RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 ECE1P42892 770 aa7.05□□□□□ -1.28
RNU6-40P-201ENST00000384254 RGS3P49796 1198 aa7.05□□□□□ -1.28
RNU6-40P-201ENST00000384254 SPIDRQ14159 915 aa7.05□□□□□ -1.28
RNU6-40P-201ENST00000384254 MYBPC3Q14896 1274 aa7.05□□□□□ -1.28
RNU6-40P-201ENST00000384254 MINDY4Q4G0A6 757 aa7.05□□□□□ -1.28
RNU6-40P-201ENST00000384254 DPP8Q6V1X1 898 aaPredicted RBP7.05□□□□□ -1.28
RNU6-40P-201ENST00000384254 C14orf80Q86SX3 495 aa7.05□□□□□ -1.28
RNU6-40P-201ENST00000384254 NBPF11Q86T75 865 aa7.05□□□□□ -1.28
RNU6-40P-201ENST00000384254 CMTR2Q8IYT2 770 aaKnown RBP7.05□□□□□ -1.28
RNU6-40P-201ENST00000384254 MIER2Q8N344 545 aa7.05□□□□□ -1.28
RNU6-40P-201ENST00000384254 FAM168AQ92567 244 aa7.05□□□□□ -1.28
RNU6-40P-201ENST00000384254 WRNIP1Q96S55 665 aa7.05□□□□□ -1.28
RNU6-40P-201ENST00000384254 EPB41L4BQ9H329 900 aa7.05□□□□□ -1.28
RNU6-40P-201ENST00000384254 ARHGAP20Q9P2F6 1191 aa7.05□□□□□ -1.28
RNU6-40P-201ENST00000384254 GABBR1Q9UBS5 961 aa7.05□□□□□ -1.28
RNU6-40P-201ENST00000384254 ZBTB21Q9ULJ3 1066 aa7.05□□□□□ -1.28
RNU6-40P-201ENST00000384254 NUMBLQ9Y6R0 609 aa7.05□□□□□ -1.28
RNU6-40P-201ENST00000384254 ELL2O00472 640 aaPredicted RBP7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 NFIBO00712 420 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 PCDHGA12O60330 932 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 CAND2O75155 1236 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 PCDH8O95206 1070 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 KRT18P05783 430 aaKnown RBP7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 LPLP06858 475 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 OSMP13725 252 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 AGXTP21549 392 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 XPAP23025 273 aaPredicted RBP7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 MAP3K12Q12852 859 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 NFATC3Q12968 1075 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 TCIRG1Q13488 830 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 MOGSQ13724 837 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 HLTFQ14527 1009 aaKnown RBP eCLIP7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 SKIDA1Q1XH10 827 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 PITRM1Q5JRX3 1037 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 ZBTB41Q5SVQ8 909 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 CCSAPQ6IQ19 270 aaPredicted RBP7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 LIPIQ6XZB0 460 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 FAM26EQ8N5C1 309 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 TTC8Q8TAM2 541 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 CLIP3Q96DZ5 547 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 CLIC6Q96NY7 704 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 BTBD2Q9BX70 525 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 OR10A5Q9H207 317 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 KCTD10Q9H3F6 313 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 DCP1AQ9NPI6 582 aaPredicted RBP7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 SYNPO2Q9UMS6 1093 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 PCDHGA9Q9Y5G4 932 aaKnown RBP7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 PCDHGA8Q9Y5G5 932 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 PCDHGA7Q9Y5G6 932 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 PCDHGA6Q9Y5G7 932 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 PCDHGA3Q9Y5H0 932 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 PCDHGA2Q9Y5H1 932 aa7.04□□□□□ -1.28
RNU6-40P-201ENST00000384254 CCDC194A0A1B0GVG4 234 aa7.03□□□□□ -1.28
RNU6-40P-201ENST00000384254 PLIN1O60240 522 aa7.03□□□□□ -1.28
RNU6-40P-201ENST00000384254 C8BP07358 591 aa7.03□□□□□ -1.28
RNU6-40P-201ENST00000384254 JUNBP17275 347 aaPredicted RBP7.03□□□□□ -1.28
RNU6-40P-201ENST00000384254 SLC16A1P53985 500 aa7.03□□□□□ -1.28
RNU6-40P-201ENST00000384254 LGALS4P56470 323 aa7.03□□□□□ -1.28
RNU6-40P-201ENST00000384254 GTF2H3Q13889 308 aa7.03□□□□□ -1.28
RNU6-40P-201ENST00000384254 ODF1Q14990 250 aa7.03□□□□□ -1.28
RNU6-40P-201ENST00000384254 KANSL1Q7Z3B3 1105 aa7.03□□□□□ -1.28
RNU6-40P-201ENST00000384254 TPH2Q8IWU9 490 aa7.03□□□□□ -1.28
RNU6-40P-201ENST00000384254 OR14C36Q8NHC7 312 aa7.03□□□□□ -1.28
RNU6-40P-201ENST00000384254 JADE3Q92613 823 aa7.03□□□□□ -1.28
RNU6-40P-201ENST00000384254 MTG2Q9H4K7 406 aa7.03□□□□□ -1.28
RNU6-40P-201ENST00000384254 NSUN3Q9H649 340 aaKnown RBP7.03□□□□□ -1.28
RNU6-40P-201ENST00000384254 FAM53CQ9NYF3 392 aa7.03□□□□□ -1.28
RNU6-40P-201ENST00000384254 RBPJLQ9UBG7 517 aa7.03□□□□□ -1.28
RNU6-40P-201ENST00000384254 DPP7Q9UHL4 492 aa7.03□□□□□ -1.28
RNU6-40P-201ENST00000384254 RCAN3Q9UKA8 241 aa7.03□□□□□ -1.28
RNU6-40P-201ENST00000384254 MYPNQ86TC9 1320 aa7.02□□□□□ -1.28
RNU6-40P-201ENST00000384254 PEX10O60683 326 aa7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 MPIG6BO95866 241 aa7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 HSPA6P17066 643 aa7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 GLRBP48167 497 aa7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 MTNR1BP49286 362 aa7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 PPARAQ07869 468 aa7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 NOLC1Q14978 699 aaKnown RBP eCLIP7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 MBNL2Q5VZF2 373 aaKnown RBP7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 LRSAM1Q6UWE0 723 aa7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 PROSER1Q86XN7 944 aa7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 CDYL2Q8N8U2 506 aa7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 DTX3Q8N9I9 347 aa7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 SMARCC2Q8TAQ2 1214 aa7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 LIN37Q96GY3 246 aaPredicted RBP7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 HIST1H2AHQ96KK5 128 aa7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 LRGUKQ96M69 825 aa7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 DIRC2Q96SL1 478 aa7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 HIST1H2AJQ99878 128 aa7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 AMNQ9BXJ7 453 aa7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 ACE2Q9BYF1 805 aaPredicted RBP7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 NMRK2Q9NPI5 230 aa7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 ZNF277Q9NRM2 450 aaPredicted RBP7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 FTSJ1Q9UET6 329 aa7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 USP18Q9UMW8 372 aa7.02□□□□□ -1.29
RNU6-40P-201ENST00000384254 NRP2O60462 931 aa7.01□□□□□ -1.29
RNU6-40P-201ENST00000384254 NDUFS2O75306 463 aa7.01□□□□□ -1.29
RNU6-40P-201ENST00000384254 CYP7B1O75881 506 aa7.01□□□□□ -1.29
RNU6-40P-201ENST00000384254 PFKMP08237 780 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms