RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 ALKBH2Q6NS38 261 aa14.17□□□□□ -0.14
HIPK3-202ENST00000379016 SPICE1Q8N0Z3 855 aa14.17□□□□□ -0.14
HIPK3-202ENST00000379016 CLIC2O15247 247 aa14.17□□□□□ -0.14
HIPK3-202ENST00000379016 ECEL1O95672 775 aa14.17□□□□□ -0.14
HIPK3-202ENST00000379016 ARF4P18085 180 aaPredicted RBP14.17□□□□□ -0.14
HIPK3-202ENST00000379016 NRG3P56975 720 aa14.17□□□□□ -0.14
HIPK3-202ENST00000379016 SLC10A5Q5PT55 438 aa14.17□□□□□ -0.14
HIPK3-202ENST00000379016 GTPBP6O43824 516 aaPredicted RBP14.17□□□□□ -0.14
HIPK3-202ENST00000379016 H2AFZP0C0S5 128 aa14.17□□□□□ -0.14
HIPK3-202ENST00000379016 BPIFB4P59827 614 aa14.17□□□□□ -0.14
HIPK3-202ENST00000379016 TNFAIP1Q13829 316 aa14.17□□□□□ -0.14
HIPK3-202ENST00000379016 GTF2H3Q13889 308 aa14.17□□□□□ -0.14
HIPK3-202ENST00000379016 ALS2CLQ60I27 953 aa14.17□□□□□ -0.14
HIPK3-202ENST00000379016 DCAF15Q66K64 600 aa14.17□□□□□ -0.14
HIPK3-202ENST00000379016 H2AFVQ71UI9 128 aa14.17□□□□□ -0.14
HIPK3-202ENST00000379016 KIAA0825Q8IV33 1275 aa14.17□□□□□ -0.14
HIPK3-202ENST00000379016 TUBGCP3Q96CW5 907 aa14.17□□□□□ -0.14
HIPK3-202ENST00000379016 TRIM11Q96F44 468 aa14.17□□□□□ -0.14
HIPK3-202ENST00000379016 NPHP3Q7Z494 1330 aa14.17□□□□□ -0.14
HIPK3-202ENST00000379016 ATL3Q6DD88 541 aa14.17□□□□□ -0.14
HIPK3-202ENST00000379016 RASSF3Q86WH2 238 aa14.17□□□□□ -0.14
HIPK3-202ENST00000379016 TADA1Q96BN2 335 aa14.17□□□□□ -0.14
HIPK3-202ENST00000379016 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.17□□□□□ -0.14
HIPK3-202ENST00000379016 CNGA2Q16280 664 aa14.17□□□□□ -0.14
HIPK3-202ENST00000379016 SP110Q9HB58 689 aa14.17□□□□□ -0.14
HIPK3-202ENST00000379016 P4HA2O15460 535 aa14.16□□□□□ -0.14
HIPK3-202ENST00000379016 DDX5P17844 614 aaKnown RBP14.16□□□□□ -0.14
HIPK3-202ENST00000379016 SYTL3Q4VX76 610 aa14.16□□□□□ -0.14
HIPK3-202ENST00000379016 ARMC6Q6NXE6 501 aa14.16□□□□□ -0.14
HIPK3-202ENST00000379016 SLC13A1Q9BZW2 595 aa14.16□□□□□ -0.14
HIPK3-202ENST00000379016 MYLK2Q9H1R3 596 aa14.16□□□□□ -0.14
HIPK3-202ENST00000379016 RPF1Q9H9Y2 349 aaKnown RBP14.16□□□□□ -0.14
HIPK3-202ENST00000379016 NGRNQ9NPE2 291 aaKnown RBP14.16□□□□□ -0.14
HIPK3-202ENST00000379016 UBAP1Q9NZ09 502 aa14.16□□□□□ -0.14
HIPK3-202ENST00000379016 LRRC9Q6ZRR7 1453 aa14.16□□□□□ -0.14
HIPK3-202ENST00000379016 CYGBQ8WWM9 190 aa14.16□□□□□ -0.14
HIPK3-202ENST00000379016 LARP4BQ92615 738 aaKnown RBP14.16□□□□□ -0.14
HIPK3-202ENST00000379016 UBE2TQ9NPD8 197 aaPredicted RBP14.16□□□□□ -0.14
HIPK3-202ENST00000379016 ALDH18A1P54886 795 aaKnown RBP14.16□□□□□ -0.14
HIPK3-202ENST00000379016 NUDT18Q6ZVK8 323 aa14.16□□□□□ -0.14
HIPK3-202ENST00000379016 FAM49AQ9H0Q0 323 aaPredicted RBP14.16□□□□□ -0.14
HIPK3-202ENST00000379016 EPN3Q9H201 632 aa14.16□□□□□ -0.14
HIPK3-202ENST00000379016 GPBP1L1Q9HC44 474 aaPredicted RBP14.16□□□□□ -0.14
HIPK3-202ENST00000379016 SYNCRIPO60506 623 aaKnown RBP14.16□□□□□ -0.14
HIPK3-202ENST00000379016 A1BGP04217 495 aa14.16□□□□□ -0.14
HIPK3-202ENST00000379016 ZNF568Q3ZCX4 644 aa14.16□□□□□ -0.14
HIPK3-202ENST00000379016 PCDHA1Q9Y5I3 950 aa14.16□□□□□ -0.14
HIPK3-202ENST00000379016 EPRSP07814 1512 aaKnown RBP14.16□□□□□ -0.14
HIPK3-202ENST00000379016 PRR23AA6NEV1 266 aa14.16□□□□□ -0.14
HIPK3-202ENST00000379016 AP1B1Q10567 949 aa14.16□□□□□ -0.14
HIPK3-202ENST00000379016 MTERF2Q49AM1 385 aa14.16□□□□□ -0.14
HIPK3-202ENST00000379016 SPON2Q9BUD6 331 aa14.16□□□□□ -0.14
HIPK3-202ENST00000379016 DENND3A2RUS2 1198 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 ZNF577Q9BSK1 485 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 BIRC5O15392 142 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 CA4P22748 312 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 AP2B1P63010 937 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 DYNC1I2Q13409 638 aaKnown RBP14.15□□□□□ -0.14
HIPK3-202ENST00000379016 MRPL39Q9NYK5 338 aaKnown RBP14.15□□□□□ -0.14
HIPK3-202ENST00000379016 SPATA2Q9UM82 520 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 HPCAP84074 193 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 NME3Q13232 169 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 CUL4AQ13619 759 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 CC2D1AQ6P1N0 951 aaPredicted RBP14.15□□□□□ -0.14
HIPK3-202ENST00000379016 CHSY1Q86X52 802 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 CCDC103Q8IW40 242 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 WDR75Q8IWA0 830 aaKnown RBP14.15□□□□□ -0.14
HIPK3-202ENST00000379016 CLEC4FQ8N1N0 589 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 COL4A3BPQ9Y5P4 624 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 IQCA1LA6NCM1 817 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 COPEO14579 308 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 ZNF197O14709 1029 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 PSMA2P25787 234 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 ERFP50548 548 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 RPS6P62753 249 aaKnown RBP14.15□□□□□ -0.14
HIPK3-202ENST00000379016 CCNA1P78396 465 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 RUNX1T1Q06455 604 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 RBBP4Q09028 425 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 SPRTNQ9H040 489 aaPredicted RBP14.15□□□□□ -0.14
HIPK3-202ENST00000379016 NSMCE4AQ9NXX6 385 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 GSPT1P15170 499 aaKnown RBP14.15□□□□□ -0.14
HIPK3-202ENST00000379016 SERPINB4P48594 390 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 SLC7A5Q01650 507 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 SPATA1Q5VX52 437 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 N6AMT1Q9Y5N5 214 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 TK2O00142 265 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 GABPB1Q06547 395 aaPredicted RBP14.15□□□□□ -0.14
HIPK3-202ENST00000379016 CENPPQ6IPU0 288 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 TSPYL6Q8N831 410 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 SLC7A3Q8WY07 619 aa14.15□□□□□ -0.14
HIPK3-202ENST00000379016 ZNF215Q9UL58 517 aaPredicted RBP14.15□□□□□ -0.14
HIPK3-202ENST00000379016 TMEM232C9JQI7 657 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 MDH1BQ5I0G3 518 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 FAM47EQ6ZV65 393 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 HEATR4Q86WZ0 1026 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 SAAL1Q96ER3 474 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 ATP8A2Q9NTI2 1148 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 PCDHGA3Q9Y5H0 932 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 ABCC11Q96J66 1382 aa14.14□□□□□ -0.15
HIPK3-202ENST00000379016 RGS5O15539 181 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms