899 631 aa16.59■□□□□ 0.25
ALK-201ENST00000389048 TUBB6Q9BUF5 446 aa16.59■□□□□ 0.25
ALK-201ENST00000389048 UBA6A0AVT1 1052 aaPredicted RBP16.59■□□□□ 0.25
ALK-201ENST00000389048 HSPA8P11142 646 aaKnown RBP16.59■□□□□ 0.25
ALK-201ENST00000389048 KCNA4P22459 653 aa16.59■□□□□ 0.25
ALK-201ENST00000389048 PCYT1AP49585 367 aa16.59■□□□□ 0.25
ALK-201ENST00000389048 DCTN3O75935 186 aa16.58■□□□□ 0.25
ALK-201ENST00000389048 PRR29P0C7W0 189 aa16.58■□□□□ 0.25
ALK-201ENST00000389048 ACAD11Q709F0 780 aa16.58■□□□□ 0.25
ALK-201ENST00000389048 TGS1Q96RS0 853 aaKnown RBP16.58■□□□□ 0.25
ALK-201ENST00000389048 A0A1W2PQ27 194 aa16.58■□□□□ 0.25
ALK-201ENST00000389048 A0A1W2PQ64 194 aa16.58■□□□□ 0.25
ALK-201ENST00000389048 A0A1W2PQD8 194 aa16.58■□□□□ 0.25
ALK-201ENST00000389048 PYGLP06737 847 aa16.58■□□□□ 0.25
ALK-201ENST00000389048 HOXB7P09629 217 aa16.58■□□□□ 0.25
ALK-201ENST00000389048 CRKLP46109 303 aaKnown RBP16.58■□□□□ 0.25
ALK-201ENST00000389048 GCLMP48507 274 aa16.58■□□□□ 0.25
ALK-201ENST00000389048 ALDH18A1P54886 795 aaKnown RBP16.58■□□□□ 0.25
ALK-201ENST00000389048 ZMYM1Q5SVZ6 1142 aa16.58■□□□□ 0.25
ALK-201ENST00000389048 AFG1LQ8WV93 481 aa16.58■□□□□ 0.25
ALK-201ENST00000389048 SAAL1Q96ER3 474 aa16.58■□□□□ 0.25
ALK-201ENST00000389048 BHMT2Q9H2M3 363 aa16.58■□□□□ 0.25
ALK-201ENST00000389048 ASAP1Q9ULH1 1129 aa16.58■□□□□ 0.25
ALK-201ENST00000389048 AURKCQ9UQB9 309 aa16.58■□□□□ 0.25
ALK-201ENST00000389048 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.58■□□□□ 0.25
ALK-201ENST00000389048 TMEM247A6NEH6 219 aa16.58■□□□□ 0.24
ALK-201ENST00000389048 HMGB1P1B2RPK0 211 aaPredicted RBP16.58■□□□□ 0.24
ALK-201ENST00000389048 TJP3O95049 919 aa16.58■□□□□ 0.24
ALK-201ENST00000389048 MOCS2O96007 188 aaPredicted RBP16.58■□□□□ 0.24
ALK-201ENST00000389048 PHKG2P15735 406 aa16.58■□□□□ 0.24
ALK-201ENST00000389048 ARL13BQ3SXY8 428 aa16.58■□□□□ 0.24
ALK-201ENST00000389048 ALKBH5Q6P6C2 394 aaKnown RBP16.58■□□□□ 0.24
ALK-201ENST00000389048 MAP4K1Q92918 833 aa16.58■□□□□ 0.24
ALK-201ENST00000389048 ZNF229Q9UJW7 825 aa16.58■□□□□ 0.24
ALK-201ENST00000389048 BMP3P12645 472 aa16.58■□□□□ 0.24
ALK-201ENST00000389048 ACCSLQ4AC99 568 aa16.58■□□□□ 0.24
ALK-201ENST00000389048 ANKMY2Q8IV38 441 aa16.58■□□□□ 0.24
ALK-201ENST00000389048 EGFL8Q99944 293 aa16.58■□□□□ 0.24
ALK-201ENST00000389048 POTEMA6NI47 508 aa16.57■□□□□ 0.24
ALK-201ENST00000389048 SH2B2O14492 632 aaPredicted RBP16.57■□□□□ 0.24
ALK-201ENST00000389048 EFTUD2Q15029 972 aaKnown RBP eCLIP16.57■□□□□ 0.24
ALK-201ENST00000389048 BTBD6Q96KE9 485 aa16.57■□□□□ 0.24
ALK-201ENST00000389048 TMEM60Q9H2L4 133 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms