RNA–Protein interactions for RNA: ENST00000380875.7

FREM1-201, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 1 (best)

Gene FREM1, Length 6,126 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-201ENST00000380875 SNX17Q15036 470 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 ADCK2Q7Z695 626 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 TBC1D19Q8N5T2 526 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 POLR3EQ9NVU0 708 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 PCDHB8Q9UN66 801 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 SPECC1L-ADORA2AF8WAN1 911 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 SART1O43290 800 aaKnown RBP9.9□□□□□ -0.82
FREM1-201ENST00000380875 GH1P01241 217 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 SCRN1Q12765 414 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 PAN2Q504Q3 1202 aaKnown RBP9.9□□□□□ -0.82
FREM1-201ENST00000380875 KCNV1Q6PIU1 500 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 TOGARAM2Q6ZUX3 1019 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 GPRC5AQ8NFJ5 357 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 LRRC8CQ8TDW0 803 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 SSH3Q8TE77 659 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 FAF2Q96CS3 445 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 CCDC51Q96ER9 411 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 NR1H4Q96RI1 486 aaPredicted RBP9.9□□□□□ -0.82
FREM1-201ENST00000380875 BRIP1Q9BX63 1249 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 BHMT2Q9H2M3 363 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 IGSF1Q8N6C5 1336 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 GCC2Q8IWJ2 1684 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 GADD45BO75293 160 aaPredicted RBP9.9□□□□□ -0.82
FREM1-201ENST00000380875 NFIXQ14938 502 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 KIF19Q2TAC6 998 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 B4GALNT4Q76KP1 1039 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 LMNTD2Q8IXW0 634 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 C10orf67Q8IYJ2 551 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 FOXP1Q9H334 677 aaPredicted RBP9.9□□□□□ -0.82
FREM1-201ENST00000380875 KRT82Q9NSB4 513 aa9.9□□□□□ -0.82
FREM1-201ENST00000380875 G3BP2Q9UN86 482 aaKnown RBP9.9□□□□□ -0.82
FREM1-201ENST00000380875 TAC1P20366 129 aa9.9□□□□□ -0.83
FREM1-201ENST00000380875 ARHGDIAP52565 204 aa9.9□□□□□ -0.83
FREM1-201ENST00000380875 GTF2A2P52657 109 aa9.9□□□□□ -0.83
FREM1-201ENST00000380875 EHHADHQ08426 723 aa9.9□□□□□ -0.83
FREM1-201ENST00000380875 CELF1Q92879 486 aaKnown RBP9.9□□□□□ -0.83
FREM1-201ENST00000380875 P2RX5Q93086 422 aa9.9□□□□□ -0.83
FREM1-201ENST00000380875 ZBTB18Q99592 522 aa9.9□□□□□ -0.83
FREM1-201ENST00000380875 MUC3BQ9H195 1237 aa9.9□□□□□ -0.83
FREM1-201ENST00000380875 ZBTB12Q9Y330 459 aaPredicted RBP9.9□□□□□ -0.83
FREM1-201ENST00000380875 PSMD14O00487 310 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 CPT1AP50416 773 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 RCN2Q14257 317 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 CAPRIN1Q14444 709 aaKnown RBP9.89□□□□□ -0.83
FREM1-201ENST00000380875 TMED2Q15363 201 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 MGAT5BQ3V5L5 792 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 MEI1Q5TIA1 1274 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 PADI6Q6TGC4 694 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 RMDN1Q96DB5 314 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 ZNF560Q96MR9 790 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.89□□□□□ -0.83
FREM1-201ENST00000380875 PLEKHG2Q9H7P9 1386 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 RRP9O43818 475 aaKnown RBP9.89□□□□□ -0.83
FREM1-201ENST00000380875 ZMYND10O75800 440 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 YY1P25490 414 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 PRDX5P30044 214 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 PDE1CQ14123 709 aaPredicted RBP9.89□□□□□ -0.83
FREM1-201ENST00000380875 ZNF235Q14590 738 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 TSNAXIP1Q2TAA8 658 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 EFHBQ8N7U6 833 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 NCLNQ969V3 563 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 YME1L1Q96TA2 773 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 TUBGCP2Q9BSJ2 902 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 SLC9A2Q9UBY0 812 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 UBE4BO95155 1302 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 USP6P35125 1406 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 SFNP31947 248 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 ALDH1A3P47895 512 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 MFSD4BQ5TF39 518 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 STKLD1Q8NE28 680 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 MAGOHBQ96A72 148 aaKnown RBP9.89□□□□□ -0.83
FREM1-201ENST00000380875 ULK4Q96C45 1275 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 PPFIA2O75334 1257 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 STMN1P16949 149 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 COPB1P53618 953 aaKnown RBP9.89□□□□□ -0.83
FREM1-201ENST00000380875 AP1B1Q10567 949 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 GTF3C2Q8WUA4 911 aaPredicted RBP9.89□□□□□ -0.83
FREM1-201ENST00000380875 DESI2Q9BSY9 194 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 XPO4Q9C0E2 1151 aaKnown RBP9.89□□□□□ -0.83
FREM1-201ENST00000380875 TNS3Q68CZ2 1445 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 ATP7BP35670 1465 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 TCOF1Q13428 1488 aaKnown RBP9.89□□□□□ -0.83
FREM1-201ENST00000380875 UBA6A0AVT1 1052 aaPredicted RBP9.89□□□□□ -0.83
FREM1-201ENST00000380875 PLCG1P19174 1290 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 SMYD4Q8IYR2 804 aaPredicted RBP9.89□□□□□ -0.83
FREM1-201ENST00000380875 TTLL11Q8NHH1 800 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 USP28Q96RU2 1077 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 TSSK1BQ9BXA7 367 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 TEKT2Q9UIF3 430 aa9.89□□□□□ -0.83
FREM1-201ENST00000380875 ITGA4P13612 1032 aa9.88□□□□□ -0.83
FREM1-201ENST00000380875 C10orf76Q5T2E6 689 aa9.88□□□□□ -0.83
FREM1-201ENST00000380875 SRRM1Q8IYB3 904 aaKnown RBP9.88□□□□□ -0.83
FREM1-201ENST00000380875 ANKRD13CQ8N6S4 541 aa9.88□□□□□ -0.83
FREM1-201ENST00000380875 ZNF280CQ8ND82 737 aa9.88□□□□□ -0.83
FREM1-201ENST00000380875 STAG1Q8WVM7 1258 aa9.88□□□□□ -0.83
FREM1-201ENST00000380875 ZNF512Q96ME7 567 aaPredicted RBP9.88□□□□□ -0.83
FREM1-201ENST00000380875 ASNSD1Q9NWL6 643 aa9.88□□□□□ -0.83
FREM1-201ENST00000380875 KLHL14Q9P2G3 628 aa9.88□□□□□ -0.83
FREM1-201ENST00000380875 UTYO14607 1347 aa9.88□□□□□ -0.83
FREM1-201ENST00000380875 HSPA8P11142 646 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms