RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 ADKP55263 362 aaKnown RBP11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 IFT88Q13099 833 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 LAMB3Q13751 1172 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 C1orf146Q5VVC0 180 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 SPTA1P02549 2419 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 GPIHBP1Q8IV16 184 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 PBKQ96KB5 322 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 STN1Q9H668 368 aaKnown RBP11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 KANSL2Q9H9L4 492 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 ABCA10Q8WWZ4 1543 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 TRAPPC10P48553 1259 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 CDC37Q16543 378 aaPredicted RBP11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 BEST2Q8NFU1 509 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 KLHL29Q96CT2 875 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 POLR2FP61218 127 aaKnown RBP11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 CEP78Q5JTW2 689 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 PGRMC1O00264 195 aaKnown RBP11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 AP1B1Q10567 949 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 MTHFSDQ2M296 383 aaKnown RBP11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 SNX30Q5VWJ9 437 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 ARMC2Q8NEN0 867 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 HAUS4Q9H6D7 363 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 DDX56Q9NY93 547 aaKnown RBP11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 NXF1Q9UBU9 619 aaKnown RBP11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 FAM170AA1A519 330 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 PI4K2BG5E9Z4 385 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 HSPA2P54652 639 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 PSMC1P62191 440 aaKnown RBP11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 RABGGTAQ92696 567 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 STAP1Q9ULZ2 295 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 TBC1D4O60343 1298 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 E2F5Q15329 346 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 SYDE2Q5VT97 1194 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 ALS2CLQ60I27 953 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 ANKRD49Q8WVL7 239 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 ZW10O43264 779 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 IL10P22301 178 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 KIAA0825Q8IV33 1275 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 WBP4O75554 376 aaKnown RBP11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 TRIM71Q2Q1W2 868 aaKnown RBP11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 FAM26FQ5R3K3 315 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 PLEKHA8Q96JA3 519 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 DCTPP1Q9H773 170 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 UNC13CQ8NB66 2214 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 C4BPBP20851 252 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 SPARCL1Q14515 664 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 TNIP2Q8NFZ5 429 aa11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 UBE2TQ9NPD8 197 aaPredicted RBP11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 APOBEC2Q9Y235 224 aaKnown RBP11.97□□□□□ -0.49
PTCHD1-201ENST00000379361 MAPK13O15264 365 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 EFTUD2Q15029 972 aaKnown RBP eCLIP11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 ZNF699Q32M78 642 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 SCARA5Q6ZMJ2 495 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 KPNA7A9QM74 516 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 PGBD3Q8N328 593 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 KRT38O76015 456 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 DYNC1I2Q13409 638 aaKnown RBP11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 CC2D2BQ6DHV5 1058 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 PDXDC2PQ6P474 469 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 PARVGQ9HBI0 331 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 NDFIP2Q9NV92 336 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 IGHDP01880 384 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 ZSCAN26Q16670 478 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 KRT78Q8N1N4 520 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 SPTBN1Q01082 2364 aaKnown RBP11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 ASAP2O43150 1006 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 RALBP11234 206 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 SPICE1Q8N0Z3 855 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 GPKOWQ92917 476 aaPredicted RBP eCLIP11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 GTSE1Q9NYZ3 720 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 SATB2Q9UPW6 733 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 PCM1Q15154 2024 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 CYP4A11Q02928 519 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 CDO1Q16878 200 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 CATSPER4Q7RTX7 472 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 USE1Q9NZ43 259 aa11.96□□□□□ -0.49
PTCHD1-201ENST00000379361 SFSWAPQ12872 951 aaKnown RBP11.96□□□□□ -0.5
PTCHD1-201ENST00000379361 ZC3H18Q86VM9 953 aaKnown RBP11.96□□□□□ -0.5
PTCHD1-201ENST00000379361 PLD3Q8IV08 490 aa11.96□□□□□ -0.5
PTCHD1-201ENST00000379361 H2AFY2Q9P0M6 372 aaPredicted RBP11.96□□□□□ -0.5
PTCHD1-201ENST00000379361 LEMD3Q9Y2U8 911 aa11.96□□□□□ -0.5
PTCHD1-201ENST00000379361 MRPS15P82914 257 aaKnown RBP11.96□□□□□ -0.5
PTCHD1-201ENST00000379361 FGD2Q7Z6J4 655 aa11.96□□□□□ -0.5
PTCHD1-201ENST00000379361 FAM49AQ9H0Q0 323 aaPredicted RBP11.96□□□□□ -0.5
PTCHD1-201ENST00000379361 TRPC7Q9HCX4 862 aa11.96□□□□□ -0.5
PTCHD1-201ENST00000379361 RNF14Q9UBS8 474 aa11.96□□□□□ -0.5
PTCHD1-201ENST00000379361 YEATS2Q9ULM3 1422 aa11.96□□□□□ -0.5
PTCHD1-201ENST00000379361 hCG_1984214I3L0E3 225 aa11.96□□□□□ -0.5
PTCHD1-201ENST00000379361 C8orf58Q8NAV2 365 aa11.96□□□□□ -0.5
PTCHD1-201ENST00000379361 FMO2Q99518 471 aa11.96□□□□□ -0.5
PTCHD1-201ENST00000379361 CASS4Q9NQ75 786 aa11.96□□□□□ -0.5
PTCHD1-201ENST00000379361 CYBBP04839 570 aa11.96□□□□□ -0.5
PTCHD1-201ENST00000379361 PLEKHM2Q8IWE5 1019 aa11.96□□□□□ -0.5
PTCHD1-201ENST00000379361 TRMT44Q8IYL2 757 aaKnown RBP11.96□□□□□ -0.5
PTCHD1-201ENST00000379361 GRIN2AQ12879 1464 aa11.96□□□□□ -0.5
PTCHD1-201ENST00000379361 IGSF3O75054 1194 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 ADCY1Q08828 1119 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 DPH5Q9H2P9 285 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 DYRK3O43781 588 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 ITPRIPL1Q6GPH6 555 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms