RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 ANKRD20A8PQ5CZ79 823 aa12.08□□□□□ -0.48
CCDC40-203ENST00000374877 ALKBH5Q6P6C2 394 aaKnown RBP12.08□□□□□ -0.48
CCDC40-203ENST00000374877 PARP9Q8IXQ6 854 aa12.08□□□□□ -0.48
CCDC40-203ENST00000374877 OGFOD1Q8N543 542 aa12.08□□□□□ -0.48
CCDC40-203ENST00000374877 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.08□□□□□ -0.48
CCDC40-203ENST00000374877 CELF4Q9BZC1 486 aaKnown RBP12.08□□□□□ -0.48
CCDC40-203ENST00000374877 DHX36Q9H2U1 1008 aaKnown RBP12.08□□□□□ -0.48
CCDC40-203ENST00000374877 DDX4Q9NQI0 724 aaKnown RBP12.08□□□□□ -0.48
CCDC40-203ENST00000374877 SWAP70Q9UH65 585 aa12.08□□□□□ -0.48
CCDC40-203ENST00000374877 E9PMD0 336 aa12.08□□□□□ -0.48
CCDC40-203ENST00000374877 SLC9A1P19634 815 aa12.08□□□□□ -0.48
CCDC40-203ENST00000374877 RBM5P52756 815 aaKnown RBP eCLIP12.08□□□□□ -0.48
CCDC40-203ENST00000374877 ORC2Q13416 577 aaPredicted RBP12.08□□□□□ -0.48
CCDC40-203ENST00000374877 TMEM119Q4V9L6 283 aa12.08□□□□□ -0.48
CCDC40-203ENST00000374877 GKAP1Q5VSY0 366 aaPredicted RBP12.08□□□□□ -0.48
CCDC40-203ENST00000374877 FUKQ8N0W3 1084 aa12.08□□□□□ -0.48
CCDC40-203ENST00000374877 ACTRT1Q8TDG2 376 aa12.08□□□□□ -0.48
CCDC40-203ENST00000374877 GANQ9H2C0 597 aa12.08□□□□□ -0.48
CCDC40-203ENST00000374877 SPDYE2BA6NHP3 402 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 SPDYE6P0CI01 402 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 CDK8P49336 464 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 GABPAQ06546 454 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 PDIA5Q14554 519 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 E2F5Q15329 346 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 UBE2SQ16763 222 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 CCDC65Q8IXS2 484 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 MDM1Q8TC05 714 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 CEP95Q96GE4 821 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 ODF2LQ9ULJ1 636 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.07□□□□□ -0.48
CCDC40-203ENST00000374877 CETN3O15182 167 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 HLA-DOAP06340 250 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 PREPLQ4J6C6 727 aaPredicted RBP12.07□□□□□ -0.48
CCDC40-203ENST00000374877 FKBP1CQ5VVH2 108 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 EIF1ADQ8N9N8 165 aaKnown RBP12.07□□□□□ -0.48
CCDC40-203ENST00000374877 N4BP2L2Q92802 583 aaPredicted RBP12.07□□□□□ -0.48
CCDC40-203ENST00000374877 EMILIN3Q9NT22 766 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 NAGPAQ9UK23 515 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 ATP8A1Q9Y2Q0 1164 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 CES2O00748 559 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 NR2F2P24468 414 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 SCTRP47872 440 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 EIF6P56537 245 aaKnown RBP12.07□□□□□ -0.48
CCDC40-203ENST00000374877 DCAF17Q5H9S7 520 aaPredicted RBP12.07□□□□□ -0.48
CCDC40-203ENST00000374877 AGBL2Q5U5Z8 902 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 DAAM2Q86T65 1068 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 GPBP1Q86WP2 473 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 CCDC26Q8TAB7 109 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 SGSM3Q96HU1 749 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 ZBED3Q96IU2 234 aaPredicted RBP12.07□□□□□ -0.48
CCDC40-203ENST00000374877 CALR3Q96L12 384 aaKnown RBP12.07□□□□□ -0.48
CCDC40-203ENST00000374877 KIAA1024Q9UPX6 916 aa12.07□□□□□ -0.48
CCDC40-203ENST00000374877 ATRNL1Q5VV63 1379 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 PLIN4Q96Q06 1357 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 ZNF280AP59817 542 aaPredicted RBP12.06□□□□□ -0.48
CCDC40-203ENST00000374877 PICALMQ13492 652 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 PRPF4BQ13523 1007 aaKnown RBP12.06□□□□□ -0.48
CCDC40-203ENST00000374877 DLGAP5Q15398 846 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 TCERG1LQ5VWI1 586 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 PAXIP1Q6ZW49 1069 aaPredicted RBP12.06□□□□□ -0.48
CCDC40-203ENST00000374877 TMC3Q7Z5M5 1100 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 LRRC57Q8N9N7 239 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 TPCN2Q8NHX9 752 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 SCFD1Q8WVM8 642 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 LRRC4CQ9HCJ2 640 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 GOPCQ9HD26 462 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 DDX25Q9UHL0 483 aaKnown RBP12.06□□□□□ -0.48
CCDC40-203ENST00000374877 UTP11Q9Y3A2 253 aaKnown RBP12.06□□□□□ -0.48
CCDC40-203ENST00000374877 MYH4Q9Y623 1939 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 CCDC188H7C350 402 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 EDIL3O43854 480 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 FLOT1O75955 427 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 UCHL3P15374 230 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 ELF1P32519 619 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 IRF2BP2Q7Z5L9 587 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 ADAT2Q7Z6V5 191 aaKnown RBP12.06□□□□□ -0.48
CCDC40-203ENST00000374877 C3orf20Q8ND61 904 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 TRIM51Q9BSJ1 452 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 TMOD2Q9NZR1 351 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 FAM198AQ9UFP1 575 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 PCDHA12Q9UN75 941 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 ESYT2A0FGR8 921 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 OPLAHO14841 1288 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 C10orf76Q5T2E6 689 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 TATDN2Q93075 761 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 HVCN1Q96D96 273 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 SYT17Q9BSW7 474 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 GPCPD1Q9NPB8 672 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 MCM8Q9UJA3 840 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 TPX2Q9ULW0 747 aaKnown RBP12.06□□□□□ -0.48
CCDC40-203ENST00000374877 SUFUQ9UMX1 484 aa12.06□□□□□ -0.48
CCDC40-203ENST00000374877 SMIM23A6NLE4 172 aa12.05□□□□□ -0.48
CCDC40-203ENST00000374877 CTNND1O60716 968 aaKnown RBP12.05□□□□□ -0.48
CCDC40-203ENST00000374877 PLA2G4BP0C869 781 aa12.05□□□□□ -0.48
CCDC40-203ENST00000374877 PRELPP51888 382 aa12.05□□□□□ -0.48
CCDC40-203ENST00000374877 NFIAQ12857 509 aa12.05□□□□□ -0.48
CCDC40-203ENST00000374877 SEPT2Q15019 361 aa12.05□□□□□ -0.48
CCDC40-203ENST00000374877 EXOC3L4Q17RC7 722 aa12.05□□□□□ -0.48
CCDC40-203ENST00000374877 FOXR2Q6PJQ5 311 aa12.05□□□□□ -0.48
CCDC40-203ENST00000374877 LRRC47Q8N1G4 583 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms