RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 NEUROG2Q9H2A3 272 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 POLD4Q9HCU8 107 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 KCNQ5Q9NR82 932 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 RGL1Q9NZL6 768 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 COL11A2P13942 1736 aaPredicted RBP13.9□□□□□ -0.18
CTPS1-202ENST00000372621 SCN9AQ15858 1988 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 CCDC188H7C350 402 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 PIK3CDO00329 1044 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 ONECUT3O60422 494 aaPredicted RBP13.9□□□□□ -0.18
CTPS1-202ENST00000372621 GFPT2O94808 682 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 FERP16591 822 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 TAL1P17542 331 aaPredicted RBP13.9□□□□□ -0.18
CTPS1-202ENST00000372621 GAP43P17677 238 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 SYDE2Q5VT97 1194 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 BTNL9Q6UXG8 535 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 LMBR1Q8WVP7 490 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 EPN3Q9H201 632 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 TBCAO75347 108 aaKnown RBP13.9□□□□□ -0.18
CTPS1-202ENST00000372621 GUCY1A3Q02108 690 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 SLC27A3Q5K4L6 730 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 C1orf186Q6ZWK4 172 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 PEX26Q7Z412 305 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 VPS36Q86VN1 386 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 FIZ1Q96SL8 496 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 IKZF4Q9H2S9 585 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 SAMM50Q9Y512 469 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 PCDHB13Q9Y5F0 798 aa13.9□□□□□ -0.18
CTPS1-202ENST00000372621 NPM3O75607 178 aaKnown RBP13.89□□□□□ -0.19
CTPS1-202ENST00000372621 PTPROQ16827 1216 aa13.89□□□□□ -0.19
CTPS1-202ENST00000372621 DDX42Q86XP3 938 aaKnown RBP eCLIP13.89□□□□□ -0.19
CTPS1-202ENST00000372621 SYCE1Q8N0S2 351 aa13.89□□□□□ -0.19
CTPS1-202ENST00000372621 GPR88Q9GZN0 384 aa13.89□□□□□ -0.19
CTPS1-202ENST00000372621 DDX47Q9H0S4 455 aaKnown RBP13.89□□□□□ -0.19
CTPS1-202ENST00000372621 TTC7AQ9ULT0 858 aaPredicted RBP13.89□□□□□ -0.19
CTPS1-202ENST00000372621 SLX4Q8IY92 1834 aa13.89□□□□□ -0.19
CTPS1-202ENST00000372621 NCANO14594 1321 aa13.89□□□□□ -0.19
CTPS1-202ENST00000372621 F8VZ95 297 aa13.89□□□□□ -0.19
CTPS1-202ENST00000372621 NDUFAB1O14561 156 aa13.89□□□□□ -0.19
CTPS1-202ENST00000372621 EVI5O60447 810 aa13.89□□□□□ -0.19
CTPS1-202ENST00000372621 PPP1R37O75864 691 aa13.89□□□□□ -0.19
CTPS1-202ENST00000372621 SLITRK3O94933 977 aa13.89□□□□□ -0.19
CTPS1-202ENST00000372621 ITGA4P13612 1032 aa13.89□□□□□ -0.19
CTPS1-202ENST00000372621 HOXA13P31271 388 aaPredicted RBP13.89□□□□□ -0.19
CTPS1-202ENST00000372621 STAT1P42224 750 aa13.89□□□□□ -0.19
CTPS1-202ENST00000372621 POU5F1Q01860 360 aaKnown RBP13.89□□□□□ -0.19
CTPS1-202ENST00000372621 CEP85LQ5SZL2 805 aa13.89□□□□□ -0.19
CTPS1-202ENST00000372621 OTOP1Q7RTM1 612 aa13.89□□□□□ -0.19
CTPS1-202ENST00000372621 SLITRK6Q9H5Y7 841 aa13.89□□□□□ -0.19
CTPS1-202ENST00000372621 SRRM3A6NNA2 597 aaPredicted RBP13.88□□□□□ -0.19
CTPS1-202ENST00000372621 SFI1A8K8P3 1242 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 VGLL3A8MV65 326 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 KRIT1O00522 736 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 PSMC2P35998 433 aaKnown RBP13.88□□□□□ -0.19
CTPS1-202ENST00000372621 MDH1P40925 334 aaKnown RBP13.88□□□□□ -0.19
CTPS1-202ENST00000372621 GALCP54803 685 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 JAG1P78504 1218 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 HLTFQ14527 1009 aaKnown RBP eCLIP13.88□□□□□ -0.19
CTPS1-202ENST00000372621 PTGISQ16647 500 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 MKNK1Q9BUB5 465 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 TUFT1Q9NNX1 390 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 FRMPD4Q14CM0 1322 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 NPR1P16066 1061 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 NMT1P30419 496 aaKnown RBP13.88□□□□□ -0.19
CTPS1-202ENST00000372621 SOX5P35711 763 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 DAAM2Q86T65 1068 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 FAM186BQ8IYM0 893 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 PIGOQ8TEQ8 1089 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 U2AF1L4Q8WU68 220 aaKnown RBP13.88□□□□□ -0.19
CTPS1-202ENST00000372621 LRRC45Q96CN5 670 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 WDR18Q9BV38 432 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 STK33Q9BYT3 514 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 MYH11P35749 1972 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 TMCO5BA8MYB1 307 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 GDF11O95390 407 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 FLT3P36888 993 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 FMO5P49326 533 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 PPATQ06203 517 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 ZNF844Q08AG5 666 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 CTTNQ14247 550 aaKnown RBP13.88□□□□□ -0.19
CTPS1-202ENST00000372621 ZC2HC1CQ53FD0 456 aaPredicted RBP13.88□□□□□ -0.19
CTPS1-202ENST00000372621 B4GALNT4Q76KP1 1039 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 MAATS1Q7Z4T9 603 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 PODNQ7Z5L7 613 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 PROCA1Q8NCQ7 364 aaPredicted RBP13.88□□□□□ -0.19
CTPS1-202ENST00000372621 DMAC2Q9NW81 257 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 AMACRQ9UHK6 382 aa13.88□□□□□ -0.19
CTPS1-202ENST00000372621 PSMD10O75832 226 aa13.87□□□□□ -0.19
CTPS1-202ENST00000372621 BMP3P12645 472 aa13.87□□□□□ -0.19
CTPS1-202ENST00000372621 FKBP1AP62942 108 aaKnown RBP13.87□□□□□ -0.19
CTPS1-202ENST00000372621 HDLBPQ00341 1268 aaKnown RBP13.87□□□□□ -0.19
CTPS1-202ENST00000372621 ABCB5Q2M3G0 1257 aa13.87□□□□□ -0.19
CTPS1-202ENST00000372621 NAA35Q5VZE5 725 aa13.87□□□□□ -0.19
CTPS1-202ENST00000372621 OSGEPQ9NPF4 335 aa13.87□□□□□ -0.19
CTPS1-202ENST00000372621 DDX3YO15523 660 aaKnown RBP13.87□□□□□ -0.19
CTPS1-202ENST00000372621 TMEM253P0C7T8 217 aa13.87□□□□□ -0.19
CTPS1-202ENST00000372621 ZNF131P52739 623 aa13.87□□□□□ -0.19
CTPS1-202ENST00000372621 PPP2R5CQ13362 524 aa13.87□□□□□ -0.19
CTPS1-202ENST00000372621 COG2Q14746 738 aa13.87□□□□□ -0.19
CTPS1-202ENST00000372621 SPATS2Q86XZ4 545 aaKnown RBP13.87□□□□□ -0.19
CTPS1-202ENST00000372621 KIAA0825Q8IV33 1275 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms