RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 SUPT3HO75486 399 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 ACTN2P35609 894 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 ASMTP46597 345 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 SLC8A3P57103 927 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 FAM26DQ5JW98 314 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 C6orf132Q5T0Z8 1188 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 CDKL2Q92772 493 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 FSD1Q9BTV5 496 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 ZBTB40Q9NUA8 1239 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 DSEQ9UL01 958 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 PEAK1Q9H792 1746 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 STRNO43815 780 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 SULT1E1P49888 294 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 EPHB1P54762 984 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 RALGDSQ12967 914 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 TAF12Q16514 161 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 BRWD3Q6RI45 1802 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 HID1Q8IV36 788 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 SPARTQ8N0X7 666 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 ZNF565Q8N9K5 539 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 SLC7A3Q8WY07 619 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 SCPEP1Q9HB40 452 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 PREBQ9HCU5 417 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 PLCB1Q9NQ66 1216 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 ZRANB1Q9UGI0 708 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 TSR3Q9UJK0 312 aaKnown RBP8.6□□□□□ -1.03
USP48-203ENST00000374732 HPCAL4Q9UM19 191 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 TNNQ9UQP3 1299 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 TRAF3IP3Q9Y228 551 aa8.6□□□□□ -1.03
USP48-203ENST00000374732 ARHGAP33O14559 1287 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 ACTN4O43707 911 aaKnown RBP8.59□□□□□ -1.03
USP48-203ENST00000374732 PLOD3O60568 738 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 USO1O60763 962 aaKnown RBP8.59□□□□□ -1.03
USP48-203ENST00000374732 OR5F1O95221 314 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 ATP5JP18859 108 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 RFC5P40937 340 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 IL1RL1Q01638 556 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 ITGB3BPQ13352 177 aaPredicted RBP8.59□□□□□ -1.03
USP48-203ENST00000374732 ZNF362Q5T0B9 420 aaPredicted RBP8.59□□□□□ -1.03
USP48-203ENST00000374732 CAND1Q86VP6 1230 aaKnown RBP8.59□□□□□ -1.03
USP48-203ENST00000374732 ARHGAP18Q8N392 663 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 RNF139Q8WU17 664 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 NCLNQ969V3 563 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 SDCCAG3Q96C92 435 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 SAMD11Q96NU1 681 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 C19orf43Q9BQ61 176 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 UPF3BQ9BZI7 483 aaKnown RBP8.59□□□□□ -1.03
USP48-203ENST00000374732 API5Q9BZZ5 524 aaKnown RBP8.59□□□□□ -1.03
USP48-203ENST00000374732 ATP13A3Q9H7F0 1226 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 PCDH10Q9P2E7 1040 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 NFKBIL1Q9UBC1 381 aaPredicted RBP8.59□□□□□ -1.03
USP48-203ENST00000374732 AGTPBP1Q9UPW5 1226 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 TMEM5Q9Y2B1 443 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 PCDHGB5Q9Y5G0 923 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 LOC102724428A0A0B4J2F2 783 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 PLOD2O00469 737 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 SPTLC1O15269 473 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 DNTTP04053 509 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 HMOX1P09601 288 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 ACTN1P12814 892 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 IDO1P14902 403 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 FBLN1P23142 703 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 HMGB2P26583 209 aaKnown RBP8.59□□□□□ -1.03
USP48-203ENST00000374732 SIK1P57059 783 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 DDR1Q08345 913 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 CCDC40Q4G0X9 1142 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 IFFO2Q5TF58 517 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 SLC9B2Q86UD5 537 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 MRPL50Q8N5N7 158 aaKnown RBP8.59□□□□□ -1.03
USP48-203ENST00000374732 RNF34Q969K3 372 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 EIF2AQ9BY44 585 aaKnown RBP8.59□□□□□ -1.03
USP48-203ENST00000374732 IL20Q9NYY1 176 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 GTF2IRD1Q9UHL9 959 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 TELO2Q9Y4R8 837 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 NUP188Q5SRE5 1749 aa8.59□□□□□ -1.03
USP48-203ENST00000374732 K7ENM7 598 aa8.59□□□□□ -1.04
USP48-203ENST00000374732 YKT6O15498 198 aa8.59□□□□□ -1.04
USP48-203ENST00000374732 POU2F1P14859 743 aa8.59□□□□□ -1.04
USP48-203ENST00000374732 MAN2A2P49641 1150 aa8.59□□□□□ -1.04
USP48-203ENST00000374732 AP3M2P53677 418 aa8.59□□□□□ -1.04
USP48-203ENST00000374732 FKBP5Q13451 457 aaPredicted RBP8.59□□□□□ -1.04
USP48-203ENST00000374732 GNL2Q13823 731 aaKnown RBP8.59□□□□□ -1.04
USP48-203ENST00000374732 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.59□□□□□ -1.04
USP48-203ENST00000374732 NUDT16L1Q9BRJ7 211 aaKnown RBP8.59□□□□□ -1.04
USP48-203ENST00000374732 LLPHQ9BRT6 129 aaKnown RBP8.59□□□□□ -1.04
USP48-203ENST00000374732 ZNF700Q9H0M5 742 aa8.59□□□□□ -1.04
USP48-203ENST00000374732 MTRRQ9UBK8 725 aa8.59□□□□□ -1.04
USP48-203ENST00000374732 DDX25Q9UHL0 483 aaKnown RBP8.59□□□□□ -1.04
USP48-203ENST00000374732 SATB2Q9UPW6 733 aa8.59□□□□□ -1.04
USP48-203ENST00000374732 MRPL11Q9Y3B7 192 aaKnown RBP8.59□□□□□ -1.04
USP48-203ENST00000374732 CAMTA1Q9Y6Y1 1673 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 POP4O95707 220 aaKnown RBP8.58□□□□□ -1.04
USP48-203ENST00000374732 ATP6V1B1P15313 513 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 SOX11P35716 441 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 KPNA1P52294 538 aaPredicted RBP8.58□□□□□ -1.04
USP48-203ENST00000374732 NR5A1Q13285 461 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 NFE2L1Q14494 772 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 KRT32Q14532 448 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 RRS1Q15050 365 aaKnown RBP8.58□□□□□ -1.04
USP48-203ENST00000374732 LRSAM1Q6UWE0 723 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms