RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 RPTORQ8N122 1335 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 PALM3A6NDB9 673 aaPredicted RBP10.48□□□□□ -0.73
LRRC40-201ENST00000370952 E9PMD0 336 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 FLOT1O75955 427 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 CCND1P24385 295 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 PSMD2Q13200 908 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 MKRN4PQ13434 485 aaPredicted RBP10.48□□□□□ -0.73
LRRC40-201ENST00000370952 CAVIN4Q5BKX8 364 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 HERC4Q5GLZ8 1057 aaPredicted RBP10.48□□□□□ -0.73
LRRC40-201ENST00000370952 DCAF17Q5H9S7 520 aaPredicted RBP10.48□□□□□ -0.73
LRRC40-201ENST00000370952 ZDHHC24Q6UX98 284 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 SLFN11Q7Z7L1 901 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 HES6Q96HZ4 224 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 ATP8A2Q9NTI2 1148 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 TFCP2L1Q9NZI6 479 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 ADAM22Q9P0K1 906 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 HDAC9Q9UKV0 1011 aa10.48□□□□□ -0.73
LRRC40-201ENST00000370952 IGSF9BQ9UPX0 1349 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 DDX3XO00571 662 aaKnown RBP eCLIP10.47□□□□□ -0.734e-9■■■□□ 16.1
LRRC40-201ENST00000370952 LINGO3P0C6S8 592 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 NR2F2P24468 414 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 GNA11P29992 359 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 MSH2P43246 934 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 GALCP54803 685 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 PTENP60484 403 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 COPS2P61201 443 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 MAP2K1Q02750 393 aaPredicted RBP10.47□□□□□ -0.73
LRRC40-201ENST00000370952 TAF11Q15544 211 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 CNGA2Q16280 664 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 C10orf76Q5T2E6 689 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 TCERG1LQ5VWI1 586 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 AP1ARQ63HQ0 302 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 NUGGCQ68CJ6 796 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 JAMLQ86YT9 394 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 SLC17A8Q8NDX2 589 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 SCFD1Q8WVM8 642 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 CEP63Q96MT8 703 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 TMOD4Q9NZQ9 345 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 USP15Q9Y4E8 981 aaPredicted RBP10.47□□□□□ -0.73
LRRC40-201ENST00000370952 KIAA1551Q9HCM1 1747 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 GFPT2O94808 682 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 BRD2P25440 801 aaKnown RBP10.47□□□□□ -0.73
LRRC40-201ENST00000370952 KIAA1755Q5JYT7 1200 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 DPY19L2P1Q6NXN4 242 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 CCDC25Q86WR0 208 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 CEP120Q8N960 986 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 ANKRD42Q8N9B4 389 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 COA7Q96BR5 231 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 C18orf8Q96DM3 657 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 ATAD5Q96QE3 1844 aa10.47□□□□□ -0.73
LRRC40-201ENST00000370952 ERVV-1B6SEH8 477 aa10.46□□□□□ -0.73
LRRC40-201ENST00000370952 KIAA0391O15091 583 aaKnown RBP10.46□□□□□ -0.73
LRRC40-201ENST00000370952 EDIL3O43854 480 aa10.46□□□□□ -0.73
LRRC40-201ENST00000370952 AGTP01019 485 aa10.46□□□□□ -0.73
LRRC40-201ENST00000370952 ATP2A2P16615 1042 aaKnown RBP10.46□□□□□ -0.73
LRRC40-201ENST00000370952 PON1P27169 355 aa10.46□□□□□ -0.73
LRRC40-201ENST00000370952 FXR2P51116 673 aaKnown RBP eCLIP10.46□□□□□ -0.73
LRRC40-201ENST00000370952 PDE6CP51160 858 aa10.46□□□□□ -0.73
LRRC40-201ENST00000370952 BLMHQ13867 455 aa10.46□□□□□ -0.73
LRRC40-201ENST00000370952 EXOC3L4Q17RC7 722 aa10.46□□□□□ -0.73
LRRC40-201ENST00000370952 BARGINQ6ZT62 677 aa10.46□□□□□ -0.73
LRRC40-201ENST00000370952 FITM2Q8N6M3 262 aa10.46□□□□□ -0.73
LRRC40-201ENST00000370952 GDAP1Q8TB36 358 aa10.46□□□□□ -0.73
LRRC40-201ENST00000370952 CNKSR1Q969H4 720 aa10.46□□□□□ -0.73
LRRC40-201ENST00000370952 SH3GL3Q99963 347 aa10.46□□□□□ -0.73
LRRC40-201ENST00000370952 EMILIN3Q9NT22 766 aa10.46□□□□□ -0.73
LRRC40-201ENST00000370952 CETN3O15182 167 aa10.46□□□□□ -0.74
LRRC40-201ENST00000370952 DDX3YO15523 660 aaKnown RBP10.46□□□□□ -0.74
LRRC40-201ENST00000370952 GNA14O95837 355 aa10.46□□□□□ -0.74
LRRC40-201ENST00000370952 RPL21P46778 160 aaKnown RBP10.46□□□□□ -0.74
LRRC40-201ENST00000370952 TNNI2P48788 182 aa10.46□□□□□ -0.74
LRRC40-201ENST00000370952 CASP5P51878 434 aa10.46□□□□□ -0.74
LRRC40-201ENST00000370952 ADCY1Q08828 1119 aa10.46□□□□□ -0.74
LRRC40-201ENST00000370952 BNIP1Q12981 228 aa10.46□□□□□ -0.74
LRRC40-201ENST00000370952 SNX1Q13596 522 aa10.46□□□□□ -0.74
LRRC40-201ENST00000370952 AUHQ13825 339 aaKnown RBP10.46□□□□□ -0.74
LRRC40-201ENST00000370952 LONRF1Q17RB8 773 aa10.46□□□□□ -0.74
LRRC40-201ENST00000370952 GALNTL6Q49A17 601 aa10.46□□□□□ -0.74
LRRC40-201ENST00000370952 TMEM119Q4V9L6 283 aa10.46□□□□□ -0.74
LRRC40-201ENST00000370952 SBK1Q52WX2 424 aa10.46□□□□□ -0.74
LRRC40-201ENST00000370952 C6orf118Q5T5N4 469 aa10.46□□□□□ -0.74
LRRC40-201ENST00000370952 C3orf67Q6ZVT6 689 aa10.46□□□□□ -0.74
LRRC40-201ENST00000370952 EXOC3L1Q86VI1 746 aa10.46□□□□□ -0.74
LRRC40-201ENST00000370952 SYCE1Q8N0S2 351 aa10.46□□□□□ -0.74
LRRC40-201ENST00000370952 LNX1Q8TBB1 728 aaPredicted RBP10.46□□□□□ -0.74
LRRC40-201ENST00000370952 SLC35G2Q8TBE7 412 aa10.46□□□□□ -0.74
LRRC40-201ENST00000370952 RMDN2Q96LZ7 410 aa10.46□□□□□ -0.74
LRRC40-201ENST00000370952 OSBPL1AQ9BXW6 950 aa10.46□□□□□ -0.74
LRRC40-201ENST00000370952 KCTD10Q9H3F6 313 aa10.46□□□□□ -0.74
LRRC40-201ENST00000370952 CORO1CQ9ULV4 474 aaPredicted RBP10.46□□□□□ -0.74
LRRC40-201ENST00000370952 RASGRF2O14827 1237 aa10.45□□□□□ -0.74
LRRC40-201ENST00000370952 MARCH6O60337 910 aa10.45□□□□□ -0.74
LRRC40-201ENST00000370952 OAS1P00973 400 aaKnown RBP10.45□□□□□ -0.74
LRRC40-201ENST00000370952 PLCG2P16885 1265 aa10.45□□□□□ -0.74
LRRC40-201ENST00000370952 LACTBP83111 547 aaPredicted RBP10.45□□□□□ -0.74
LRRC40-201ENST00000370952 RNASELQ05823 741 aaKnown RBP10.45□□□□□ -0.74
LRRC40-201ENST00000370952 C12orf60Q5U649 245 aa10.45□□□□□ -0.74
LRRC40-201ENST00000370952 COL23A1Q86Y22 540 aaPredicted RBP10.45□□□□□ -0.74
LRRC40-201ENST00000370952 GLYCTKQ8IVS8 523 aa10.45□□□□□ -0.74
LRRC40-201ENST00000370952 ZNF444Q8N0Y2 327 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms