RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 NAA25Q14CX7 972 aa20.72■□□□□ 0.91
CMTM3-201ENST00000361909 E2F5Q15329 346 aa20.72■□□□□ 0.91
CMTM3-201ENST00000361909 CROCCP2Q86T23 111 aa20.72■□□□□ 0.91
CMTM3-201ENST00000361909 KLHL7Q8IXQ5 586 aa20.72■□□□□ 0.91
CMTM3-201ENST00000361909 UBLCP1Q8WVY7 318 aaPredicted RBP20.72■□□□□ 0.91
CMTM3-201ENST00000361909 CALML4Q96GE6 196 aa20.72■□□□□ 0.91
CMTM3-201ENST00000361909 LRRC27Q9C0I9 530 aa20.72■□□□□ 0.91
CMTM3-201ENST00000361909 FBXL5Q9UKA1 691 aa20.72■□□□□ 0.91
CMTM3-201ENST00000361909 NOVA2Q9UNW9 492 aaKnown RBP20.72■□□□□ 0.91
CMTM3-201ENST00000361909 MYH7BA7E2Y1 1941 aa20.72■□□□□ 0.91
CMTM3-201ENST00000361909 KIF4AO95239 1232 aa20.72■□□□□ 0.91
CMTM3-201ENST00000361909 TMOD1P28289 359 aa20.72■□□□□ 0.91
CMTM3-201ENST00000361909 PSMD2Q13200 908 aa20.72■□□□□ 0.91
CMTM3-201ENST00000361909 LRRC55Q6ZSA7 311 aa20.72■□□□□ 0.91
CMTM3-201ENST00000361909 TMC3Q7Z5M5 1100 aa20.72■□□□□ 0.91
CMTM3-201ENST00000361909 CCDC63Q8NA47 563 aa20.72■□□□□ 0.91
CMTM3-201ENST00000361909 CCDC26Q8TAB7 109 aa20.72■□□□□ 0.91
CMTM3-201ENST00000361909 LRRC15Q8TF66 581 aa20.72■□□□□ 0.91
CMTM3-201ENST00000361909 CSRNP1Q96S65 589 aa20.72■□□□□ 0.91
CMTM3-201ENST00000361909 PCDHA6Q9UN73 950 aa20.72■□□□□ 0.91
CMTM3-201ENST00000361909 PCDHA8Q9Y5H6 950 aa20.72■□□□□ 0.91
CMTM3-201ENST00000361909 TCP10L2B9ZVM9 353 aa20.71■□□□□ 0.91
CMTM3-201ENST00000361909 WNT10BO00744 389 aa20.71■□□□□ 0.91
CMTM3-201ENST00000361909 ANXA13P27216 316 aa20.71■□□□□ 0.91
CMTM3-201ENST00000361909 PRELPP51888 382 aa20.71■□□□□ 0.91
CMTM3-201ENST00000361909 EEF2KMTQ96G04 330 aa20.71■□□□□ 0.91
CMTM3-201ENST00000361909 SPZ1Q9BXG8 430 aa20.71■□□□□ 0.91
CMTM3-201ENST00000361909 KANSL2Q9H9L4 492 aa20.71■□□□□ 0.91
CMTM3-201ENST00000361909 CNOT8Q9UFF9 292 aaKnown RBP20.71■□□□□ 0.91
CMTM3-201ENST00000361909 MYH4Q9Y623 1939 aa20.71■□□□□ 0.91
CMTM3-201ENST00000361909 CLRN2A0PK11 232 aa20.7■□□□□ 0.91
CMTM3-201ENST00000361909 LIN7AO14910 233 aaPredicted RBP20.7■□□□□ 0.91
CMTM3-201ENST00000361909 SNHG28P0DPA3 235 aa20.7■□□□□ 0.91
CMTM3-201ENST00000361909 MAGOHP61326 146 aaKnown RBP20.7■□□□□ 0.91
CMTM3-201ENST00000361909 GRIK3Q13003 919 aa20.7■□□□□ 0.91
CMTM3-201ENST00000361909 KIAA0753Q2KHM9 967 aa20.7■□□□□ 0.91
CMTM3-201ENST00000361909 KRT71Q3SY84 523 aa20.7■□□□□ 0.91
CMTM3-201ENST00000361909 SV2BQ7L1I2 683 aa20.7■□□□□ 0.91
CMTM3-201ENST00000361909 MKL1Q969V6 931 aa20.7■□□□□ 0.91
CMTM3-201ENST00000361909 MAGOHBQ96A72 148 aaKnown RBP20.7■□□□□ 0.91
CMTM3-201ENST00000361909 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.7■□□□□ 0.912e-6■■□□□ 14.2
CMTM3-201ENST00000361909 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.7■□□□□ 0.911e-6■■■■□ 20.6
CMTM3-201ENST00000361909 C15orf41Q9Y2V0 281 aa20.7■□□□□ 0.91
CMTM3-201ENST00000361909 CNTNAP1P78357 1384 aa20.7■□□□□ 0.91
CMTM3-201ENST00000361909 GOLGA6L10A0A0M3HER8 536 aa20.7■□□□□ 0.9
CMTM3-201ENST00000361909 F8VZ95 297 aa20.7■□□□□ 0.9
CMTM3-201ENST00000361909 MPHOSPH10O00566 681 aaKnown RBP20.7■□□□□ 0.9
CMTM3-201ENST00000361909 KCNK3O14649 394 aa20.7■□□□□ 0.9
CMTM3-201ENST00000361909 GNA14O95837 355 aa20.7■□□□□ 0.9
CMTM3-201ENST00000361909 PPP1R7Q15435 360 aa20.7■□□□□ 0.9
CMTM3-201ENST00000361909 FAM83BQ5T0W9 1011 aa20.7■□□□□ 0.9
CMTM3-201ENST00000361909 HIBCHQ6NVY1 386 aaPredicted RBP20.7■□□□□ 0.9
CMTM3-201ENST00000361909 TMEM179Q6ZVK1 233 aa20.7■□□□□ 0.9
CMTM3-201ENST00000361909 NSRP1Q9H0G5 558 aaKnown RBP20.7■□□□□ 0.9
CMTM3-201ENST00000361909 CCDC134Q9H6E4 229 aa20.7■□□□□ 0.9
CMTM3-201ENST00000361909 AIPL1Q9NZN9 384 aa20.7■□□□□ 0.9
CMTM3-201ENST00000361909 NYAP2Q9P242 653 aa20.7■□□□□ 0.9
CMTM3-201ENST00000361909 KLRF2D3W0D1 207 aa20.69■□□□□ 0.9
CMTM3-201ENST00000361909 TBC1D12O60347 775 aa20.69■□□□□ 0.9
CMTM3-201ENST00000361909 TRADDQ15628 312 aa20.69■□□□□ 0.9
CMTM3-201ENST00000361909 PPP2R5EQ16537 467 aa20.69■□□□□ 0.9
CMTM3-201ENST00000361909 ASPRV1Q53RT3 343 aa20.69■□□□□ 0.9
CMTM3-201ENST00000361909 KRT25Q7Z3Z0 450 aa20.69■□□□□ 0.9
CMTM3-201ENST00000361909 PLIN2Q99541 437 aa20.69■□□□□ 0.9
CMTM3-201ENST00000361909 FHDC1Q9C0D6 1143 aaPredicted RBP20.69■□□□□ 0.9
CMTM3-201ENST00000361909 BCCIPQ9P287 314 aaKnown RBP eCLIP20.69■□□□□ 0.9
CMTM3-201ENST00000361909 DICER1Q9UPY3 1922 aaKnown RBP20.69■□□□□ 0.9
CMTM3-201ENST00000361909 SART1O43290 800 aaKnown RBP20.69■□□□□ 0.9
CMTM3-201ENST00000361909 ALADP13716 330 aa20.69■□□□□ 0.9
CMTM3-201ENST00000361909 KCNMA1Q12791 1236 aa20.69■□□□□ 0.9
CMTM3-201ENST00000361909 INF2Q27J81 1249 aa20.69■□□□□ 0.9
CMTM3-201ENST00000361909 PIGWQ7Z7B1 504 aa20.69■□□□□ 0.9
CMTM3-201ENST00000361909 OR2W6PQ8NHA6 318 aa20.69■□□□□ 0.9
CMTM3-201ENST00000361909 ANKRD27Q96NW4 1050 aa20.69■□□□□ 0.9
CMTM3-201ENST00000361909 NOP53Q9NZM5 478 aaKnown RBP20.69■□□□□ 0.9
CMTM3-201ENST00000361909 OPLAHO14841 1288 aa20.68■□□□□ 0.9
CMTM3-201ENST00000361909 ADAMTS3O15072 1205 aa20.68■□□□□ 0.9
CMTM3-201ENST00000361909 TLR2O60603 784 aa20.68■□□□□ 0.9
CMTM3-201ENST00000361909 RASGEF1CQ8N431 466 aa20.68■□□□□ 0.9
CMTM3-201ENST00000361909 ARMC2Q8NEN0 867 aa20.68■□□□□ 0.9
CMTM3-201ENST00000361909 CEP63Q96MT8 703 aa20.68■□□□□ 0.9
CMTM3-201ENST00000361909 ZNF317Q96PQ6 595 aaPredicted RBP20.68■□□□□ 0.9
CMTM3-201ENST00000361909 SLC39A2Q9NP94 309 aa20.68■□□□□ 0.9
CMTM3-201ENST00000361909 HOMER3Q9NSC5 361 aa20.68■□□□□ 0.9
CMTM3-201ENST00000361909 BAIAP2L1Q9UHR4 511 aa20.68■□□□□ 0.9
CMTM3-201ENST00000361909 COL4A3BPQ9Y5P4 624 aa20.68■□□□□ 0.9
CMTM3-201ENST00000361909 BZW2Q9Y6E2 419 aaKnown RBP20.68■□□□□ 0.9
CMTM3-201ENST00000361909 NKRFO15226 690 aaKnown RBP eCLIP20.68■□□□□ 0.92e-6■■■□□ 16.7
CMTM3-201ENST00000361909 PPFIA2O75334 1257 aa20.68■□□□□ 0.9
CMTM3-201ENST00000361909 TNNI2P48788 182 aa20.68■□□□□ 0.9
CMTM3-201ENST00000361909 ZNF268Q14587 947 aaPredicted RBP20.68■□□□□ 0.9
CMTM3-201ENST00000361909 ABCB5Q2M3G0 1257 aa20.68■□□□□ 0.9
CMTM3-201ENST00000361909 LMBR1Q8WVP7 490 aa20.68■□□□□ 0.9
CMTM3-201ENST00000361909 TBC1D5Q92609 795 aa20.68■□□□□ 0.9
CMTM3-201ENST00000361909 PGM2Q96G03 612 aa20.68■□□□□ 0.9
CMTM3-201ENST00000361909 TANGO6Q9C0B7 1094 aa20.68■□□□□ 0.9
CMTM3-201ENST00000361909 SAMD15Q9P1V8 674 aa20.68■□□□□ 0.9
CMTM3-201ENST00000361909 CYTH3O43739 400 aa20.67■□□□□ 0.9
CMTM3-201ENST00000361909 NUDT17P0C025 328 aa20.67■□□□□ 0.9
CMTM3-201ENST00000361909 LMNB1P20700 586 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms