RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 RILPQ96NA2 401 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 GJB4Q9NTQ9 266 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 INPP5BP32019 993 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 ASPHQ12797 758 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 PPP2R5CQ13362 524 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 SNAPC2Q13487 334 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 TRIM42Q8IWZ5 723 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 CCNYQ8ND76 341 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 EDEM3Q9BZQ6 932 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 SFI1A8K8P3 1242 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 SLC25A27O95847 323 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 SRBD1Q8N5C6 995 aaKnown RBP14.51□□□□□ -0.09
LDB3-202ENST00000361373 ANKRD42Q8N9B4 389 aa14.51□□□□□ -0.09
LDB3-202ENST00000361373 ZFP91Q96JP5 570 aaPredicted RBP14.51□□□□□ -0.09
LDB3-202ENST00000361373 NOC2LQ9Y3T9 749 aaKnown RBP14.51□□□□□ -0.09
LDB3-202ENST00000361373 NOL3O60936 208 aaKnown RBP14.5□□□□□ -0.09
LDB3-202ENST00000361373 CALB1P05937 261 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 RFX5P48382 616 aaPredicted RBP14.5□□□□□ -0.09
LDB3-202ENST00000361373 KPNA2P52292 529 aaKnown RBP14.5□□□□□ -0.09
LDB3-202ENST00000361373 RWDD2BP57060 319 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 SLMAPQ14BN4 828 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 MAP3K21Q5TCX8 1036 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 EIF2AK1Q9BQI3 630 aaKnown RBP14.5□□□□□ -0.09
LDB3-202ENST00000361373 IQSEC2Q5JU85 1478 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 MAFGO15525 162 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 GPC3P51654 580 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 ZNF699Q32M78 642 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 NAA35Q5VZE5 725 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 ARHGEF18Q6ZSZ5 1173 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 TOGARAM2Q6ZUX3 1019 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 CEP57Q86XR8 500 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 CALN1Q9BXU9 219 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 VCXQ9H320 206 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.5□□□□□ -0.09
LDB3-202ENST00000361373 KCND2Q9NZV8 630 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 NRBP1Q9UHY1 535 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 LRRD1A4D1F6 860 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 CCDC188H7C350 402 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 PDE1BQ01064 536 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 R3HDM1Q15032 1099 aaKnown RBP14.5□□□□□ -0.09
LDB3-202ENST00000361373 PTPROQ16827 1216 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 URGCPQ8TCY9 931 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 IGDCC4Q8TDY8 1250 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 PARK7Q99497 189 aaKnown RBP14.5□□□□□ -0.09
LDB3-202ENST00000361373 JPH1Q9HDC5 661 aaPredicted RBP14.5□□□□□ -0.09
LDB3-202ENST00000361373 GOLGA8QA0A0J9YX86 632 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 GOLGA8OA6NCC3 632 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 GOLGA8NF8WBI6 632 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 SLC16A4O15374 487 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 TSPY1Q01534 308 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 BCL2L12Q9HB09 334 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 ADAMTS1Q9UHI8 967 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 MTMR2Q13614 643 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 TFDP2Q14188 446 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 XKR3Q5GH77 459 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 FAM71BQ8TC56 605 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 ADAM22Q9P0K1 906 aa14.5□□□□□ -0.09
LDB3-202ENST00000361373 ZNF609O15014 1411 aa14.49□□□□□ -0.09
LDB3-202ENST00000361373 TNPO2O14787 897 aaKnown RBP14.49□□□□□ -0.09
LDB3-202ENST00000361373 KRT39Q6A163 491 aa14.49□□□□□ -0.09
LDB3-202ENST00000361373 PYCARDQ9ULZ3 195 aa14.49□□□□□ -0.09
LDB3-202ENST00000361373 KCNH4Q9UQ05 1017 aa14.49□□□□□ -0.09
LDB3-202ENST00000361373 CTNND1O60716 968 aaKnown RBP14.49□□□□□ -0.09
LDB3-202ENST00000361373 TDP2O95551 362 aa14.49□□□□□ -0.09
LDB3-202ENST00000361373 PNMA8AQ86V59 439 aaPredicted RBP14.49□□□□□ -0.09
LDB3-202ENST00000361373 STAG2Q8N3U4 1231 aa14.49□□□□□ -0.09
LDB3-202ENST00000361373 TTC13Q8NBP0 860 aa14.49□□□□□ -0.09
LDB3-202ENST00000361373 PRPF31Q8WWY3 499 aaKnown RBP14.49□□□□□ -0.09
LDB3-202ENST00000361373 DGAT1O75907 488 aa14.49□□□□□ -0.09
LDB3-202ENST00000361373 ACTN1P12814 892 aa14.49□□□□□ -0.09
LDB3-202ENST00000361373 PRCPP42785 496 aa14.49□□□□□ -0.09
LDB3-202ENST00000361373 VAMP7P51809 220 aa14.49□□□□□ -0.09
LDB3-202ENST00000361373 KCNH2Q12809 1159 aa14.49□□□□□ -0.09
LDB3-202ENST00000361373 TRIM72Q6ZMU5 477 aa14.49□□□□□ -0.09
LDB3-202ENST00000361373 STOX1Q6ZVD7 989 aa14.49□□□□□ -0.09
LDB3-202ENST00000361373 RBM41Q96IZ5 413 aaKnown RBP14.49□□□□□ -0.09
LDB3-202ENST00000361373 CFAP57Q96MR6 1250 aa14.49□□□□□ -0.09
LDB3-202ENST00000361373 POLR3FQ9H1D9 316 aaPredicted RBP14.49□□□□□ -0.09
LDB3-202ENST00000361373 POTEFA5A3E0 1075 aa14.49□□□□□ -0.09
LDB3-202ENST00000361373 HEXIM1O94992 359 aaKnown RBP14.49□□□□□ -0.09
LDB3-202ENST00000361373 CPP00450 1065 aa14.49□□□□□ -0.09
LDB3-202ENST00000361373 POTEIP0CG38 1075 aa14.49□□□□□ -0.09
LDB3-202ENST00000361373 DARS2Q6PI48 645 aaKnown RBP14.49□□□□□ -0.09
LDB3-202ENST00000361373 POTEGQ6S5H5 508 aa14.49□□□□□ -0.09
LDB3-202ENST00000361373 POTEEQ6S8J3 1075 aa14.49□□□□□ -0.09
LDB3-202ENST00000361373 CLEC17AQ6ZS10 378 aa14.49□□□□□ -0.09
LDB3-202ENST00000361373 SCYL1Q96KG9 808 aa14.49□□□□□ -0.09
LDB3-202ENST00000361373 STAT5BP51692 787 aa14.48□□□□□ -0.09
LDB3-202ENST00000361373 ARPP19P56211 112 aa14.48□□□□□ -0.09
LDB3-202ENST00000361373 SCARA5Q6ZMJ2 495 aa14.48□□□□□ -0.09
LDB3-202ENST00000361373 PHF20Q9BVI0 1012 aa14.48□□□□□ -0.09
LDB3-202ENST00000361373 VCX3BQ9H321 246 aa14.48□□□□□ -0.09
LDB3-202ENST00000361373 PFASO15067 1338 aa14.48□□□□□ -0.09
LDB3-202ENST00000361373 SCP2P22307 547 aa14.48□□□□□ -0.09
LDB3-202ENST00000361373 TTC31Q49AM3 519 aaPredicted RBP14.48□□□□□ -0.09
LDB3-202ENST00000361373 ARHGEF2Q92974 986 aaKnown RBP14.48□□□□□ -0.09
LDB3-202ENST00000361373 TRIM62Q9BVG3 475 aa14.48□□□□□ -0.09
LDB3-202ENST00000361373 PDXKO00764 312 aa14.48□□□□□ -0.09
LDB3-202ENST00000361373 ZNF189O75820 626 aaPredicted RBP14.48□□□□□ -0.09
LDB3-202ENST00000361373 S100BP04271 92 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms