RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 DDTLA6NHG4 134 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-203ENST00000378169 GOLGA8KD6RF30 607 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 CAPN9O14815 690 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 SRGNP10124 158 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 ALDH3A1P30838 453 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 CCT5P48643 541 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 EVX2Q03828 476 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 GRIK5Q16478 980 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 LMBRD2Q68DH5 695 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-203ENST00000378169 RSBN1LQ6PCB5 846 aaPredicted RBP14.26□□□□□ -0.13
NPHP4-203ENST00000378169 SAMD7Q7Z3H4 446 aa14.26□□□□□ -0.13
NPHP4-203ENST00000378169 VAMP7P51809 220 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 CROCCP2Q86T23 111 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 VSIG1Q86XK7 387 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 PALM2Q8IXS6 379 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 ANKRD36BP1Q96IX9 119 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 AGBL1Q96MI9 1066 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.25□□□□□ -0.136e-6■■■■■ 34.1
NPHP4-203ENST00000378169 MRFAP1Q9Y605 127 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 ZNF185O15231 689 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 CLDN3O15551 220 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 ALCAMQ13740 583 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 EPHA7Q15375 998 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 C10orf76Q5T2E6 689 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 LRP10Q7Z4F1 713 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 FAM151AQ8WW52 585 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 NLRP7Q8WX94 980 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 SLC10A4Q96EP9 437 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 OSBPL9Q96SU4 736 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 JPH2Q9BR39 696 aaPredicted RBP14.25□□□□□ -0.13
NPHP4-203ENST00000378169 EMSYQ7Z589 1322 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 CEP128Q6ZU80 1094 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 PBKQ96KB5 322 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 SMC6Q96SB8 1091 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 NBPF3Q9H094 633 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 DDX47Q9H0S4 455 aaKnown RBP14.25□□□□□ -0.13
NPHP4-203ENST00000378169 SPC25Q9HBM1 224 aa14.25□□□□□ -0.13
NPHP4-203ENST00000378169 POC1B-GALNT4F8VUJ3 575 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 MYBP10242 640 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 OSBPP22059 807 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 HOXA7P31268 230 aaPredicted RBP14.24□□□□□ -0.13
NPHP4-203ENST00000378169 PSMC5P62195 406 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 CALN1Q9BXU9 219 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 PLCB1Q9NQ66 1216 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 MKRN1Q9UHC7 482 aaKnown RBP14.24□□□□□ -0.13
NPHP4-203ENST00000378169 LRRD1A4D1F6 860 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 TADA3O75528 432 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 DPEP1P16444 411 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 TAL1P17542 331 aaPredicted RBP14.24□□□□□ -0.13
NPHP4-203ENST00000378169 EZH2Q15910 746 aaKnown RBP14.24□□□□□ -0.13
NPHP4-203ENST00000378169 CCDC14Q49A88 953 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 DNAJC24Q6P3W2 148 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 FBXL16Q8N461 479 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 GPATCH11Q8N954 259 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 GRK7Q8WTQ7 553 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 MED10Q9BTT4 135 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 ATP6V0A4Q9HBG4 840 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 HOMER3Q9NSC5 361 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 ANAPC7Q9UJX3 599 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 ANO9A1A5B4 782 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 STAMBPO95630 424 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 SLC9A1P19634 815 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 NCAPHQ15003 741 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 PDXDC1Q6P996 788 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 SLC30A10Q6XR72 485 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 ARMC9Q7Z3E5 817 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 SEL1LQ9UBV2 794 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 SALL1Q9NSC2 1324 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 CAMTA1Q9Y6Y1 1673 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 KIF13AQ9H1H9 1805 aa14.24□□□□□ -0.13
NPHP4-203ENST00000378169 ESYT2A0FGR8 921 aa14.23□□□□□ -0.13
NPHP4-203ENST00000378169 H7C0C1 242 aa14.23□□□□□ -0.13
NPHP4-203ENST00000378169 ATP5OP48047 213 aa14.23□□□□□ -0.13
NPHP4-203ENST00000378169 ITIH3Q06033 890 aa14.23□□□□□ -0.13
NPHP4-203ENST00000378169 CNOT8Q9UFF9 292 aaKnown RBP14.23□□□□□ -0.13
NPHP4-203ENST00000378169 PCDHA10Q9Y5I2 948 aa14.23□□□□□ -0.13
NPHP4-203ENST00000378169 SGK1O00141 431 aa14.23□□□□□ -0.13
NPHP4-203ENST00000378169 TMEM270Q6UE05 265 aa14.23□□□□□ -0.13
NPHP4-203ENST00000378169 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.23□□□□□ -0.13
NPHP4-203ENST00000378169 SNX24Q9Y343 169 aa14.23□□□□□ -0.13
NPHP4-203ENST00000378169 NUB1Q9Y5A7 615 aa14.23□□□□□ -0.13
NPHP4-203ENST00000378169 PDXKO00764 312 aa14.23□□□□□ -0.13
NPHP4-203ENST00000378169 STK10O94804 968 aaKnown RBP14.23□□□□□ -0.13
NPHP4-203ENST00000378169 SLURP2P0DP57 97 aa14.23□□□□□ -0.13
NPHP4-203ENST00000378169 CATSPER3Q86XQ3 398 aa14.23□□□□□ -0.13
NPHP4-203ENST00000378169 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.23□□□□□ -0.13
NPHP4-203ENST00000378169 HEMGNQ9BXL5 484 aa14.23□□□□□ -0.13
NPHP4-203ENST00000378169 FAM114A2Q9NRY5 505 aa14.23□□□□□ -0.13
NPHP4-203ENST00000378169 ECEL1O95672 775 aa14.23□□□□□ -0.13
NPHP4-203ENST00000378169 FTLP02792 175 aaPredicted RBP14.23□□□□□ -0.13
NPHP4-203ENST00000378169 YWHABP31946 246 aaKnown RBP14.23□□□□□ -0.13
NPHP4-203ENST00000378169 CCDC13Q8IYE1 715 aa14.23□□□□□ -0.13
NPHP4-203ENST00000378169 RPUSD2Q8IZ73 545 aaKnown RBP14.23□□□□□ -0.13
NPHP4-203ENST00000378169 FMO2Q99518 471 aa14.23□□□□□ -0.13
NPHP4-203ENST00000378169 C11orf70Q9BRQ4 267 aa14.23□□□□□ -0.13
NPHP4-203ENST00000378169 ACAD9Q9H845 621 aa14.23□□□□□ -0.13
NPHP4-203ENST00000378169 RNF181Q9P0P0 153 aa14.23□□□□□ -0.13
NPHP4-203ENST00000378169 PPFIA4O75335 1185 aa14.22□□□□□ -0.13
NPHP4-203ENST00000378169 MAPK6Q16659 721 aa14.22□□□□□ -0.13
NPHP4-203ENST00000378169 CFAP157Q5JU67 520 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms