RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 TBC1D22BQ9NU19 505 aa11.99□□□□□ -0.49
H3F3A-202ENST00000366814 SEL1LQ9UBV2 794 aa11.99□□□□□ -0.49
H3F3A-202ENST00000366814 FAM184BQ9ULE4 1060 aa11.99□□□□□ -0.49
H3F3A-202ENST00000366814 ELNP15502 786 aa11.98□□□□□ -0.49
H3F3A-202ENST00000366814 RPL13P26373 211 aaKnown RBP11.98□□□□□ -0.49
H3F3A-202ENST00000366814 MAPK4P31152 587 aa11.98□□□□□ -0.49
H3F3A-202ENST00000366814 CYLC1P35663 651 aaPredicted RBP11.98□□□□□ -0.49
H3F3A-202ENST00000366814 CCNA1P78396 465 aa11.98□□□□□ -0.49
H3F3A-202ENST00000366814 IRF5Q13568 498 aa11.98□□□□□ -0.49
H3F3A-202ENST00000366814 MTF1Q14872 753 aa11.98□□□□□ -0.49
H3F3A-202ENST00000366814 WDR78Q5VTH9 848 aa11.98□□□□□ -0.49
H3F3A-202ENST00000366814 RINT1Q6NUQ1 792 aa11.98□□□□□ -0.49
H3F3A-202ENST00000366814 XRRA1Q6P2D8 792 aa11.98□□□□□ -0.49
H3F3A-202ENST00000366814 TRIM65Q6PJ69 517 aa11.98□□□□□ -0.49
H3F3A-202ENST00000366814 MAF1Q9H063 256 aa11.98□□□□□ -0.49
H3F3A-202ENST00000366814 OLFML3Q9NRN5 406 aa11.98□□□□□ -0.49
H3F3A-202ENST00000366814 KCNH7Q9NS40 1196 aa11.98□□□□□ -0.49
H3F3A-202ENST00000366814 ODF2LQ9ULJ1 636 aa11.98□□□□□ -0.49
H3F3A-202ENST00000366814 FRMPD4Q14CM0 1322 aa11.98□□□□□ -0.49
H3F3A-202ENST00000366814 PARP14Q460N5 1801 aa11.98□□□□□ -0.49
H3F3A-202ENST00000366814 SPDYE16A6NNV3 312 aaPredicted RBP11.97□□□□□ -0.49
H3F3A-202ENST00000366814 PDXKO00764 312 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 EN2P19622 333 aaPredicted RBP11.97□□□□□ -0.49
H3F3A-202ENST00000366814 MARSP56192 900 aaKnown RBP11.97□□□□□ -0.49
H3F3A-202ENST00000366814 RPS6P62753 249 aaKnown RBP11.97□□□□□ -0.49
H3F3A-202ENST00000366814 KRT83P78385 493 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 PPP2R3AQ06190 1150 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 ADAM9Q13443 819 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 MTMR1Q13613 665 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 MTFR1Q15390 333 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 KNOP1Q1ED39 458 aaKnown RBP11.97□□□□□ -0.49
H3F3A-202ENST00000366814 TKFCQ3LXA3 575 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 ARHGEF16Q5VV41 709 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 NSMFQ6X4W1 530 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 GLIS3Q8NEA6 775 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 NEK11Q8NG66 645 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 PIGOQ8TEQ8 1089 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 ATG4CQ96DT6 458 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 CCDC43Q96MW1 224 aaKnown RBP11.97□□□□□ -0.49
H3F3A-202ENST00000366814 LXNQ9BS40 222 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 TTYH3Q9C0H2 523 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 KCTD10Q9H3F6 313 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 L2HGDHQ9H9P8 463 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 PARVGQ9HBI0 331 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 JADE2Q9NQC1 790 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 RNF146Q9NTX7 359 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 TRAF3IP3Q9Y228 551 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 UBIAD1Q9Y5Z9 338 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 UBE4BO95155 1302 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 ARHGEF35A5YM69 484 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 EIF3DO15371 548 aaKnown RBP eCLIP11.97□□□□□ -0.49
H3F3A-202ENST00000366814 CNMDO75829 334 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 GCNT3O95395 438 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 P4HBP07237 508 aaKnown RBP11.97□□□□□ -0.49
H3F3A-202ENST00000366814 ITGB5P18084 799 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 NR2F2P24468 414 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 PGM5Q15124 567 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 BMT2Q1RMZ1 405 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 MUM1L1Q5H9M0 696 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 LBX2Q6XYB7 198 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 PLEKHH3Q7Z736 793 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 CCDC170Q8IYT3 715 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 MYCT1Q8N699 235 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 PXYLP1Q8TE99 480 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 RMDN3Q96TC7 470 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 RUSC1Q9BVN2 902 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 EDEM3Q9BZQ6 932 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 RNF208Q9H0X6 261 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 NUCKS1Q9H1E3 243 aaKnown RBP11.97□□□□□ -0.49
H3F3A-202ENST00000366814 PORCNQ9H237 461 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 ZSWIM4Q9H7M6 989 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 MMRN2Q9H8L6 949 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 AGO4Q9HCK5 861 aaKnown RBP11.97□□□□□ -0.49
H3F3A-202ENST00000366814 TYW1Q9NV66 732 aaKnown RBP11.97□□□□□ -0.49
H3F3A-202ENST00000366814 BTBD7Q9P203 1132 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 COL20A1Q9P218 1284 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 MYO1AQ9UBC5 1043 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 GJD2Q9UKL4 321 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 SAMM50Q9Y512 469 aa11.97□□□□□ -0.49
H3F3A-202ENST00000366814 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.97□□□□□ -0.49
H3F3A-202ENST00000366814 EPN1Q9Y6I3 576 aaPredicted RBP11.97□□□□□ -0.49
H3F3A-202ENST00000366814 DDX39AO00148 427 aaKnown RBP11.96□□□□□ -0.49
H3F3A-202ENST00000366814 URI1O94763 535 aaPredicted RBP11.96□□□□□ -0.49
H3F3A-202ENST00000366814 NDUFA10O95299 355 aa11.96□□□□□ -0.49
H3F3A-202ENST00000366814 MYCLP12524 364 aaPredicted RBP11.96□□□□□ -0.49
H3F3A-202ENST00000366814 CCL5P13501 91 aa11.96□□□□□ -0.49
H3F3A-202ENST00000366814 EIF2AK2P19525 551 aaKnown RBP11.96□□□□□ -0.49
H3F3A-202ENST00000366814 CYP2B6P20813 491 aa11.96□□□□□ -0.49
H3F3A-202ENST00000366814 CCND2P30279 289 aa11.96□□□□□ -0.49
H3F3A-202ENST00000366814 CDK17Q00537 523 aa11.96□□□□□ -0.49
H3F3A-202ENST00000366814 MEA1Q16626 185 aa11.96□□□□□ -0.49
H3F3A-202ENST00000366814 SNRNP48Q6IEG0 339 aaKnown RBP11.96□□□□□ -0.49
H3F3A-202ENST00000366814 B3GNT9Q6UX72 402 aa11.96□□□□□ -0.49
H3F3A-202ENST00000366814 EPM2AIP1Q7L775 607 aaPredicted RBP11.96□□□□□ -0.49
H3F3A-202ENST00000366814 CACNA2D4Q7Z3S7 1137 aa11.96□□□□□ -0.49
H3F3A-202ENST00000366814 GPR142Q7Z601 462 aa11.96□□□□□ -0.49
H3F3A-202ENST00000366814 ZC3H3Q8IXZ2 948 aaKnown RBP11.96□□□□□ -0.49
H3F3A-202ENST00000366814 LZTFL1Q9NQ48 299 aa11.96□□□□□ -0.49
H3F3A-202ENST00000366814 PXMP2Q9NR77 195 aa11.96□□□□□ -0.49
H3F3A-202ENST00000366814 RNF225M0QZC1 329 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms