RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 ZSWIM5Q9P217 1185 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 PPLO60437 1756 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 MFAP3LO75121 409 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 PRELPP51888 382 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 NDST4Q9H3R1 872 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 SPTLC3Q9NUV7 552 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 DENND3A2RUS2 1198 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 BHMT2Q9H2M3 363 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 OLA1Q9NTK5 396 aaKnown RBP13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 MYO5BQ9ULV0 1848 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 ECE2O60344 883 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 YWHAHQ04917 246 aaPredicted RBP13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 FBXO41Q8TF61 875 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 STRIP2Q9ULQ0 834 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 SPTBP11277 2137 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 LGALS16A8MUM7 142 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 EPHB1P54762 984 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 PRPF38AQ8NAV1 312 aaKnown RBP13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 NDUFA10O95299 355 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 FAM182BQ5T319 152 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 CPDO75976 1380 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 STK36Q9NRP7 1315 aa13.2□□□□□ -0.3
KCNQ3-201ENST00000388996 PAMP19021 973 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 CDC25AP30304 524 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 ENOX1Q8TC92 643 aaKnown RBP13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 VPS39Q96JC1 886 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 KLC2Q9H0B6 622 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 FBXO40Q9UH90 709 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 TBK1Q9UHD2 729 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 RIMS1Q86UR5 1692 aaKnown RBP13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 TJP3O95049 919 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 NR1H3Q13133 447 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 ELMOD1Q8N336 334 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 GDAQ9Y2T3 454 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 GNGT2O14610 69 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 IL1RL1Q01638 556 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 NUP85Q9BW27 656 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 ARL4CP56559 192 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 PADI6Q6TGC4 694 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 CD2BP2O95400 341 aaKnown RBP13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 TAC1P20366 129 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 CDR2Q01850 454 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 RHOT2Q8IXI1 618 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 NDUFAF2Q8N183 169 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 RWDD2BP57060 319 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 TWF2Q6IBS0 349 aaKnown RBP13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 BANK1Q8NDB2 785 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 ZBTB18Q99592 522 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 FSD1LQ9BXM9 530 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 CDO1Q16878 200 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 UNC13DQ70J99 1090 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 FOXP4Q8IVH2 680 aaPredicted RBP13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 TOPORSQ9NS56 1045 aaPredicted RBP13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 IQANK1A0A1B0GTG1 560 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 POTEMA6NI47 508 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 SNAP25P60880 206 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 PYROXD1Q8WU10 500 aa13.19□□□□□ -0.3
KCNQ3-201ENST00000388996 GNAT1P11488 350 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 RESTQ13127 1097 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 ANGPTL8Q6UXH0 198 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 TSPY1Q01534 308 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 ERICH1Q86X53 443 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 CYP2D6P10635 497 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 RECQLP46063 649 aaPredicted RBP13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 URGCPQ8TCY9 931 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 EXT2Q93063 718 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 STRBPQ96SI9 672 aaKnown RBP13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 SPECC1L-ADORA2AF8WAN1 911 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 SEC31AO94979 1220 aaKnown RBP13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 CRKP46108 304 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 ADCY1Q08828 1119 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 PDCD2Q16342 344 aaPredicted RBP13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 FRA10AC1Q70Z53 315 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 DGKHQ86XP1 1220 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 FRMPD1Q5SYB0 1578 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 CYP27A1Q02318 531 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 NNTQ13423 1086 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 TTLL11Q8NHH1 800 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 PIGOQ8TEQ8 1089 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 POLR3FQ9H1D9 316 aaPredicted RBP13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 RCAN1P53805 252 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 PPP6R3Q5H9R7 873 aaPredicted RBP13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 APOBEC3FQ8IUX4 373 aaKnown RBP13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 SAMSN1Q9NSI8 373 aaKnown RBP13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 ATXN8OSP0DMR3 200 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 MXD3Q9BW11 206 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 AP1M1Q9BXS5 423 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 HPCAL4Q9UM19 191 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 ZHX2Q9Y6X8 837 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 UTYO14607 1347 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 ADRA2BP18089 450 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 EIF3BP55884 814 aaKnown RBP13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 ATG16L1Q676U5 607 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 FIS1Q9Y3D6 152 aa13.18□□□□□ -0.3
KCNQ3-201ENST00000388996 HSP90AA5PQ58FG0 334 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 CALR3Q96L12 384 aaKnown RBP13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 NGRNQ9NPE2 291 aaKnown RBP13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 FAF1Q9UNN5 650 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms