RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 SEPT3Q9UH03 358 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 BCS1LQ9Y276 419 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 QSER1Q2KHR3 1735 aa7.03□□□□□ -1.28
CHD6-202ENST00000373222 MYH11P35749 1972 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 OPLAHO14841 1288 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 AKR1B10O60218 316 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 HSPA1LP34931 641 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 CYLC1P35663 651 aaPredicted RBP7.02□□□□□ -1.29
CHD6-202ENST00000373222 TNNT3P45378 269 aaPredicted RBP7.02□□□□□ -1.29
CHD6-202ENST00000373222 VAV2P52735 878 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 USP14P54578 494 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 POLR2FP61218 127 aaKnown RBP7.02□□□□□ -1.29
CHD6-202ENST00000373222 PPARDQ03181 441 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 MAN2A1Q16706 1144 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 TDRD12Q587J7 1177 aaKnown RBP7.02□□□□□ -1.29
CHD6-202ENST00000373222 PLEKHG4Q58EX7 1191 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 HERC4Q5GLZ8 1057 aaPredicted RBP7.02□□□□□ -1.29
CHD6-202ENST00000373222 KIAA1755Q5JYT7 1200 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 FAM26FQ5R3K3 315 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 LCE2AQ5TA79 106 aaPredicted RBP7.02□□□□□ -1.29
CHD6-202ENST00000373222 PADI6Q6TGC4 694 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 CREG2Q8IUH2 290 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 KSR1Q8IVT5 923 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 CAGE1Q8TC20 777 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 GTF3C2Q8WUA4 911 aaPredicted RBP7.02□□□□□ -1.29
CHD6-202ENST00000373222 SCFD1Q8WVM8 642 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 SECISBP2LQ93073 1101 aaKnown RBP7.02□□□□□ -1.29
CHD6-202ENST00000373222 PURBQ96QR8 312 aaKnown RBP7.02□□□□□ -1.29
CHD6-202ENST00000373222 LRRC1Q9BTT6 524 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 COA1Q9GZY4 146 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 DEF6Q9H4E7 631 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 SH2D4AQ9H788 454 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 ZNHIT6Q9NWK9 470 aaKnown RBP7.02□□□□□ -1.29
CHD6-202ENST00000373222 MYO1AQ9UBC5 1043 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 PCDHA2Q9Y5H9 948 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 ZNF646O15015 1829 aaPredicted RBP7.02□□□□□ -1.29
CHD6-202ENST00000373222 A0A1W2PRG0 241 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 KLRG2A4D1S0 409 aaPredicted RBP7.02□□□□□ -1.29
CHD6-202ENST00000373222 SORBS3O60504 671 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 MMP10P09238 476 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 VIL1P09327 827 aaKnown RBP7.02□□□□□ -1.29
CHD6-202ENST00000373222 PLA2G4BP0C869 781 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 CYP11B2P19099 503 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 CHRNA5P30532 468 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 HOXD13P35453 343 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 ECE1P42892 770 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 KRT83P78385 493 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 SPIRE1Q08AE8 756 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 KIF5AQ12840 1032 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 TRADDQ15628 312 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 CCDC40Q4G0X9 1142 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 RINLQ6ZS11 566 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 HDXQ7Z353 690 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 CCDC84Q86UT8 332 aaPredicted RBP7.02□□□□□ -1.29
CHD6-202ENST00000373222 CATSPER3Q86XQ3 398 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 MYOCDQ8IZQ8 938 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 HNRNPLLQ8WVV9 542 aaKnown RBP7.02□□□□□ -1.29
CHD6-202ENST00000373222 TEKT1Q969V4 418 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 CCDC47Q96A33 483 aaKnown RBP7.02□□□□□ -1.29
CHD6-202ENST00000373222 ANO3Q9BYT9 981 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 TDRD3Q9H7E2 651 aaKnown RBP7.02□□□□□ -1.29
CHD6-202ENST00000373222 MAGEF1Q9HAY2 307 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 RGL1Q9NZL6 768 aa7.02□□□□□ -1.29
CHD6-202ENST00000373222 AJAP1Q9UKB5 411 aaPredicted RBP7.02□□□□□ -1.29
CHD6-202ENST00000373222 PVALEFA0A1B0GWK0 134 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 ESYT3A0FGR9 886 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 ANKRD65E5RJM6 399 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 PRPF6O94906 941 aaKnown RBP7.01□□□□□ -1.29
CHD6-202ENST00000373222 SYF2O95926 243 aaKnown RBP7.01□□□□□ -1.29
CHD6-202ENST00000373222 FTCDO95954 541 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 LDHAP00338 332 aaKnown RBP7.01□□□□□ -1.29
CHD6-202ENST00000373222 MYBP10242 640 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 SMARCA1P28370 1054 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 CASP4P49662 377 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 IKQ13123 557 aaPredicted RBP7.01□□□□□ -1.29
CHD6-202ENST00000373222 SERINC3Q13530 473 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 NCOA4Q13772 614 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 PDIA5Q14554 519 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 SLFN13Q68D06 897 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 PPP4R3AQ6IN85 833 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 GJB7Q6PEY0 223 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 CACNA2D4Q7Z3S7 1137 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 FAM114A1Q8IWE2 563 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 SLF2Q8IX21 1173 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 CACTIN-AS1Q8N1I8 211 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 FAM133AQ8N9E0 248 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 NOC3LQ8WTT2 800 aaKnown RBP7.01□□□□□ -1.29
CHD6-202ENST00000373222 LENG9Q96B70 501 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 MPHOSPH6Q99547 160 aaKnown RBP7.01□□□□□ -1.29
CHD6-202ENST00000373222 LSM14BQ9BX40 385 aaKnown RBP7.01□□□□□ -1.29
CHD6-202ENST00000373222 PRKD2Q9BZL6 878 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 RABEP2Q9H5N1 569 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 GEMIN8Q9NWZ8 242 aaKnown RBP7.01□□□□□ -1.29
CHD6-202ENST00000373222 LCMT1Q9UIC8 334 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 DNAH12Q6ZR08 3092 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 A0A087X0T9 212 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 A0A1W2PQJ5 194 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 F5H6K3 240 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 EML1O00423 815 aa7.01□□□□□ -1.29
CHD6-202ENST00000373222 ATP8B1O43520 1251 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms