RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.58■□□□□ 0.09
TNFRSF1B-201ENST00000376259 COL1A1P02452 1464 aaPredicted RBP15.58■□□□□ 0.09
TNFRSF1B-201ENST00000376259 MEFVO15553 781 aaPredicted RBP15.58■□□□□ 0.08
TNFRSF1B-201ENST00000376259 FTLP02792 175 aaPredicted RBP15.58■□□□□ 0.08
TNFRSF1B-201ENST00000376259 BMP3P12645 472 aa15.58■□□□□ 0.08
TNFRSF1B-201ENST00000376259 GCFC2P16383 781 aaKnown RBP15.58■□□□□ 0.08
TNFRSF1B-201ENST00000376259 C1orf54Q8WWF1 131 aa15.58■□□□□ 0.08
TNFRSF1B-201ENST00000376259 ZNF653Q96CK0 615 aa15.58■□□□□ 0.08
TNFRSF1B-201ENST00000376259 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.58■□□□□ 0.08
TNFRSF1B-201ENST00000376259 PLCB1Q9NQ66 1216 aa15.58■□□□□ 0.08
TNFRSF1B-201ENST00000376259 HAUS2Q9NVX0 235 aa15.58■□□□□ 0.08
TNFRSF1B-201ENST00000376259 CHD2O14647 1828 aaKnown RBP15.58■□□□□ 0.08
TNFRSF1B-201ENST00000376259 GPR75-ASB3A0A0A6YYF3 556 aa15.58■□□□□ 0.08
TNFRSF1B-201ENST00000376259 GMNCA6NCL1 334 aa15.58■□□□□ 0.08
TNFRSF1B-201ENST00000376259 BCRP11274 1271 aa15.58■□□□□ 0.08
TNFRSF1B-201ENST00000376259 FERP16591 822 aa15.58■□□□□ 0.08
TNFRSF1B-201ENST00000376259 FLT3P36888 993 aa15.58■□□□□ 0.08
TNFRSF1B-201ENST00000376259 MIER3Q7Z3K6 550 aa15.58■□□□□ 0.08
TNFRSF1B-201ENST00000376259 HOOK3Q86VS8 718 aa15.58■□□□□ 0.08
TNFRSF1B-201ENST00000376259 SAAL1Q96ER3 474 aa15.58■□□□□ 0.08
TNFRSF1B-201ENST00000376259 CEP63Q96MT8 703 aa15.58■□□□□ 0.08
TNFRSF1B-201ENST00000376259 TTYH3Q9C0H2 523 aa15.58■□□□□ 0.08
TNFRSF1B-201ENST00000376259 HMGB1P1B2RPK0 211 aaPredicted RBP15.57■□□□□ 0.08
TNFRSF1B-201ENST00000376259 TISP43B9A030 160 aa15.57■□□□□ 0.08
TNFRSF1B-201ENST00000376259 MMEP08473 750 aa15.57■□□□□ 0.08
TNFRSF1B-201ENST00000376259 PON1P27169 355 aa15.57■□□□□ 0.08
TNFRSF1B-201ENST00000376259 FXR2P51116 673 aaKnown RBP eCLIP15.57■□□□□ 0.08
TNFRSF1B-201ENST00000376259 MTMR3Q13615 1198 aa15.57■□□□□ 0.08
TNFRSF1B-201ENST00000376259 CDC42EP5Q6NZY7 148 aa15.57■□□□□ 0.08
TNFRSF1B-201ENST00000376259 FAM47EQ6ZV65 393 aa15.57■□□□□ 0.08
TNFRSF1B-201ENST00000376259 KCPQ6ZWJ8 1503 aa15.57■□□□□ 0.08
TNFRSF1B-201ENST00000376259 DAGLBQ8NCG7 672 aa15.57■□□□□ 0.08
TNFRSF1B-201ENST00000376259 PBKQ96KB5 322 aa15.57■□□□□ 0.08
TNFRSF1B-201ENST00000376259 UBXN6Q9BZV1 441 aa15.57■□□□□ 0.08
TNFRSF1B-201ENST00000376259 RNF14Q9UBS8 474 aa15.57■□□□□ 0.08
TNFRSF1B-201ENST00000376259 RAD17O75943 681 aa15.57■□□□□ 0.08
TNFRSF1B-201ENST00000376259 CALCAP01258 141 aa15.57■□□□□ 0.08
TNFRSF1B-201ENST00000376259 ADCY8P40145 1251 aa15.57■□□□□ 0.08
TNFRSF1B-201ENST00000376259 CRKP46108 304 aa15.57■□□□□ 0.08
TNFRSF1B-201ENST00000376259 EFCC1Q9HA90 598 aa15.57■□□□□ 0.08
TNFRSF1B-201ENST00000376259 PRKG1Q13976 671 aa15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 SYDE2Q5VT97 1194 aa15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 PASD1Q8IV76 773 aa15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 TRIM59Q8IWR1 403 aa15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 MYCBPAPQ8TBZ2 947 aa15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 HAUS1Q96CS2 278 aa15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 THAP2Q9H0W7 228 aa15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 EPN3Q9H201 632 aa15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 AARSP49588 968 aaKnown RBP eCLIP15.56■□□□□ 0.084e-6■■■■■ 30.6
TNFRSF1B-201ENST00000376259 CLNS1AP54105 237 aaKnown RBP15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 GLE1Q53GS7 698 aaKnown RBP15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 XKR9Q5GH70 373 aa15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 MCTP2Q6DN12 878 aa15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 CEP83Q9Y592 693 aa15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 BZW2Q9Y6E2 419 aaKnown RBP15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 ABCB11O95342 1321 aa15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 POC1B-GALNT4F8VUJ3 575 aa15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 ATF7P17544 494 aaPredicted RBP15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 ERFP50548 548 aa15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 PEX3P56589 373 aa15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 PPP2R2AP63151 447 aa15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 PTGISQ16647 500 aa15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 WDR78Q5VTH9 848 aa15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 ZNF365Q70YC5 407 aa15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 OGFOD1Q8N543 542 aa15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 NEK9Q8TD19 979 aa15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 MTMR9Q96QG7 549 aa15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 NAP1L3Q99457 506 aaPredicted RBP15.56■□□□□ 0.08
TNFRSF1B-201ENST00000376259 TMEM150BA6NC51 233 aa15.55■□□□□ 0.08
TNFRSF1B-201ENST00000376259 POLR2MP0CAP2 368 aa15.55■□□□□ 0.08
TNFRSF1B-201ENST00000376259 EIF2AK2P19525 551 aaKnown RBP15.55■□□□□ 0.08
TNFRSF1B-201ENST00000376259 DNAJC19Q96DA6 116 aa15.55■□□□□ 0.08
TNFRSF1B-201ENST00000376259 CYFIP2Q96F07 1278 aa15.55■□□□□ 0.08
TNFRSF1B-201ENST00000376259 PLEKHG2Q9H7P9 1386 aa15.55■□□□□ 0.08
TNFRSF1B-201ENST00000376259 EMSYQ7Z589 1322 aa15.55■□□□□ 0.08
TNFRSF1B-201ENST00000376259 DCDC2CA8MYV0 355 aa15.55■□□□□ 0.08
TNFRSF1B-201ENST00000376259 PPP1R11O60927 126 aaPredicted RBP15.55■□□□□ 0.08
TNFRSF1B-201ENST00000376259 BBOX1O75936 387 aa15.55■□□□□ 0.08
TNFRSF1B-201ENST00000376259 NDUFB10O96000 172 aa15.55■□□□□ 0.08
TNFRSF1B-201ENST00000376259 TNNI1P19237 187 aa15.55■□□□□ 0.08
TNFRSF1B-201ENST00000376259 FIGNQ5HY92 759 aa15.55■□□□□ 0.08
TNFRSF1B-201ENST00000376259 PPP1R18Q6NYC8 613 aa15.55■□□□□ 0.08
TNFRSF1B-201ENST00000376259 RPUSD2Q8IZ73 545 aaKnown RBP15.55■□□□□ 0.08
TNFRSF1B-201ENST00000376259 TPCN2Q8NHX9 752 aa15.55■□□□□ 0.08
TNFRSF1B-201ENST00000376259 FBXO28Q9NVF7 368 aa15.55■□□□□ 0.08
TNFRSF1B-201ENST00000376259 LMNB1P20700 586 aa15.55■□□□□ 0.08
TNFRSF1B-201ENST00000376259 PPP4CP60510 307 aa15.55■□□□□ 0.08
TNFRSF1B-201ENST00000376259 NUGGCQ68CJ6 796 aa15.55■□□□□ 0.08
TNFRSF1B-201ENST00000376259 USP20Q9Y2K6 914 aa15.55■□□□□ 0.08
TNFRSF1B-201ENST00000376259 ECE1P42892 770 aa15.54■□□□□ 0.08
TNFRSF1B-201ENST00000376259 USP11P51784 963 aa15.54■□□□□ 0.08
TNFRSF1B-201ENST00000376259 MEI1Q5TIA1 1274 aa15.54■□□□□ 0.08
TNFRSF1B-201ENST00000376259 CCDC197Q8NCU1 140 aa15.54■□□□□ 0.08
TNFRSF1B-201ENST00000376259 SPIRE2Q8WWL2 714 aa15.54■□□□□ 0.08
TNFRSF1B-201ENST00000376259 C18orf8Q96DM3 657 aa15.54■□□□□ 0.08
TNFRSF1B-201ENST00000376259 PSMD1Q99460 953 aa15.54■□□□□ 0.08
TNFRSF1B-201ENST00000376259 KIFC3Q9BVG8 833 aa15.54■□□□□ 0.08
TNFRSF1B-201ENST00000376259 RIOX1Q9H6W3 641 aa15.54■□□□□ 0.08
TNFRSF1B-201ENST00000376259 TYW1Q9NV66 732 aaKnown RBP15.54■□□□□ 0.08
TNFRSF1B-201ENST00000376259 KLHL11Q9NVR0 708 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms