RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 NFU1Q9UMS0 254 aa16.07■□□□□ 0.16
PRKN-204ENST00000366896 PCDHA12Q9UN75 941 aa16.07■□□□□ 0.16
PRKN-204ENST00000366896 ATAD5Q96QE3 1844 aa16.07■□□□□ 0.16
PRKN-204ENST00000366896 MDH1P40925 334 aaKnown RBP16.06■□□□□ 0.16
PRKN-204ENST00000366896 SMTNP53814 917 aa16.06■□□□□ 0.16
PRKN-204ENST00000366896 NBPF12Q5TAG4 269 aaPredicted RBP16.06■□□□□ 0.16
PRKN-204ENST00000366896 KCTD1Q719H9 257 aa16.06■□□□□ 0.16
PRKN-204ENST00000366896 MIGA2Q7L4E1 593 aa16.06■□□□□ 0.16
PRKN-204ENST00000366896 NLRP14Q86W24 1093 aa16.06■□□□□ 0.16
PRKN-204ENST00000366896 MBOAT7Q96N66 472 aa16.06■□□□□ 0.16
PRKN-204ENST00000366896 CCT8L2Q96SF2 557 aa16.06■□□□□ 0.16
PRKN-204ENST00000366896 CYP3A7-CYP3A51PA0A087WV96 503 aa16.06■□□□□ 0.16
PRKN-204ENST00000366896 POTEB3A0JP26 581 aa16.06■□□□□ 0.16
PRKN-204ENST00000366896 ZBTB5O15062 677 aa16.06■□□□□ 0.16
PRKN-204ENST00000366896 MARCH6O60337 910 aa16.06■□□□□ 0.16
PRKN-204ENST00000366896 CYP3A7P24462 503 aa16.06■□□□□ 0.16
PRKN-204ENST00000366896 USP11P51784 963 aa16.06■□□□□ 0.16
PRKN-204ENST00000366896 RRP1BQ14684 758 aaKnown RBP16.06■□□□□ 0.16
PRKN-204ENST00000366896 CERKLQ49MI3 558 aaPredicted RBP16.06■□□□□ 0.16
PRKN-204ENST00000366896 EAPPQ56P03 285 aaPredicted RBP16.06■□□□□ 0.16
PRKN-204ENST00000366896 PRAMEF18Q5VWM3 479 aa16.06■□□□□ 0.16
PRKN-204ENST00000366896 POTEBQ6S5H4 581 aa16.06■□□□□ 0.16
PRKN-204ENST00000366896 PNMA8AQ86V59 439 aaPredicted RBP16.06■□□□□ 0.16
PRKN-204ENST00000366896 ZKSCAN4Q969J2 545 aaPredicted RBP16.06■□□□□ 0.16
PRKN-204ENST00000366896 ATP6V1G3Q96LB4 118 aa16.06■□□□□ 0.16
PRKN-204ENST00000366896 CCDC17Q96LX7 622 aa16.06■□□□□ 0.16
PRKN-204ENST00000366896 KCTD10Q9H3F6 313 aa16.06■□□□□ 0.16
PRKN-204ENST00000366896 KIAA1024Q9UPX6 916 aa16.06■□□□□ 0.16
PRKN-204ENST00000366896 PALMO75781 387 aa16.05■□□□□ 0.16
PRKN-204ENST00000366896 RASSF9O75901 435 aa16.05■□□□□ 0.16
PRKN-204ENST00000366896 FTCDO95954 541 aa16.05■□□□□ 0.16
PRKN-204ENST00000366896 FAM107AO95990 144 aa16.05■□□□□ 0.16
PRKN-204ENST00000366896 ANXA13P27216 316 aa16.05■□□□□ 0.16
PRKN-204ENST00000366896 ARID5AQ03989 594 aa16.05■□□□□ 0.16
PRKN-204ENST00000366896 ENOX2Q16206 610 aaKnown RBP16.05■□□□□ 0.16
PRKN-204ENST00000366896 C6orf89Q6UWU4 347 aa16.05■□□□□ 0.16
PRKN-204ENST00000366896 EPB41L5Q9HCM4 733 aa16.05■□□□□ 0.16
PRKN-204ENST00000366896 POLD4Q9HCU8 107 aa16.05■□□□□ 0.16
PRKN-204ENST00000366896 CEP83Q9Y592 693 aa16.05■□□□□ 0.16
PRKN-204ENST00000366896 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.05■□□□□ 0.16
PRKN-204ENST00000366896 HMGB1P1B2RPK0 211 aaPredicted RBP16.05■□□□□ 0.16
PRKN-204ENST00000366896 HEXIM1O94992 359 aaKnown RBP16.05■□□□□ 0.16
PRKN-204ENST00000366896 STAT3P40763 770 aa16.05■□□□□ 0.16
PRKN-204ENST00000366896 DRP2Q13474 957 aa16.05■□□□□ 0.16
PRKN-204ENST00000366896 SHROOM1Q2M3G4 852 aaPredicted RBP16.05■□□□□ 0.16
PRKN-204ENST00000366896 MEI1Q5TIA1 1274 aa16.05■□□□□ 0.16
PRKN-204ENST00000366896 SCFD1Q8WVM8 642 aa16.05■□□□□ 0.16
PRKN-204ENST00000366896 RRAGCQ9HB90 399 aa16.05■□□□□ 0.16
PRKN-204ENST00000366896 CD248Q9HCU0 757 aa16.05■□□□□ 0.16
PRKN-204ENST00000366896 KCNMB3Q9NPA1 279 aa16.05■□□□□ 0.16
PRKN-204ENST00000366896 KLC4Q9NSK0 619 aa16.05■□□□□ 0.16
PRKN-204ENST00000366896 ZSCAN5CA6NGD5 496 aaPredicted RBP16.04■□□□□ 0.16
PRKN-204ENST00000366896 USP17L15C9J2P7 530 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 USP17L13C9JLJ4 530 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 ADM5C9JUS6 153 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 USP17L11C9JVI0 530 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 USP17L18D6R9N7 530 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 USP17L22D6RA61 530 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 USP17L17D6RBQ6 530 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 USP17L19D6RCP7 530 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 USP17L20D6RJB6 530 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 KIF1CO43896 1103 aaKnown RBP16.04■□□□□ 0.16
PRKN-204ENST00000366896 PLA2G4BP0C869 781 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 KLRC1P26715 233 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 SEC24CP53992 1094 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 USP17L24Q0WX57 530 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 ITGB3BPQ13352 177 aaPredicted RBP16.04■□□□□ 0.16
PRKN-204ENST00000366896 USP17L6PQ6QN14 398 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 GPBP1Q86WP2 473 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 SULF1Q8IWU6 871 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 CCDC13Q8IYE1 715 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 TBC1D5Q92609 795 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 PACSIN1Q9BY11 444 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 PSTPIP2Q9H939 334 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 PLCB1Q9NQ66 1216 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 PACSIN2Q9UNF0 486 aaPredicted RBP16.04■□□□□ 0.16
PRKN-204ENST00000366896 MPHOSPH10O00566 681 aaKnown RBP16.04■□□□□ 0.16
PRKN-204ENST00000366896 GDF11O95390 407 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 GUCY2DQ02846 1103 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 RAPGEF1Q13905 1077 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 RNF187Q5TA31 235 aaPredicted RBP16.04■□□□□ 0.16
PRKN-204ENST00000366896 WHAMMQ8TF30 809 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 GANQ9H2C0 597 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 STK24Q9Y6E0 443 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 BZW2Q9Y6E2 419 aaKnown RBP16.04■□□□□ 0.16
PRKN-204ENST00000366896 SSC5DA1L4H1 1573 aa16.04■□□□□ 0.16
PRKN-204ENST00000366896 A0A087X0T9 212 aa16.03■□□□□ 0.16
PRKN-204ENST00000366896 ESYT3A0FGR9 886 aa16.03■□□□□ 0.16
PRKN-204ENST00000366896 FAM228BP0C875 321 aa16.03■□□□□ 0.16
PRKN-204ENST00000366896 CYP11B2P19099 503 aa16.03■□□□□ 0.16
PRKN-204ENST00000366896 JAG1P78504 1218 aa16.03■□□□□ 0.16
PRKN-204ENST00000366896 HERC4Q5GLZ8 1057 aaPredicted RBP16.03■□□□□ 0.16
PRKN-204ENST00000366896 DLK2Q6UY11 383 aa16.03■□□□□ 0.16
PRKN-204ENST00000366896 SLFN12Q8IYM2 578 aa16.03■□□□□ 0.16
PRKN-204ENST00000366896 FAM133AQ8N9E0 248 aa16.03■□□□□ 0.16
PRKN-204ENST00000366896 IFT81Q8WYA0 676 aa16.03■□□□□ 0.16
PRKN-204ENST00000366896 INPP4AQ96PE3 977 aaPredicted RBP16.03■□□□□ 0.16
PRKN-204ENST00000366896 POTEIP0CG38 1075 aa16.03■□□□□ 0.16
PRKN-204ENST00000366896 POTEJP0CG39 1038 aa16.03■□□□□ 0.16
PRKN-204ENST00000366896 IFT88Q13099 833 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms