RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 ZRSR1Q15695 479 aaKnown RBP21.65■■□□□ 1.06
GTF3A-201ENST00000381140 NME8Q8N427 588 aa21.65■■□□□ 1.06
GTF3A-201ENST00000381140 IGSF22Q8N9C0 903 aa21.65■■□□□ 1.06
GTF3A-201ENST00000381140 ZNF668Q96K58 619 aaPredicted RBP21.65■■□□□ 1.06
GTF3A-201ENST00000381140 RANBP2P49792 3224 aaKnown RBP21.64■■□□□ 1.06
GTF3A-201ENST00000381140 F13A1P00488 732 aa21.64■■□□□ 1.06
GTF3A-201ENST00000381140 CXCL10P02778 98 aa21.64■■□□□ 1.06
GTF3A-201ENST00000381140 RPA1P27694 616 aa21.64■■□□□ 1.06
GTF3A-201ENST00000381140 TCTN1Q2MV58 587 aa21.64■■□□□ 1.06
GTF3A-201ENST00000381140 KRT79Q5XKE5 535 aa21.64■■□□□ 1.06
GTF3A-201ENST00000381140 ARL6IP4Q66PJ3 421 aaKnown RBP21.64■■□□□ 1.06
GTF3A-201ENST00000381140 HERVK_113Q902F9 699 aa21.64■■□□□ 1.06
GTF3A-201ENST00000381140 SCLT1Q96NL6 688 aa21.64■■□□□ 1.06
GTF3A-201ENST00000381140 USP28Q96RU2 1077 aa21.64■■□□□ 1.06
GTF3A-201ENST00000381140 CEP89Q96ST8 783 aa21.64■■□□□ 1.06
GTF3A-201ENST00000381140 CELF4Q9BZC1 486 aaKnown RBP21.64■■□□□ 1.06
GTF3A-201ENST00000381140 MTIF3Q9H2K0 278 aaKnown RBP21.64■■□□□ 1.06
GTF3A-201ENST00000381140 CXXC1Q9P0U4 656 aaPredicted RBP21.64■■□□□ 1.06
GTF3A-201ENST00000381140 PTPRSQ13332 1948 aa21.64■■□□□ 1.05
GTF3A-201ENST00000381140 LYPLA2O95372 231 aa21.63■■□□□ 1.05
GTF3A-201ENST00000381140 PDIA4P13667 645 aaKnown RBP21.63■■□□□ 1.05
GTF3A-201ENST00000381140 MARCKSP29966 332 aaPredicted RBP21.63■■□□□ 1.05
GTF3A-201ENST00000381140 DRP2Q13474 957 aa21.63■■□□□ 1.05
GTF3A-201ENST00000381140 KIZQ2M2Z5 673 aa21.63■■□□□ 1.05
GTF3A-201ENST00000381140 CNKSR3Q6P9H4 555 aa21.63■■□□□ 1.05
GTF3A-201ENST00000381140 DBF4BQ8NFT6 615 aa21.63■■□□□ 1.05
GTF3A-201ENST00000381140 SLC7A3Q8WY07 619 aa21.63■■□□□ 1.05
GTF3A-201ENST00000381140 ANKEF1Q9NU02 776 aa21.63■■□□□ 1.05
GTF3A-201ENST00000381140 TFIP11Q9UBB9 837 aaKnown RBP21.63■■□□□ 1.05
GTF3A-201ENST00000381140 MAFO75444 373 aaPredicted RBP21.62■■□□□ 1.05
GTF3A-201ENST00000381140 RFC5P40937 340 aa21.62■■□□□ 1.05
GTF3A-201ENST00000381140 DNM2P50570 870 aa21.62■■□□□ 1.05
GTF3A-201ENST00000381140 LPIN1Q14693 890 aa21.62■■□□□ 1.05
GTF3A-201ENST00000381140 ECM1Q16610 540 aa21.62■■□□□ 1.05
GTF3A-201ENST00000381140 FBXO47Q5MNV8 452 aa21.62■■□□□ 1.05
GTF3A-201ENST00000381140 LINC01465Q8N7H1 131 aa21.62■■□□□ 1.05
GTF3A-201ENST00000381140 SEPT8Q92599 483 aa21.62■■□□□ 1.05
GTF3A-201ENST00000381140 ZNF396Q96N95 335 aaPredicted RBP21.62■■□□□ 1.05
GTF3A-201ENST00000381140 NACC1Q96RE7 527 aa21.62■■□□□ 1.05
GTF3A-201ENST00000381140 JPH2Q9BR39 696 aaPredicted RBP21.62■■□□□ 1.05
GTF3A-201ENST00000381140 CDHR5Q9HBB8 845 aa21.62■■□□□ 1.05
GTF3A-201ENST00000381140 DDX19AQ9NUU7 478 aaKnown RBP21.62■■□□□ 1.05
GTF3A-201ENST00000381140 KIAA1024Q9UPX6 916 aa21.62■■□□□ 1.05
GTF3A-201ENST00000381140 STK24Q9Y6E0 443 aa21.62■■□□□ 1.05
GTF3A-201ENST00000381140 TCHHQ07283 1943 aa21.62■■□□□ 1.05
GTF3A-201ENST00000381140 NLRP11P59045 1033 aaKnown RBP21.61■■□□□ 1.05
GTF3A-201ENST00000381140 GRIN1Q05586 938 aa21.61■■□□□ 1.05
GTF3A-201ENST00000381140 MKRN4PQ13434 485 aaPredicted RBP21.61■■□□□ 1.05
GTF3A-201ENST00000381140 EMC2Q15006 297 aa21.61■■□□□ 1.05
GTF3A-201ENST00000381140 PTPAQ15257 358 aa21.61■■□□□ 1.05
GTF3A-201ENST00000381140 PLEKHG4Q58EX7 1191 aa21.61■■□□□ 1.05
GTF3A-201ENST00000381140 TMEM143Q96AN5 459 aa21.61■■□□□ 1.05
GTF3A-201ENST00000381140 PLIN2Q99541 437 aa21.61■■□□□ 1.05
GTF3A-201ENST00000381140 OSMRQ99650 979 aa21.61■■□□□ 1.05
GTF3A-201ENST00000381140 IFIH1Q9BYX4 1025 aaKnown RBP21.61■■□□□ 1.05
GTF3A-201ENST00000381140 SUCLA2Q9P2R7 463 aaPredicted RBP21.61■■□□□ 1.05
GTF3A-201ENST00000381140 SLC4A7Q9Y6M7 1214 aa21.61■■□□□ 1.05
GTF3A-201ENST00000381140 USO1O60763 962 aaKnown RBP21.61■■□□□ 1.05
GTF3A-201ENST00000381140 RARRES1P49788 294 aa21.61■■□□□ 1.05
GTF3A-201ENST00000381140 IKBKEQ14164 716 aa21.61■■□□□ 1.05
GTF3A-201ENST00000381140 STK38Q15208 465 aa21.61■■□□□ 1.05
GTF3A-201ENST00000381140 TSHZ1Q6ZSZ6 1077 aa21.61■■□□□ 1.05
GTF3A-201ENST00000381140 MMTAG2Q9BU76 263 aaKnown RBP21.61■■□□□ 1.05
GTF3A-201ENST00000381140 PPME1Q9Y570 386 aa21.61■■□□□ 1.05
GTF3A-201ENST00000381140 IGKV6-21A0A0C4DH24 114 aa21.6■■□□□ 1.05
GTF3A-201ENST00000381140 ARHGEF35A5YM69 484 aa21.6■■□□□ 1.05
GTF3A-201ENST00000381140 SOX1O00570 391 aaPredicted RBP21.6■■□□□ 1.05
GTF3A-201ENST00000381140 CD52P31358 61 aa21.6■■□□□ 1.05
GTF3A-201ENST00000381140 KCNJ6P48051 423 aa21.6■■□□□ 1.05
GTF3A-201ENST00000381140 RHPN2Q8IUC4 686 aa21.6■■□□□ 1.05
GTF3A-201ENST00000381140 EXOC8Q8IYI6 725 aa21.6■■□□□ 1.05
GTF3A-201ENST00000381140 NLRP7Q8WX94 980 aa21.6■■□□□ 1.05
GTF3A-201ENST00000381140 CDK5RAP3Q96JB5 506 aa21.6■■□□□ 1.05
GTF3A-201ENST00000381140 MTRQ99707 1265 aa21.6■■□□□ 1.05
GTF3A-201ENST00000381140 DHX33Q9H6R0 707 aaKnown RBP21.6■■□□□ 1.05
GTF3A-201ENST00000381140 AGO3Q9H9G7 860 aaKnown RBP21.6■■□□□ 1.05
GTF3A-201ENST00000381140 KDM3AQ9Y4C1 1321 aa21.59■■□□□ 1.05
GTF3A-201ENST00000381140 GRXCR1A8MXD5 290 aa21.59■■□□□ 1.05
GTF3A-201ENST00000381140 BRD1O95696 1058 aa21.59■■□□□ 1.05
GTF3A-201ENST00000381140 XRCC6P12956 609 aaKnown RBP eCLIP21.59■■□□□ 1.05
GTF3A-201ENST00000381140 CRYBB1P53674 252 aaPredicted RBP21.59■■□□□ 1.05
GTF3A-201ENST00000381140 PAK2Q13177 524 aa21.59■■□□□ 1.05
GTF3A-201ENST00000381140 RASIP1Q5U651 963 aa21.59■■□□□ 1.05
GTF3A-201ENST00000381140 FAM109BQ6ICB4 259 aaPredicted RBP21.59■■□□□ 1.05
GTF3A-201ENST00000381140 MAEAQ7L5Y9 396 aa21.59■■□□□ 1.05
GTF3A-201ENST00000381140 CABP7Q86V35 215 aa21.59■■□□□ 1.05
GTF3A-201ENST00000381140 KSR1Q8IVT5 923 aa21.59■■□□□ 1.05
GTF3A-201ENST00000381140 RASSF8Q8NHQ8 419 aa21.59■■□□□ 1.05
GTF3A-201ENST00000381140 ATP6V0A4Q9HBG4 840 aa21.59■■□□□ 1.05
GTF3A-201ENST00000381140 DBR1Q9UK59 544 aaKnown RBP21.59■■□□□ 1.05
GTF3A-201ENST00000381140 MYH11P35749 1972 aa21.59■■□□□ 1.05
GTF3A-201ENST00000381140 ABHD14A-ACY1A0A1B0GW23 586 aa21.58■■□□□ 1.04
GTF3A-201ENST00000381140 GPR32O75388 356 aa21.58■■□□□ 1.04
GTF3A-201ENST00000381140 BAIAP3O94812 1187 aa21.58■■□□□ 1.04
GTF3A-201ENST00000381140 MUTP22033 750 aa21.58■■□□□ 1.04
GTF3A-201ENST00000381140 LONP1P36776 959 aaKnown RBP21.58■■□□□ 1.04
GTF3A-201ENST00000381140 UBA7P41226 1012 aa21.58■■□□□ 1.04
GTF3A-201ENST00000381140 GPC3P51654 580 aa21.58■■□□□ 1.04
GTF3A-201ENST00000381140 NFX1Q12986 1120 aaKnown RBP21.58■■□□□ 1.04
GTF3A-201ENST00000381140 LRIT3Q3SXY7 679 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms