RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 SEMA4AQ9H3S1 761 aa12.65□□□□□ -0.39
PTPN1-201ENST00000371621 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.65□□□□□ -0.39
PTPN1-201ENST00000371621 CFLARO15519 480 aa12.64□□□□□ -0.39
PTPN1-201ENST00000371621 PGM3O95394 542 aa12.64□□□□□ -0.39
PTPN1-201ENST00000371621 TRIP10Q15642 601 aa12.64□□□□□ -0.39
PTPN1-201ENST00000371621 IYDQ6PHW0 289 aa12.64□□□□□ -0.39
PTPN1-201ENST00000371621 SLC25A41Q8N5S1 370 aa12.64□□□□□ -0.39
PTPN1-201ENST00000371621 LPIN2Q92539 896 aa12.64□□□□□ -0.39
PTPN1-201ENST00000371621 GJA10Q969M2 543 aa12.64□□□□□ -0.39
PTPN1-201ENST00000371621 FNBP1Q96RU3 617 aa12.64□□□□□ -0.39
PTPN1-201ENST00000371621 ARHGAP20Q9P2F6 1191 aa12.64□□□□□ -0.39
PTPN1-201ENST00000371621 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.64□□□□□ -0.39
PTPN1-201ENST00000371621 ENO1P06733 434 aaKnown RBP12.64□□□□□ -0.39
PTPN1-201ENST00000371621 ACADSP16219 412 aa12.64□□□□□ -0.39
PTPN1-201ENST00000371621 ACAP1Q15027 740 aa12.64□□□□□ -0.39
PTPN1-201ENST00000371621 MB21D2Q8IYB1 491 aaPredicted RBP12.64□□□□□ -0.39
PTPN1-201ENST00000371621 BLIDQ8IZY5 108 aa12.64□□□□□ -0.39
PTPN1-201ENST00000371621 TRIM55Q9BYV6 548 aa12.64□□□□□ -0.39
PTPN1-201ENST00000371621 DISC1Q9NRI5 854 aa12.64□□□□□ -0.39
PTPN1-201ENST00000371621 SH3TC1Q8TE82 1336 aa12.64□□□□□ -0.39
PTPN1-201ENST00000371621 FAM196BA6NMK8 535 aa12.64□□□□□ -0.39
PTPN1-201ENST00000371621 TMEM259Q4ZIN3 620 aa12.64□□□□□ -0.39
PTPN1-201ENST00000371621 ZNF579Q8NAF0 562 aaKnown RBP12.64□□□□□ -0.39
PTPN1-201ENST00000371621 ZBBXA8MT70 800 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 KDM1AO60341 852 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 PLEKHA8P1O95397 391 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 CALM1P0DP23 149 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 CALM2P0DP24 149 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 CALM3P0DP25 149 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 TPD52P55327 224 aaPredicted RBP12.63□□□□□ -0.39
PTPN1-201ENST00000371621 NCALDP61601 193 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 FKBP3Q00688 224 aaKnown RBP12.63□□□□□ -0.39
PTPN1-201ENST00000371621 STK4Q13043 487 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 MPP3Q13368 585 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 ZBTB46Q86UZ6 589 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 UCMAQ8WVF2 138 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 ANKS1AQ92625 1134 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 PPWD1Q96BP3 646 aaKnown RBP12.63□□□□□ -0.39
PTPN1-201ENST00000371621 THEGQ9P2T0 379 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 CHORDC1Q9UHD1 332 aaPredicted RBP12.63□□□□□ -0.39
PTPN1-201ENST00000371621 ZNF180Q9UJW8 692 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 TTC7AQ9ULT0 858 aaPredicted RBP12.63□□□□□ -0.39
PTPN1-201ENST00000371621 ZNF148Q9UQR1 794 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 MROH1Q8NDA8 1641 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 GRID2IPA4D2P6 1211 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 XPO1O14980 1071 aaKnown RBP12.63□□□□□ -0.39
PTPN1-201ENST00000371621 STK10O94804 968 aaKnown RBP12.63□□□□□ -0.39
PTPN1-201ENST00000371621 SP100P23497 879 aaPredicted RBP12.63□□□□□ -0.39
PTPN1-201ENST00000371621 LONP1P36776 959 aaKnown RBP12.63□□□□□ -0.39
PTPN1-201ENST00000371621 GALK1P51570 392 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 ESRRGP62508 458 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 CDKAL1Q5VV42 579 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 ZNF790Q6PG37 636 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 RIBC1Q8N443 379 aaPredicted RBP12.63□□□□□ -0.39
PTPN1-201ENST00000371621 SHCBP1LQ9BZQ2 653 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 SEC31BQ9NQW1 1179 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 ADAM22Q9P0K1 906 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 BTBD7Q9P203 1132 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 DOLKQ9UPQ8 538 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 HPS5Q9UPZ3 1129 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 ZNF609O15014 1411 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 MAGEB6P1A0A0J9YX57 407 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 KRT10P13645 584 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 PDE6AP16499 860 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 PHBP35232 272 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 ARFIP2P53365 341 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 KPNB1Q14974 876 aaKnown RBP12.63□□□□□ -0.39
PTPN1-201ENST00000371621 KIAA1755Q5JYT7 1200 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 PALM2Q8IXS6 379 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 TTC16Q8NEE8 873 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 THAP11Q96EK4 314 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 ZNF496Q96IT1 587 aaPredicted RBP12.63□□□□□ -0.39
PTPN1-201ENST00000371621 KLF6Q99612 283 aaPredicted RBP12.63□□□□□ -0.39
PTPN1-201ENST00000371621 C6orf50Q9HD87 102 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 LAMC1P11047 1609 aa12.63□□□□□ -0.39
PTPN1-201ENST00000371621 ARHGAP10A1A4S6 786 aa12.62□□□□□ -0.39
PTPN1-201ENST00000371621 B2RBV5 119 aa12.62□□□□□ -0.39
PTPN1-201ENST00000371621 H3BRJ5 948 aa12.62□□□□□ -0.39
PTPN1-201ENST00000371621 GOLGA8HP0CJ92 632 aa12.62□□□□□ -0.39
PTPN1-201ENST00000371621 ATF7P17544 494 aaPredicted RBP12.62□□□□□ -0.39
PTPN1-201ENST00000371621 NR2F2P24468 414 aa12.62□□□□□ -0.39
PTPN1-201ENST00000371621 ASPHQ12797 758 aa12.62□□□□□ -0.39
PTPN1-201ENST00000371621 TCIRG1Q13488 830 aa12.62□□□□□ -0.39
PTPN1-201ENST00000371621 R3HDM1Q15032 1099 aaKnown RBP12.62□□□□□ -0.39
PTPN1-201ENST00000371621 FAM26FQ5R3K3 315 aa12.62□□□□□ -0.39
PTPN1-201ENST00000371621 CCDC137Q6PK04 289 aaKnown RBP12.62□□□□□ -0.39
PTPN1-201ENST00000371621 METTL13Q8N6R0 699 aa12.62□□□□□ -0.39
PTPN1-201ENST00000371621 USP6NLQ92738 828 aa12.62□□□□□ -0.39
PTPN1-201ENST00000371621 MPHOSPH6Q99547 160 aaKnown RBP12.62□□□□□ -0.39
PTPN1-201ENST00000371621 DNAJC7Q99615 494 aa12.62□□□□□ -0.39
PTPN1-201ENST00000371621 DRC3Q9H069 523 aa12.62□□□□□ -0.39
PTPN1-201ENST00000371621 MARCOQ9UEW3 520 aaPredicted RBP12.62□□□□□ -0.39
PTPN1-201ENST00000371621 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.62□□□□□ -0.39
PTPN1-201ENST00000371621 IQGAP1P46940 1657 aa12.62□□□□□ -0.39
PTPN1-201ENST00000371621 A0A087X0T9 212 aa12.62□□□□□ -0.39
PTPN1-201ENST00000371621 SNX3O60493 162 aa12.62□□□□□ -0.39
PTPN1-201ENST00000371621 FAM228BP0C875 321 aa12.62□□□□□ -0.39
PTPN1-201ENST00000371621 KLHDC7AQ5VTJ3 777 aa12.62□□□□□ -0.39
PTPN1-201ENST00000371621 SIX5Q8N196 739 aa12.62□□□□□ -0.39
PTPN1-201ENST00000371621 ICA1LQ8NDH6 482 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms