RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 TMEM119Q4V9L6 283 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 AADACL2Q6P093 401 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 LRIG3Q6UXM1 1119 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 TMC3Q7Z5M5 1100 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 SLC35G2Q8TBE7 412 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 RBM46Q8TBY0 533 aaKnown RBP8.88□□□□□ -0.99
CD46-208ENST00000367042 CHMP6Q96FZ7 201 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 CDCA7Q9BWT1 371 aaPredicted RBP8.88□□□□□ -0.99
CD46-208ENST00000367042 RTFDC1Q9BY42 306 aaPredicted RBP8.88□□□□□ -0.99
CD46-208ENST00000367042 GANQ9H2C0 597 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 DHX36Q9H2U1 1008 aaKnown RBP8.88□□□□□ -0.99
CD46-208ENST00000367042 LRRC4CQ9HCJ2 640 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 STK38LQ9Y2H1 464 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 TTLL1O95922 423 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 ZKSCAN8Q15776 578 aaPredicted RBP8.88□□□□□ -0.99
CD46-208ENST00000367042 TBC1D10BQ4KMP7 808 aaPredicted RBP8.88□□□□□ -0.99
CD46-208ENST00000367042 ZCWPW2Q504Y3 356 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 COBLL1Q53SF7 1204 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 ANKRD20A8PQ5CZ79 823 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 ZNF746Q6NUN9 644 aaPredicted RBP8.88□□□□□ -0.99
CD46-208ENST00000367042 IRF2BP2Q7Z5L9 587 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 TPH2Q8IWU9 490 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 CCDC105Q8IYK2 499 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 NEK9Q8TD19 979 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 ACTRT1Q8TDG2 376 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 PRMT1Q99873 361 aaKnown RBP8.88□□□□□ -0.99
CD46-208ENST00000367042 TACO1Q9BSH4 297 aaKnown RBP8.88□□□□□ -0.99
CD46-208ENST00000367042 VEZTQ9HBM0 779 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 RASAL2Q9UJF2 1139 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 F8VZ95 297 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 HOXA13P31271 388 aaPredicted RBP8.88□□□□□ -0.99
CD46-208ENST00000367042 MESDQ14696 234 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 SEPT2Q15019 361 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 C10orf76Q5T2E6 689 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 FAM186BQ8IYM0 893 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 FUKQ8N0W3 1084 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 CCDC63Q8NA47 563 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 CNBD1Q8NA66 436 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 SCFD2Q8WU76 684 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 PAIP2Q9BPZ3 127 aaKnown RBP8.88□□□□□ -0.99
CD46-208ENST00000367042 ANO3Q9BYT9 981 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 RIOX1Q9H6W3 641 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 CD209Q9NNX6 404 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 PPP1R9AQ9ULJ8 1098 aa8.88□□□□□ -0.99
CD46-208ENST00000367042 COL5A3P25940 1745 aaPredicted RBP8.87□□□□□ -0.99
CD46-208ENST00000367042 ESYT2A0FGR8 921 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 DDX3XO00571 662 aaKnown RBP eCLIP8.87□□□□□ -0.997e-37■■□□□ 14.4
CD46-208ENST00000367042 VPS41P49754 854 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 PMS2P54278 862 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 UBXN2AP68543 259 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 SLC29A2Q14542 456 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 DRAP1Q14919 205 aaPredicted RBP8.87□□□□□ -0.99
CD46-208ENST00000367042 ZC2HC1CQ53FD0 456 aaPredicted RBP8.87□□□□□ -0.99
CD46-208ENST00000367042 CHADLQ6NUI6 762 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 CATSPER3Q86XQ3 398 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 SLF2Q8IX21 1173 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 FBXO25Q8TCJ0 367 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 SGSM3Q96HU1 749 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 XPO6Q96QU8 1125 aaKnown RBP8.87□□□□□ -0.99
CD46-208ENST00000367042 RGL1Q9NZL6 768 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 MTRF1LQ9UGC7 380 aaKnown RBP8.87□□□□□ -0.99
CD46-208ENST00000367042 GGA1Q9UJY5 639 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 DNAJC12Q9UKB3 198 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 AJAP1Q9UKB5 411 aaPredicted RBP8.87□□□□□ -0.99
CD46-208ENST00000367042 ZBTB5O15062 677 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 SCP2P22307 547 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 NMT1P30419 496 aaKnown RBP8.87□□□□□ -0.99
CD46-208ENST00000367042 CACNB3P54284 484 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 CTTNQ14247 550 aaKnown RBP8.87□□□□□ -0.99
CD46-208ENST00000367042 BARGINQ6ZT62 677 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 YTHDF3Q7Z739 585 aaKnown RBP8.87□□□□□ -0.99
CD46-208ENST00000367042 KCTD10Q9H3F6 313 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 SLITRK6Q9H5Y7 841 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 PKD2L1Q9P0L9 805 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 DBR1Q9UK59 544 aaKnown RBP8.87□□□□□ -0.99
CD46-208ENST00000367042 TPX2Q9ULW0 747 aaKnown RBP8.87□□□□□ -0.99
CD46-208ENST00000367042 SUFUQ9UMX1 484 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 ZNF831Q5JPB2 1677 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 CCDC169A6NNP5 214 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 SPOPO43791 374 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 PPP1R11O60927 126 aaPredicted RBP8.87□□□□□ -0.99
CD46-208ENST00000367042 TRIM37O94972 964 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 ACSL3O95573 720 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 FERP16591 822 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 ECHS1P30084 290 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 ELF1P32519 619 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 IFI35P80217 286 aaPredicted RBP8.87□□□□□ -0.99
CD46-208ENST00000367042 ZNF543Q08ER8 600 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 ORC2Q13416 577 aaPredicted RBP8.87□□□□□ -0.99
CD46-208ENST00000367042 ZFYVE27Q5T4F4 411 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 HS2ST1Q7LGA3 356 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 PTF1AQ7RTS3 328 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 NT5DC3Q86UY8 548 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 C18orf8Q96DM3 657 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 CALR3Q96L12 384 aaKnown RBP8.87□□□□□ -0.99
CD46-208ENST00000367042 SLC12A6Q9UHW9 1150 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 SERPINB13Q9UIV8 391 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 FRMD4BQ9Y2L6 1034 aa8.87□□□□□ -0.99
CD46-208ENST00000367042 LRP5O75197 1615 aa8.86□□□□□ -0.99
CD46-208ENST00000367042 EIF4E1BA6NMX2 242 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms