RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 MX1P20591 662 aa16.87■□□□□ 0.29
VAMP4-202ENST00000367740 SDHBP21912 280 aa16.87■□□□□ 0.29
VAMP4-202ENST00000367740 SPECC1Q5M775 1068 aa16.87■□□□□ 0.29
VAMP4-202ENST00000367740 TMC5Q6UXY8 1006 aa16.87■□□□□ 0.29
VAMP4-202ENST00000367740 CCDC149Q6ZUS6 474 aa16.87■□□□□ 0.29
VAMP4-202ENST00000367740 OTOP3Q7RTS5 596 aa16.87■□□□□ 0.29
VAMP4-202ENST00000367740 LRRC43Q8N309 656 aa16.87■□□□□ 0.29
VAMP4-202ENST00000367740 PIGSQ96S52 555 aa16.87■□□□□ 0.29
VAMP4-202ENST00000367740 TBC1D17Q9HA65 648 aa16.87■□□□□ 0.29
VAMP4-202ENST00000367740 CDHR5Q9HBB8 845 aa16.87■□□□□ 0.29
VAMP4-202ENST00000367740 WNT16Q9UBV4 365 aa16.87■□□□□ 0.29
VAMP4-202ENST00000367740 MIA3Q5JRA6 1907 aa16.87■□□□□ 0.29
VAMP4-202ENST00000367740 EVPLQ92817 2033 aa16.87■□□□□ 0.29
VAMP4-202ENST00000367740 B4E1Z4 1266 aa16.86■□□□□ 0.29
VAMP4-202ENST00000367740 DCNP07585 359 aaKnown RBP16.86■□□□□ 0.29
VAMP4-202ENST00000367740 RFX1P22670 979 aa16.86■□□□□ 0.29
VAMP4-202ENST00000367740 CA8P35219 290 aa16.86■□□□□ 0.29
VAMP4-202ENST00000367740 NT5C2P49902 561 aa16.86■□□□□ 0.29
VAMP4-202ENST00000367740 FAM189BP81408 668 aa16.86■□□□□ 0.29
VAMP4-202ENST00000367740 FAM43BQ6ZT52 329 aaPredicted RBP16.86■□□□□ 0.29
VAMP4-202ENST00000367740 NLRX1Q86UT6 975 aa16.86■□□□□ 0.29
VAMP4-202ENST00000367740 C1orf210Q8IVY1 113 aa16.86■□□□□ 0.29
VAMP4-202ENST00000367740 SLC39A11Q8N1S5 342 aa16.86■□□□□ 0.29
VAMP4-202ENST00000367740 ELAC1Q9H777 363 aaKnown RBP16.86■□□□□ 0.29
VAMP4-202ENST00000367740 CA14Q9ULX7 337 aa16.86■□□□□ 0.29
VAMP4-202ENST00000367740 ST3GAL5Q9UNP4 418 aa16.86■□□□□ 0.29
VAMP4-202ENST00000367740 GINS2Q9Y248 185 aa16.86■□□□□ 0.29
VAMP4-202ENST00000367740 SALL3Q9BXA9 1300 aa16.86■□□□□ 0.29
VAMP4-202ENST00000367740 POTEMA6NI47 508 aa16.85■□□□□ 0.29
VAMP4-202ENST00000367740 KINO60870 393 aaKnown RBP16.85■□□□□ 0.29
VAMP4-202ENST00000367740 TRAF1Q13077 416 aa16.85■□□□□ 0.29
VAMP4-202ENST00000367740 COL9A2Q14055 689 aaPredicted RBP16.85■□□□□ 0.29
VAMP4-202ENST00000367740 PLCB4Q15147 1175 aa16.85■□□□□ 0.29
VAMP4-202ENST00000367740 POTEGQ6S5H5 508 aa16.85■□□□□ 0.29
VAMP4-202ENST00000367740 GPR149Q86SP6 731 aa16.85■□□□□ 0.29
VAMP4-202ENST00000367740 NME8Q8N427 588 aa16.85■□□□□ 0.29
VAMP4-202ENST00000367740 SLC22A17Q8WUG5 538 aa16.85■□□□□ 0.29
VAMP4-202ENST00000367740 EVI5LQ96CN4 794 aa16.85■□□□□ 0.29
VAMP4-202ENST00000367740 GPRASP2Q96D09 838 aa16.85■□□□□ 0.29
VAMP4-202ENST00000367740 IGSF9Q9P2J2 1179 aa16.85■□□□□ 0.29
VAMP4-202ENST00000367740 NCDNQ9UBB6 729 aa16.85■□□□□ 0.29
VAMP4-202ENST00000367740 CDV3Q9UKY7 258 aaKnown RBP16.85■□□□□ 0.29
VAMP4-202ENST00000367740 FRYQ5TBA9 3013 aa16.85■□□□□ 0.29
VAMP4-202ENST00000367740 DOCK8Q8NF50 2099 aa16.84■□□□□ 0.29
VAMP4-202ENST00000367740 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.84■□□□□ 0.29
VAMP4-202ENST00000367740 DCDC2BA2VCK2 349 aa16.84■□□□□ 0.29
VAMP4-202ENST00000367740 PALM3A6NDB9 673 aaPredicted RBP16.84■□□□□ 0.29
VAMP4-202ENST00000367740 N4BP1O75113 896 aaKnown RBP16.84■□□□□ 0.29
VAMP4-202ENST00000367740 VARS2Q5ST30 1063 aaKnown RBP16.84■□□□□ 0.29
VAMP4-202ENST00000367740 MTHFD1LQ6UB35 978 aa16.84■□□□□ 0.29
VAMP4-202ENST00000367740 MAML2Q8IZL2 1156 aaPredicted RBP16.84■□□□□ 0.29
VAMP4-202ENST00000367740 RSAD2Q8WXG1 361 aa16.84■□□□□ 0.29
VAMP4-202ENST00000367740 AUTS2Q8WXX7 1259 aa16.84■□□□□ 0.29
VAMP4-202ENST00000367740 ZBP1Q9H171 429 aa16.84■□□□□ 0.29
VAMP4-202ENST00000367740 RIOX1Q9H6W3 641 aa16.84■□□□□ 0.29
VAMP4-202ENST00000367740 PKD2L1Q9P0L9 805 aa16.84■□□□□ 0.29
VAMP4-202ENST00000367740 ZSWIM5Q9P217 1185 aa16.84■□□□□ 0.29
VAMP4-202ENST00000367740 ZNF213O14771 459 aa16.83■□□□□ 0.28
VAMP4-202ENST00000367740 CYTH3O43739 400 aa16.83■□□□□ 0.28
VAMP4-202ENST00000367740 GABBR2O75899 941 aa16.83■□□□□ 0.28
VAMP4-202ENST00000367740 CXCL14O95715 111 aa16.83■□□□□ 0.28
VAMP4-202ENST00000367740 NMIQ13287 307 aaPredicted RBP16.83■□□□□ 0.28
VAMP4-202ENST00000367740 DSC3Q14574 896 aa16.83■□□□□ 0.28
VAMP4-202ENST00000367740 CABP7Q86V35 215 aa16.83■□□□□ 0.28
VAMP4-202ENST00000367740 FAM228AQ86W67 206 aa16.83■□□□□ 0.28
VAMP4-202ENST00000367740 SFXN1Q9H9B4 322 aa16.83■□□□□ 0.28
VAMP4-202ENST00000367740 SPEGQ15772 3267 aa16.83■□□□□ 0.28
VAMP4-202ENST00000367740 GPR182O15218 404 aa16.82■□□□□ 0.28
VAMP4-202ENST00000367740 HOXA2O43364 376 aa16.82■□□□□ 0.28
VAMP4-202ENST00000367740 GLULP15104 373 aa16.82■□□□□ 0.28
VAMP4-202ENST00000367740 ITGB5P18084 799 aa16.82■□□□□ 0.28
VAMP4-202ENST00000367740 LMNB2Q03252 620 aa16.82■□□□□ 0.28
VAMP4-202ENST00000367740 ODR4Q5SWX8 454 aa16.82■□□□□ 0.28
VAMP4-202ENST00000367740 IFIT1BQ5T764 474 aaKnown RBP16.82■□□□□ 0.28
VAMP4-202ENST00000367740 PHLDB3Q6NSJ2 640 aa16.82■□□□□ 0.28
VAMP4-202ENST00000367740 USP17L6PQ6QN14 398 aa16.82■□□□□ 0.28
VAMP4-202ENST00000367740 GPR161Q8N6U8 529 aaKnown RBP16.82■□□□□ 0.28
VAMP4-202ENST00000367740 CDHR1Q96JP9 859 aa16.82■□□□□ 0.28
VAMP4-202ENST00000367740 RTKNQ9BST9 563 aa16.82■□□□□ 0.28
VAMP4-202ENST00000367740 PLSCR2Q9NRY7 297 aa16.82■□□□□ 0.28
VAMP4-202ENST00000367740 SIT1Q9Y3P8 196 aa16.82■□□□□ 0.28
VAMP4-202ENST00000367740 IRAK3Q9Y616 596 aa16.82■□□□□ 0.28
VAMP4-202ENST00000367740 COL4A3Q01955 1670 aa16.81■□□□□ 0.28
VAMP4-202ENST00000367740 PNMA6FA0A0J9YX94 578 aa16.81■□□□□ 0.28
VAMP4-202ENST00000367740 PRR5-ARHGAP8B1AHC4 643 aa16.81■□□□□ 0.28
VAMP4-202ENST00000367740 NT5C1B-RDH14C9J2C7 533 aa16.81■□□□□ 0.28
VAMP4-202ENST00000367740 SRFP11831 508 aa16.81■□□□□ 0.28
VAMP4-202ENST00000367740 METAP2P50579 478 aaKnown RBP eCLIP16.81■□□□□ 0.28
VAMP4-202ENST00000367740 ARHGAP8P85298 464 aa16.81■□□□□ 0.28
VAMP4-202ENST00000367740 LETM2Q2VYF4 491 aa16.81■□□□□ 0.28
VAMP4-202ENST00000367740 CLLU1OSQ5K130 101 aa16.81■□□□□ 0.28
VAMP4-202ENST00000367740 C20orf194Q5TEA3 1177 aa16.81■□□□□ 0.28
VAMP4-202ENST00000367740 TMEM173Q86WV6 379 aaPredicted RBP16.81■□□□□ 0.28
VAMP4-202ENST00000367740 ABI1Q8IZP0 508 aa16.81■□□□□ 0.28
VAMP4-202ENST00000367740 VPS52Q8N1B4 723 aa16.81■□□□□ 0.28
VAMP4-202ENST00000367740 SMARCC2Q8TAQ2 1214 aa16.81■□□□□ 0.28
VAMP4-202ENST00000367740 GPR152Q8TDT2 470 aa16.81■□□□□ 0.28
VAMP4-202ENST00000367740 CHAMP1Q96JM3 812 aa16.81■□□□□ 0.28
VAMP4-202ENST00000367740 AZI2Q9H6S1 392 aa16.81■□□□□ 0.28
VAMP4-202ENST00000367740 ZZEF1O43149 2961 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms