RNA–Protein interactions for RNA: ENST00000377533.7

SCRIB-203, Transcript of scribbled planar cell polarity protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCRIB, Length 5,108 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-203ENST00000377533 SNX1Q13596 522 aa18.37■□□□□ 0.53
SCRIB-203ENST00000377533 TSNAXIP1Q2TAA8 658 aa18.37■□□□□ 0.53
SCRIB-203ENST00000377533 MAP3K21Q5TCX8 1036 aa18.37■□□□□ 0.53
SCRIB-203ENST00000377533 FBXO33Q7Z6M2 555 aa18.37■□□□□ 0.53
SCRIB-203ENST00000377533 DNAAF3Q8N9W5 541 aa18.37■□□□□ 0.53
SCRIB-203ENST00000377533 GOLPH3LQ9H4A5 285 aa18.37■□□□□ 0.53
SCRIB-203ENST00000377533 DONSONQ9NYP3 566 aa18.37■□□□□ 0.53
SCRIB-203ENST00000377533 MIF4GDA9UHW6 222 aaKnown RBP18.37■□□□□ 0.53
SCRIB-203ENST00000377533 COG2Q14746 738 aa18.37■□□□□ 0.53
SCRIB-203ENST00000377533 DIS3Q9Y2L1 958 aaKnown RBP18.37■□□□□ 0.53
SCRIB-203ENST00000377533 KIAA1210Q9ULL0 1709 aa18.36■□□□□ 0.53
SCRIB-203ENST00000377533 ITPK1Q13572 414 aa18.36■□□□□ 0.53
SCRIB-203ENST00000377533 MICALL2Q8IY33 904 aa18.36■□□□□ 0.53
SCRIB-203ENST00000377533 EFCAB13Q8IY85 973 aa18.36■□□□□ 0.53
SCRIB-203ENST00000377533 ADAM22Q9P0K1 906 aa18.36■□□□□ 0.53
SCRIB-203ENST00000377533 CNOT7Q9UIV1 285 aaKnown RBP18.36■□□□□ 0.53
SCRIB-203ENST00000377533 TTC39CQ8N584 583 aa18.36■□□□□ 0.53
SCRIB-203ENST00000377533 ZNF609O15014 1411 aa18.36■□□□□ 0.53
SCRIB-203ENST00000377533 TRIM49BA6NDI0 452 aa18.36■□□□□ 0.53
SCRIB-203ENST00000377533 C19orf81C9J6K1 198 aa18.36■□□□□ 0.53
SCRIB-203ENST00000377533 HOXD10P28358 340 aa18.36■□□□□ 0.53
SCRIB-203ENST00000377533 PCK1P35558 622 aa18.36■□□□□ 0.53
SCRIB-203ENST00000377533 GCLMP48507 274 aa18.36■□□□□ 0.53
SCRIB-203ENST00000377533 IL9RQ01113 521 aa18.36■□□□□ 0.53
SCRIB-203ENST00000377533 ELMSAN1Q6PJG2 1045 aa18.36■□□□□ 0.53
SCRIB-203ENST00000377533 C4orf50Q6ZRC1 276 aa18.36■□□□□ 0.53
SCRIB-203ENST00000377533 CACYBPQ9HB71 228 aaKnown RBP18.36■□□□□ 0.53
SCRIB-203ENST00000377533 CCDC188H7C350 402 aa18.36■□□□□ 0.53
SCRIB-203ENST00000377533 KDM6AO15550 1401 aaPredicted RBP18.36■□□□□ 0.53
SCRIB-203ENST00000377533 SAT1P21673 171 aa18.36■□□□□ 0.53
SCRIB-203ENST00000377533 CASP1P29466 404 aa18.36■□□□□ 0.53
SCRIB-203ENST00000377533 HMGCS2P54868 508 aa18.36■□□□□ 0.53
SCRIB-203ENST00000377533 PSMD6Q15008 389 aa18.36■□□□□ 0.53
SCRIB-203ENST00000377533 EIF2AK1Q9BQI3 630 aaKnown RBP18.36■□□□□ 0.53
SCRIB-203ENST00000377533 NRXN1Q9ULB1 1477 aa18.35■□□□□ 0.53
SCRIB-203ENST00000377533 A0A0G2JLW4 131 aa18.35■□□□□ 0.53
SCRIB-203ENST00000377533 BUB1BO60566 1050 aaPredicted RBP18.35■□□□□ 0.53
SCRIB-203ENST00000377533 TBXAS1P24557 533 aaPredicted RBP18.35■□□□□ 0.53
SCRIB-203ENST00000377533 CXCR5P32302 372 aa18.35■□□□□ 0.53
SCRIB-203ENST00000377533 DYNLT1P63172 113 aa18.35■□□□□ 0.53
SCRIB-203ENST00000377533 TWF2Q6IBS0 349 aaKnown RBP18.35■□□□□ 0.53
SCRIB-203ENST00000377533 BEST2Q8NFU1 509 aa18.35■□□□□ 0.53
SCRIB-203ENST00000377533 ZNF699Q32M78 642 aa18.35■□□□□ 0.53
SCRIB-203ENST00000377533 STYK1Q6J9G0 422 aa18.35■□□□□ 0.53
SCRIB-203ENST00000377533 TRIM42Q8IWZ5 723 aa18.35■□□□□ 0.53
SCRIB-203ENST00000377533 THEM5Q8N1Q8 247 aa18.35■□□□□ 0.53
SCRIB-203ENST00000377533 NUF2Q9BZD4 464 aa18.35■□□□□ 0.53
SCRIB-203ENST00000377533 BASP1P80723 227 aaKnown RBP18.35■□□□□ 0.53
SCRIB-203ENST00000377533 IGDCC4Q8TDY8 1250 aa18.35■□□□□ 0.53
SCRIB-203ENST00000377533 FAM213AQ9BRX8 229 aa18.35■□□□□ 0.53
SCRIB-203ENST00000377533 TUFT1Q9NNX1 390 aa18.35■□□□□ 0.53
SCRIB-203ENST00000377533 TTC1Q99614 292 aa18.35■□□□□ 0.53
SCRIB-203ENST00000377533 TEX13BQ9BXU2 312 aa18.35■□□□□ 0.53
SCRIB-203ENST00000377533 MRPL4Q9BYD3 311 aaKnown RBP18.35■□□□□ 0.53
SCRIB-203ENST00000377533 CCSER1Q9C0I3 900 aa18.35■□□□□ 0.53
SCRIB-203ENST00000377533 PDE11AQ9HCR9 933 aa18.35■□□□□ 0.53
SCRIB-203ENST00000377533 INTS9Q9NV88 658 aaKnown RBP18.35■□□□□ 0.53
SCRIB-203ENST00000377533 EYA4O95677 639 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 PHLDB2Q86SQ0 1253 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.34■□□□□ 0.53
SCRIB-203ENST00000377533 BCAS4Q8TDM0 211 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 FAM151AQ8WW52 585 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 HUS1O60921 280 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 CIITAP33076 1130 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 VAMP7P51809 220 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 KCNB1Q14721 858 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 NXNQ6DKJ4 435 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 SMIM5Q71RC9 77 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 ATP8A1Q9Y2Q0 1164 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 NDUFB10O96000 172 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 SF3A3Q12874 501 aaKnown RBP eCLIP18.34■□□□□ 0.537e-7■■■□□ 19.2
SCRIB-203ENST00000377533 RSBN1LQ6PCB5 846 aaPredicted RBP18.34■□□□□ 0.53
SCRIB-203ENST00000377533 SLC16A10Q8TF71 515 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 PDLIM2Q96JY6 352 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 HINFPQ9BQA5 517 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 STRIP2Q9ULQ0 834 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 PSMA2P25787 234 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 GPC3P51654 580 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 TKFCQ3LXA3 575 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 CDC42EP5Q6NZY7 148 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 C16orf86Q6ZW13 317 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 WHAMMQ8TF30 809 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 SPATA33Q96N06 139 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 RAB3IPQ96QF0 476 aaPredicted RBP18.34■□□□□ 0.53
SCRIB-203ENST00000377533 TIPINQ9BVW5 301 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 NGRNQ9NPE2 291 aaKnown RBP18.34■□□□□ 0.53
SCRIB-203ENST00000377533 ABHD10Q9NUJ1 306 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 SLC9A2Q9UBY0 812 aa18.34■□□□□ 0.53
SCRIB-203ENST00000377533 PIK3C2BO00750 1634 aa18.33■□□□□ 0.53
SCRIB-203ENST00000377533 ZC3H13Q5T200 1668 aaKnown RBP18.33■□□□□ 0.53
SCRIB-203ENST00000377533 CALB1P05937 261 aa18.33■□□□□ 0.53
SCRIB-203ENST00000377533 MSH2P43246 934 aa18.33■□□□□ 0.53
SCRIB-203ENST00000377533 CYP4F22Q6NT55 531 aa18.33■□□□□ 0.53
SCRIB-203ENST00000377533 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.33■□□□□ 0.53
SCRIB-203ENST00000377533 CNOT8Q9UFF9 292 aaKnown RBP18.33■□□□□ 0.53
SCRIB-203ENST00000377533 ESYT2A0FGR8 921 aa18.33■□□□□ 0.52
SCRIB-203ENST00000377533 DHX9Q08211 1270 aaKnown RBP18.33■□□□□ 0.52
SCRIB-203ENST00000377533 ASPHQ12797 758 aa18.33■□□□□ 0.52
SCRIB-203ENST00000377533 SHC4Q6S5L8 630 aa18.33■□□□□ 0.52
SCRIB-203ENST00000377533 POLR3FQ9H1D9 316 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms