RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 ARP10275 920 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 BCRP11274 1271 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 FERP16591 822 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 ACTN2P35609 894 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 HSD17B4P51659 736 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 NNTQ13423 1086 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 ALKBH5Q6P6C2 394 aaKnown RBP16.34■□□□□ 0.21
SCFD2-201ENST00000388940 VPS36Q86VN1 386 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 MS4A14Q96JA4 679 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 STRA6Q9BX79 667 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 POLD4Q9HCU8 107 aa16.34■□□□□ 0.21
SCFD2-201ENST00000388940 A0A0A6YYK5 440 aaPredicted RBP16.33■□□□□ 0.2
SCFD2-201ENST00000388940 RPS6KA5O75582 802 aa16.33■□□□□ 0.2
SCFD2-201ENST00000388940 PTGER2P43116 358 aa16.33■□□□□ 0.2
SCFD2-201ENST00000388940 MYBPC2Q14324 1141 aa16.33■□□□□ 0.2
SCFD2-201ENST00000388940 ENOX2Q16206 610 aaKnown RBP16.33■□□□□ 0.2
SCFD2-201ENST00000388940 SLC9A9Q8IVB4 645 aa16.33■□□□□ 0.2
SCFD2-201ENST00000388940 MXRA8Q9BRK3 442 aa16.33■□□□□ 0.2
SCFD2-201ENST00000388940 VPS33BQ9H267 617 aa16.33■□□□□ 0.2
SCFD2-201ENST00000388940 GDF3Q9NR23 364 aa16.33■□□□□ 0.2
SCFD2-201ENST00000388940 ZBTB39O15060 712 aa16.33■□□□□ 0.2
SCFD2-201ENST00000388940 GGCXP38435 758 aa16.33■□□□□ 0.2
SCFD2-201ENST00000388940 STAT1P42224 750 aa16.33■□□□□ 0.2
SCFD2-201ENST00000388940 SLC7A5Q01650 507 aa16.33■□□□□ 0.2
SCFD2-201ENST00000388940 PPP2R5AQ15172 486 aa16.33■□□□□ 0.2
SCFD2-201ENST00000388940 ZC2HC1CQ53FD0 456 aaPredicted RBP16.33■□□□□ 0.2
SCFD2-201ENST00000388940 SLC30A10Q6XR72 485 aa16.33■□□□□ 0.2
SCFD2-201ENST00000388940 SND1Q7KZF4 910 aaKnown RBP eCLIP16.33■□□□□ 0.2
SCFD2-201ENST00000388940 HS2ST1Q7LGA3 356 aa16.33■□□□□ 0.2
SCFD2-201ENST00000388940 NIPA1Q7RTP0 329 aa16.33■□□□□ 0.2
SCFD2-201ENST00000388940 FAM178BQ8IXR5 827 aa16.33■□□□□ 0.2
SCFD2-201ENST00000388940 IFT20Q8IY31 132 aa16.33■□□□□ 0.2
SCFD2-201ENST00000388940 LRRC57Q8N9N7 239 aa16.33■□□□□ 0.2
SCFD2-201ENST00000388940 PBKQ96KB5 322 aa16.33■□□□□ 0.2
SCFD2-201ENST00000388940 FAM204AQ9H8W3 233 aa16.33■□□□□ 0.2
SCFD2-201ENST00000388940 WRAP73Q9P2S5 460 aaPredicted RBP16.33■□□□□ 0.2
SCFD2-201ENST00000388940 PGAP2Q9UHJ9 254 aa16.33■□□□□ 0.2
SCFD2-201ENST00000388940 AJAP1Q9UKB5 411 aaPredicted RBP16.33■□□□□ 0.2
SCFD2-201ENST00000388940 RPTORQ8N122 1335 aa16.32■□□□□ 0.2
SCFD2-201ENST00000388940 PHACTR2O75167 634 aa16.32■□□□□ 0.2
SCFD2-201ENST00000388940 RAD17O75943 681 aa16.32■□□□□ 0.2
SCFD2-201ENST00000388940 FMO5P49326 533 aa16.32■□□□□ 0.2
SCFD2-201ENST00000388940 NPEPPSP55786 919 aa16.32■□□□□ 0.2
SCFD2-201ENST00000388940 UBXN2AP68543 259 aa16.32■□□□□ 0.2
SCFD2-201ENST00000388940 GHRHRQ02643 423 aa16.32■□□□□ 0.2
SCFD2-201ENST00000388940 ZSCAN26Q16670 478 aa16.32■□□□□ 0.2
SCFD2-201ENST00000388940 FMNL3Q8IVF7 1028 aa16.32■□□□□ 0.2
SCFD2-201ENST00000388940 TMEM174Q8WUU8 243 aa16.32■□□□□ 0.2
SCFD2-201ENST00000388940 GDAP1L1Q96MZ0 367 aa16.32■□□□□ 0.2
SCFD2-201ENST00000388940 STK33Q9BYT3 514 aa16.32■□□□□ 0.2
SCFD2-201ENST00000388940 AGPAT3Q9NRZ7 376 aa16.32■□□□□ 0.2
SCFD2-201ENST00000388940 TMEM59LQ9UK28 342 aa16.32■□□□□ 0.2
SCFD2-201ENST00000388940 GOLGA6BA6NDN3 693 aa16.31■□□□□ 0.2
SCFD2-201ENST00000388940 IPO5O00410 1097 aaKnown RBP16.31■□□□□ 0.2
SCFD2-201ENST00000388940 PPP1R37O75864 691 aa16.31■□□□□ 0.2
SCFD2-201ENST00000388940 KIF4AO95239 1232 aa16.31■□□□□ 0.2
SCFD2-201ENST00000388940 ICAM1P05362 532 aa16.31■□□□□ 0.2
SCFD2-201ENST00000388940 RPS6KA1Q15418 735 aa16.31■□□□□ 0.2
SCFD2-201ENST00000388940 ALS2CLQ60I27 953 aa16.31■□□□□ 0.2
SCFD2-201ENST00000388940 GOLGA6L1Q8N7Z2 621 aa16.31■□□□□ 0.2
SCFD2-201ENST00000388940 TTLL6Q8N841 843 aa16.31■□□□□ 0.2
SCFD2-201ENST00000388940 AGBL3Q8NEM8 1001 aa16.31■□□□□ 0.2
SCFD2-201ENST00000388940 AFAP1L1Q8TED9 768 aa16.31■□□□□ 0.2
SCFD2-201ENST00000388940 TAF4BQ92750 862 aa16.31■□□□□ 0.2
SCFD2-201ENST00000388940 FRMD4BQ9Y2L6 1034 aa16.31■□□□□ 0.2
SCFD2-201ENST00000388940 H2AFZP0C0S5 128 aa16.31■□□□□ 0.2
SCFD2-201ENST00000388940 MAPTP10636 758 aaKnown RBP16.31■□□□□ 0.2
SCFD2-201ENST00000388940 ODR4Q5SWX8 454 aa16.31■□□□□ 0.2
SCFD2-201ENST00000388940 H2AFVQ71UI9 128 aa16.31■□□□□ 0.2
SCFD2-201ENST00000388940 SLFN11Q7Z7L1 901 aa16.31■□□□□ 0.2
SCFD2-201ENST00000388940 LARGE2Q8N3Y3 721 aa16.31■□□□□ 0.2
SCFD2-201ENST00000388940 USP38Q8NB14 1042 aa16.31■□□□□ 0.2
SCFD2-201ENST00000388940 SLC30A5Q8TAD4 765 aa16.31■□□□□ 0.2
SCFD2-201ENST00000388940 LMBR1Q8WVP7 490 aa16.31■□□□□ 0.2
SCFD2-201ENST00000388940 LXNQ9BS40 222 aa16.31■□□□□ 0.2
SCFD2-201ENST00000388940 DDX3XO00571 662 aaKnown RBP eCLIP16.3■□□□□ 0.24e-7■■■□□ 17.9
SCFD2-201ENST00000388940 ASNSP08243 561 aa16.3■□□□□ 0.2
SCFD2-201ENST00000388940 CAPN2P17655 700 aa16.3■□□□□ 0.2
SCFD2-201ENST00000388940 SOX5P35711 763 aa16.3■□□□□ 0.2
SCFD2-201ENST00000388940 MAPK7Q13164 816 aa16.3■□□□□ 0.2
SCFD2-201ENST00000388940 LEKR1Q6ZMV7 388 aa16.3■□□□□ 0.2
SCFD2-201ENST00000388940 TPCN2Q8NHX9 752 aa16.3■□□□□ 0.2
SCFD2-201ENST00000388940 ACTRT1Q8TDG2 376 aa16.3■□□□□ 0.2
SCFD2-201ENST00000388940 ZBED3Q96IU2 234 aaPredicted RBP16.3■□□□□ 0.2
SCFD2-201ENST00000388940 SH3GL2Q99962 352 aa16.3■□□□□ 0.2
SCFD2-201ENST00000388940 TMEM39BQ9GZU3 492 aa16.3■□□□□ 0.2
SCFD2-201ENST00000388940 VEZTQ9HBM0 779 aa16.3■□□□□ 0.2
SCFD2-201ENST00000388940 FBXO28Q9NVF7 368 aa16.3■□□□□ 0.2
SCFD2-201ENST00000388940 COL4A5P29400 1685 aa16.3■□□□□ 0.2
SCFD2-201ENST00000388940 ARHGEF35A5YM69 484 aa16.3■□□□□ 0.2
SCFD2-201ENST00000388940 ZBTB48P10074 688 aaPredicted RBP16.3■□□□□ 0.2
SCFD2-201ENST00000388940 ITGB5P18084 799 aa16.3■□□□□ 0.2
SCFD2-201ENST00000388940 COG2Q14746 738 aa16.3■□□□□ 0.2
SCFD2-201ENST00000388940 GJB7Q6PEY0 223 aa16.3■□□□□ 0.2
SCFD2-201ENST00000388940 PLCD3Q8N3E9 789 aa16.3■□□□□ 0.2
SCFD2-201ENST00000388940 OLIG1Q8TAK6 271 aa16.3■□□□□ 0.2
SCFD2-201ENST00000388940 IKZF4Q9H2S9 585 aa16.3■□□□□ 0.2
SCFD2-201ENST00000388940 STK32BQ9NY57 414 aa16.3■□□□□ 0.2
SCFD2-201ENST00000388940 PACSIN2Q9UNF0 486 aaPredicted RBP16.3■□□□□ 0.2
SCFD2-201ENST00000388940 ZNF536O15090 1300 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms