RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 ABI1Q8IZP0 508 aa13.29□□□□□ -0.28
PTPRK-203ENST00000368207 ADSSL1Q8N142 457 aa13.29□□□□□ -0.28
PTPRK-203ENST00000368207 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.29□□□□□ -0.282e-6■■■■□ 23.8
PTPRK-203ENST00000368207 SEL1LQ9UBV2 794 aa13.29□□□□□ -0.28
PTPRK-203ENST00000368207 KRT1P04264 644 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 CLCN6P51797 869 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 PASD1Q8IV76 773 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 HEXIM2Q96MH2 286 aaKnown RBP13.28□□□□□ -0.28
PTPRK-203ENST00000368207 WDR46O15213 610 aaKnown RBP13.28□□□□□ -0.28
PTPRK-203ENST00000368207 SRGNP10124 158 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 VAMP7P51809 220 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 GABPAQ06546 454 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 TRIP13Q15645 432 aaPredicted RBP13.28□□□□□ -0.28
PTPRK-203ENST00000368207 RSRC2Q7L4I2 434 aaKnown RBP13.28□□□□□ -0.28
PTPRK-203ENST00000368207 RHPN2Q8IUC4 686 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 ENGASEQ8NFI3 743 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 SPON1Q9HCB6 807 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 MAD1L1Q9Y6D9 718 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 CCDC151A5D8V7 595 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 LDHAP00338 332 aaKnown RBP13.28□□□□□ -0.28
PTPRK-203ENST00000368207 FDX1P10109 184 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 PSMC4P43686 418 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 TCP11Q8WWU5 503 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 HAUS1Q96CS2 278 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 FAM167AQ96KS9 214 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 TEX13BQ9BXU2 312 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 DEFB129Q9H1M3 183 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 MYOZ2Q9NPC6 264 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 ADGRB2O60241 1585 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 INPP5BP32019 993 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 DRAP1Q14919 205 aaPredicted RBP13.28□□□□□ -0.28
PTPRK-203ENST00000368207 ZNF568Q3ZCX4 644 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 ZNF667Q5HYK9 610 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 CYP4F22Q6NT55 531 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 FBXO38Q6PIJ6 1188 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 CCDC13Q8IYE1 715 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 ACER1Q8TDN7 264 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 P3H4Q92791 437 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 MTRQ99707 1265 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 POLR3FQ9H1D9 316 aaPredicted RBP13.28□□□□□ -0.28
PTPRK-203ENST00000368207 CD2APQ9Y5K6 639 aa13.28□□□□□ -0.28
PTPRK-203ENST00000368207 NWD1Q149M9 1564 aa13.27□□□□□ -0.28
PTPRK-203ENST00000368207 POC1B-GALNT4F8VUJ3 575 aa13.27□□□□□ -0.28
PTPRK-203ENST00000368207 MYO1EQ12965 1108 aa13.27□□□□□ -0.28
PTPRK-203ENST00000368207 LPAR1Q92633 364 aa13.27□□□□□ -0.28
PTPRK-203ENST00000368207 TBC1D31Q96DN5 1066 aa13.27□□□□□ -0.28
PTPRK-203ENST00000368207 PBKQ96KB5 322 aa13.27□□□□□ -0.28
PTPRK-203ENST00000368207 AGBL1Q96MI9 1066 aa13.27□□□□□ -0.28
PTPRK-203ENST00000368207 RTFDC1Q9BY42 306 aaPredicted RBP13.27□□□□□ -0.28
PTPRK-203ENST00000368207 IRX2Q9BZI1 471 aaPredicted RBP13.27□□□□□ -0.28
PTPRK-203ENST00000368207 HOMER3Q9NSC5 361 aa13.27□□□□□ -0.28
PTPRK-203ENST00000368207 EPHB4P54760 987 aa13.27□□□□□ -0.29
PTPRK-203ENST00000368207 ZNF280CQ8ND82 737 aa13.27□□□□□ -0.29
PTPRK-203ENST00000368207 MED4Q9NPJ6 270 aa13.27□□□□□ -0.29
PTPRK-203ENST00000368207 FGGP02679 453 aa13.27□□□□□ -0.29
PTPRK-203ENST00000368207 ZSCAN20P17040 1043 aaPredicted RBP13.27□□□□□ -0.29
PTPRK-203ENST00000368207 SARNPP82979 210 aaKnown RBP13.27□□□□□ -0.29
PTPRK-203ENST00000368207 TMEM270Q6UE05 265 aa13.27□□□□□ -0.29
PTPRK-203ENST00000368207 REEP2Q9BRK0 252 aa13.27□□□□□ -0.29
PTPRK-203ENST00000368207 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.27□□□□□ -0.29
PTPRK-203ENST00000368207 RNF14Q9UBS8 474 aa13.27□□□□□ -0.29
PTPRK-203ENST00000368207 SLC9A2Q9UBY0 812 aa13.27□□□□□ -0.29
PTPRK-203ENST00000368207 TCRBV5S4A2TA0A5A2 114 aa13.27□□□□□ -0.29
PTPRK-203ENST00000368207 GOLGA8KD6RF30 607 aa13.27□□□□□ -0.29
PTPRK-203ENST00000368207 ECE1P42892 770 aa13.27□□□□□ -0.29
PTPRK-203ENST00000368207 YWHAGP61981 247 aaKnown RBP eCLIP13.27□□□□□ -0.29
PTPRK-203ENST00000368207 ADCY1Q08828 1119 aa13.27□□□□□ -0.29
PTPRK-203ENST00000368207 SEC23AQ15436 765 aa13.27□□□□□ -0.29
PTPRK-203ENST00000368207 SURF1Q15526 300 aa13.27□□□□□ -0.29
PTPRK-203ENST00000368207 MAP7D1Q3KQU3 841 aa13.27□□□□□ -0.29
PTPRK-203ENST00000368207 GIMAP8Q8ND71 665 aaPredicted RBP13.27□□□□□ -0.29
PTPRK-203ENST00000368207 BCAS4Q8TDM0 211 aa13.27□□□□□ -0.29
PTPRK-203ENST00000368207 MAP3K14Q99558 947 aa13.27□□□□□ -0.29
PTPRK-203ENST00000368207 CHP1Q99653 195 aa13.27□□□□□ -0.29
PTPRK-203ENST00000368207 ADAM22Q9P0K1 906 aa13.27□□□□□ -0.29
PTPRK-203ENST00000368207 CNOT8Q9UFF9 292 aaKnown RBP13.27□□□□□ -0.29
PTPRK-203ENST00000368207 EMSYQ7Z589 1322 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 YWHABP31946 246 aaKnown RBP13.26□□□□□ -0.29
PTPRK-203ENST00000368207 DHX9Q08211 1270 aaKnown RBP13.26□□□□□ -0.29
PTPRK-203ENST00000368207 PTPAQ15257 358 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 ZSCAN26Q16670 478 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 LMBRD2Q68DH5 695 aaPredicted RBP13.26□□□□□ -0.29
PTPRK-203ENST00000368207 FAM71BQ8TC56 605 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 SPATA33Q96N06 139 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 JPH1Q9HDC5 661 aaPredicted RBP13.26□□□□□ -0.29
PTPRK-203ENST00000368207 FAM114A2Q9NRY5 505 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 ANAPC7Q9UJX3 599 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 MED7O43513 233 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 RHOBTB3O94955 611 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 ECEL1O95672 775 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 NR3C2P08235 984 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 ZNF131P52739 623 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 RNASELQ05823 741 aaKnown RBP13.26□□□□□ -0.29
PTPRK-203ENST00000368207 ITKQ08881 620 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 TTLL4Q14679 1199 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 MMP19Q99542 508 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 NCK2O43639 380 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 MYL3P08590 195 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 PHBP35232 272 aa13.26□□□□□ -0.29
PTPRK-203ENST00000368207 IFNAR2P48551 515 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms