RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 MORC4Q8TE76 937 aa19.11■□□□□ 0.65
THUMPD2-201ENST00000378727 C16orf45Q96MC5 204 aaPredicted RBP19.11■□□□□ 0.65
THUMPD2-201ENST00000378727 CAPN11Q9UMQ6 739 aa19.11■□□□□ 0.65
THUMPD2-201ENST00000378727 TRPM7Q96QT4 1865 aa19.11■□□□□ 0.65
THUMPD2-201ENST00000378727 IGKV6D-21A0A0A0MT36 114 aa19.1■□□□□ 0.65
THUMPD2-201ENST00000378727 CLIC2O15247 247 aa19.1■□□□□ 0.65
THUMPD2-201ENST00000378727 ARIH2O95376 493 aa19.1■□□□□ 0.65
THUMPD2-201ENST00000378727 TGFB3P10600 412 aa19.1■□□□□ 0.65
THUMPD2-201ENST00000378727 MAPTP10636 758 aaKnown RBP19.1■□□□□ 0.65
THUMPD2-201ENST00000378727 KRT9P35527 623 aa19.1■□□□□ 0.65
THUMPD2-201ENST00000378727 DNTTIP2Q5QJE6 756 aaKnown RBP19.1■□□□□ 0.65
THUMPD2-201ENST00000378727 STXBP4Q6ZWJ1 553 aa19.1■□□□□ 0.65
THUMPD2-201ENST00000378727 CEP170P1Q96L14 293 aa19.1■□□□□ 0.65
THUMPD2-201ENST00000378727 DRC1Q96MC2 740 aa19.1■□□□□ 0.65
THUMPD2-201ENST00000378727 PCDHB13Q9Y5F0 798 aa19.1■□□□□ 0.65
THUMPD2-201ENST00000378727 MAFBQ9Y5Q3 323 aaPredicted RBP19.1■□□□□ 0.65
THUMPD2-201ENST00000378727 PLXNA1Q9UIW2 1896 aa19.1■□□□□ 0.65
THUMPD2-201ENST00000378727 GSTTP1A0A1W2PQM5 241 aa19.1■□□□□ 0.65
THUMPD2-201ENST00000378727 K7ENM7 598 aa19.1■□□□□ 0.65
THUMPD2-201ENST00000378727 AKAP3O75969 853 aa19.1■□□□□ 0.65
THUMPD2-201ENST00000378727 CCNA1P78396 465 aa19.1■□□□□ 0.65
THUMPD2-201ENST00000378727 LY6KQ17RY6 165 aa19.1■□□□□ 0.65
THUMPD2-201ENST00000378727 CCDC155Q8N6L0 562 aa19.1■□□□□ 0.65
THUMPD2-201ENST00000378727 PPP1R13BQ96KQ4 1090 aa19.1■□□□□ 0.65
THUMPD2-201ENST00000378727 MPHOSPH6Q99547 160 aaKnown RBP19.1■□□□□ 0.65
THUMPD2-201ENST00000378727 MORF4L1Q9UBU8 362 aa19.1■□□□□ 0.65
THUMPD2-201ENST00000378727 SOWAHDA6NJG2 315 aa19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 GCLCP48506 637 aaPredicted RBP19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 CASP4P49662 377 aa19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 NEDD9Q14511 834 aa19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 MTF1Q14872 753 aa19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 NFIL3Q16649 462 aa19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 FAM102BQ5T8I3 360 aa19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 NYAP1Q6ZVC0 841 aa19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 RETREG2Q8NC44 543 aa19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 PCYT2Q99447 389 aa19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 NUP58Q9BVL2 599 aa19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 NAA15Q9BXJ9 866 aaKnown RBP19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 ZNF302Q9NR11 478 aa19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 PDLIM7Q9NR12 457 aa19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 AGPAT5Q9NUQ2 364 aa19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 SEPT9Q9UHD8 586 aaPredicted RBP19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 DDX41Q9UJV9 622 aaKnown RBP19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 GGPS1O95749 300 aa19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 TRIM21P19474 475 aaKnown RBP19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 RPL13P26373 211 aaKnown RBP19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 FIGNQ5HY92 759 aa19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 TOGARAM2Q6ZUX3 1019 aa19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 FRMD5Q7Z6J6 570 aa19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 DNAJC7Q99615 494 aa19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 CYP26B1Q9NR63 512 aa19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 LUC7L2Q9Y383 392 aaKnown RBP19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.09■□□□□ 0.65
THUMPD2-201ENST00000378727 PEX3P56589 373 aa19.08■□□□□ 0.64
THUMPD2-201ENST00000378727 SOX10P56693 466 aa19.08■□□□□ 0.64
THUMPD2-201ENST00000378727 HUNKP57058 714 aa19.08■□□□□ 0.64
THUMPD2-201ENST00000378727 XKR3Q5GH77 459 aa19.08■□□□□ 0.64
THUMPD2-201ENST00000378727 METTL7BQ6UX53 244 aa19.08■□□□□ 0.64
THUMPD2-201ENST00000378727 RAD9BQ6WBX8 426 aa19.08■□□□□ 0.64
THUMPD2-201ENST00000378727 FBXO16Q8IX29 292 aaPredicted RBP19.08■□□□□ 0.64
THUMPD2-201ENST00000378727 PCMTD1Q96MG8 357 aaPredicted RBP19.08■□□□□ 0.64
THUMPD2-201ENST00000378727 GBP3Q9H0R5 595 aa19.08■□□□□ 0.64
THUMPD2-201ENST00000378727 AGPAT3Q9NRZ7 376 aa19.08■□□□□ 0.64
THUMPD2-201ENST00000378727 EPHB6O15197 1021 aa19.07■□□□□ 0.64
THUMPD2-201ENST00000378727 KCNMA1Q12791 1236 aa19.07■□□□□ 0.64
THUMPD2-201ENST00000378727 CHADLQ6NUI6 762 aa19.07■□□□□ 0.64
THUMPD2-201ENST00000378727 ST6GALNAC4Q9H4F1 302 aa19.07■□□□□ 0.64
THUMPD2-201ENST00000378727 XPNPEP1Q9NQW7 623 aa19.07■□□□□ 0.64
THUMPD2-201ENST00000378727 LOC102724159A0A0B4J2E5 919 aa19.07■□□□□ 0.64
THUMPD2-201ENST00000378727 SLC16A3O15427 465 aaKnown RBP19.07■□□□□ 0.64
THUMPD2-201ENST00000378727 ADORA2AP29274 412 aa19.07■□□□□ 0.64
THUMPD2-201ENST00000378727 NCKAP1LP55160 1127 aa19.07■□□□□ 0.64
THUMPD2-201ENST00000378727 GTF2BQ00403 316 aa19.07■□□□□ 0.64
THUMPD2-201ENST00000378727 ALCAMQ13740 583 aa19.07■□□□□ 0.64
THUMPD2-201ENST00000378727 PWP2Q15269 919 aaKnown RBP19.07■□□□□ 0.64
THUMPD2-201ENST00000378727 ZNF792Q3KQV3 632 aa19.07■□□□□ 0.64
THUMPD2-201ENST00000378727 HAUS6Q7Z4H7 955 aa19.07■□□□□ 0.64
THUMPD2-201ENST00000378727 OR8K1Q8NGG5 319 aa19.07■□□□□ 0.64
THUMPD2-201ENST00000378727 BSNDQ8WZ55 320 aa19.07■□□□□ 0.64
THUMPD2-201ENST00000378727 BORCS6Q96GS4 357 aa19.07■□□□□ 0.64
THUMPD2-201ENST00000378727 DMAC2Q9NW81 257 aa19.07■□□□□ 0.64
THUMPD2-201ENST00000378727 ARMCX3Q9UH62 379 aaPredicted RBP19.07■□□□□ 0.64
THUMPD2-201ENST00000378727 FAM184BQ9ULE4 1060 aa19.07■□□□□ 0.64
THUMPD2-201ENST00000378727 A0A1W2PQJ5 194 aa19.06■□□□□ 0.64
THUMPD2-201ENST00000378727 SLC16A4O15374 487 aa19.06■□□□□ 0.64
THUMPD2-201ENST00000378727 DGAT1O75907 488 aa19.06■□□□□ 0.64
THUMPD2-201ENST00000378727 OATP04181 439 aa19.06■□□□□ 0.64
THUMPD2-201ENST00000378727 MTERF2Q49AM1 385 aa19.06■□□□□ 0.64
THUMPD2-201ENST00000378727 CCDC62Q6P9F0 684 aa19.06■□□□□ 0.64
THUMPD2-201ENST00000378727 KCNV1Q6PIU1 500 aa19.06■□□□□ 0.64
THUMPD2-201ENST00000378727 HS2ST1Q7LGA3 356 aa19.06■□□□□ 0.64
THUMPD2-201ENST00000378727 REXO1L1PQ8IX06 675 aa19.06■□□□□ 0.64
THUMPD2-201ENST00000378727 PARK7Q99497 189 aaKnown RBP19.06■□□□□ 0.64
THUMPD2-201ENST00000378727 FAM207AQ9NSI2 230 aaPredicted RBP19.06■□□□□ 0.64
THUMPD2-201ENST00000378727 PPP2R2CQ9Y2T4 447 aa19.06■□□□□ 0.64
THUMPD2-201ENST00000378727 R3HCC1Q9Y3T6 440 aaKnown RBP19.06■□□□□ 0.64
THUMPD2-201ENST00000378727 TNNT1P13805 278 aa19.05■□□□□ 0.64
THUMPD2-201ENST00000378727 NPTX2P47972 431 aa19.05■□□□□ 0.64
THUMPD2-201ENST00000378727 CELF3Q5SZQ8 465 aaKnown RBP19.05■□□□□ 0.64
THUMPD2-201ENST00000378727 TMEM63BQ5T3F8 832 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms