RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 SLIT3O75094 1523 aa15□□□□□ -0.01
CTR9-201ENST00000361367 A6NJR5 290 aa15□□□□□ -0.01
CTR9-201ENST00000361367 MFAP3LO75121 409 aa15□□□□□ -0.01
CTR9-201ENST00000361367 SHMT1P34896 483 aa15□□□□□ -0.01
CTR9-201ENST00000361367 KIF11P52732 1056 aa15□□□□□ -0.01
CTR9-201ENST00000361367 IRX5P78411 483 aaPredicted RBP15□□□□□ -0.01
CTR9-201ENST00000361367 KAZNQ674X7 775 aa15□□□□□ -0.01
CTR9-201ENST00000361367 XRRA1Q6P2D8 792 aa15□□□□□ -0.01
CTR9-201ENST00000361367 ALKBH5Q6P6C2 394 aaKnown RBP15□□□□□ -0.01
CTR9-201ENST00000361367 ARMCX2Q7L311 632 aa15□□□□□ -0.01
CTR9-201ENST00000361367 SCFD2Q8WU76 684 aa15□□□□□ -0.01
CTR9-201ENST00000361367 HAUS1Q96CS2 278 aa15□□□□□ -0.01
CTR9-201ENST00000361367 SAAL1Q96ER3 474 aa15□□□□□ -0.01
CTR9-201ENST00000361367 TAAR1Q96RJ0 339 aa15□□□□□ -0.01
CTR9-201ENST00000361367 DDX4Q9NQI0 724 aaKnown RBP15□□□□□ -0.01
CTR9-201ENST00000361367 NFAT5O94916 1531 aa15□□□□□ -0.01
CTR9-201ENST00000361367 ENC1O14682 589 aa15□□□□□ -0.01
CTR9-201ENST00000361367 C6orf222P0C671 652 aaPredicted RBP15□□□□□ -0.01
CTR9-201ENST00000361367 ATP5DP30049 168 aa15□□□□□ -0.01
CTR9-201ENST00000361367 NMT1P30419 496 aaKnown RBP15□□□□□ -0.01
CTR9-201ENST00000361367 DPF2Q92785 391 aa15□□□□□ -0.01
CTR9-201ENST00000361367 IDI2Q9BXS1 227 aa15□□□□□ -0.01
CTR9-201ENST00000361367 KCNH7Q9NS40 1196 aa15□□□□□ -0.01
CTR9-201ENST00000361367 NDC80O14777 642 aa14.99□□□□□ -0.01
CTR9-201ENST00000361367 GTF2A2P52657 109 aa14.99□□□□□ -0.01
CTR9-201ENST00000361367 ZNF394Q53GI3 561 aa14.99□□□□□ -0.01
CTR9-201ENST00000361367 GPC2Q8N158 579 aa14.99□□□□□ -0.01
CTR9-201ENST00000361367 SMARCAD1Q9H4L7 1026 aa14.99□□□□□ -0.01
CTR9-201ENST00000361367 GH1P01241 217 aa14.99□□□□□ -0.01
CTR9-201ENST00000361367 VAMP7P51809 220 aa14.99□□□□□ -0.01
CTR9-201ENST00000361367 GBA2Q9HCG7 927 aaPredicted RBP14.99□□□□□ -0.01
CTR9-201ENST00000361367 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.99□□□□□ -0.01
CTR9-201ENST00000361367 EFNA5P52803 228 aa14.99□□□□□ -0.01
CTR9-201ENST00000361367 OR6B2Q6IFH4 312 aa14.99□□□□□ -0.01
CTR9-201ENST00000361367 C15orf52Q6ZUT6 534 aaKnown RBP14.99□□□□□ -0.01
CTR9-201ENST00000361367 FAM76AQ8TAV0 307 aa14.99□□□□□ -0.01
CTR9-201ENST00000361367 FHDC1Q9C0D6 1143 aaPredicted RBP14.99□□□□□ -0.01
CTR9-201ENST00000361367 PPANQ9NQ55 473 aaKnown RBP14.99□□□□□ -0.01
CTR9-201ENST00000361367 ZNF148Q9UQR1 794 aa14.99□□□□□ -0.01
CTR9-201ENST00000361367 NME8Q8N427 588 aa14.99□□□□□ -0.01
CTR9-201ENST00000361367 DAGLBQ8NCG7 672 aa14.99□□□□□ -0.01
CTR9-201ENST00000361367 GRK7Q8WTQ7 553 aa14.99□□□□□ -0.01
CTR9-201ENST00000361367 HPS3Q969F9 1004 aa14.99□□□□□ -0.01
CTR9-201ENST00000361367 ODF2LQ9ULJ1 636 aa14.99□□□□□ -0.01
CTR9-201ENST00000361367 KCNH4Q9UQ05 1017 aa14.99□□□□□ -0.01
CTR9-201ENST00000361367 IFT172Q9UG01 1749 aa14.98□□□□□ -0.01
CTR9-201ENST00000361367 NPHP3-ACAD11A0A0J9YXS1 232 aa14.98□□□□□ -0.01
CTR9-201ENST00000361367 VCAM1P19320 739 aa14.98□□□□□ -0.01
CTR9-201ENST00000361367 HPDP32754 393 aaPredicted RBP14.98□□□□□ -0.01
CTR9-201ENST00000361367 ADCY8P40145 1251 aa14.98□□□□□ -0.01
CTR9-201ENST00000361367 FKBP1AP62942 108 aaKnown RBP14.98□□□□□ -0.01
CTR9-201ENST00000361367 ZBTB16Q05516 673 aa14.98□□□□□ -0.01
CTR9-201ENST00000361367 CSPG5O95196 566 aa14.98□□□□□ -0.01
CTR9-201ENST00000361367 PPFIA1Q13136 1202 aa14.98□□□□□ -0.01
CTR9-201ENST00000361367 ZNF699Q32M78 642 aa14.98□□□□□ -0.01
CTR9-201ENST00000361367 MAP1SQ66K74 1059 aaPredicted RBP14.98□□□□□ -0.01
CTR9-201ENST00000361367 SMAP1Q8IYB5 467 aaPredicted RBP14.98□□□□□ -0.01
CTR9-201ENST00000361367 GMCL1P1Q8NEA9 526 aa14.98□□□□□ -0.01
CTR9-201ENST00000361367 TIPINQ9BVW5 301 aa14.98□□□□□ -0.01
CTR9-201ENST00000361367 IFT122Q9HBG6 1241 aa14.98□□□□□ -0.01
CTR9-201ENST00000361367 PPP1R9AQ9ULJ8 1098 aa14.98□□□□□ -0.01
CTR9-201ENST00000361367 CAPN2P17655 700 aa14.98□□□□□ -0.01
CTR9-201ENST00000361367 GABPAQ06546 454 aa14.98□□□□□ -0.01
CTR9-201ENST00000361367 C10orf76Q5T2E6 689 aa14.98□□□□□ -0.01
CTR9-201ENST00000361367 SIX6OS1Q8N1H7 587 aa14.98□□□□□ -0.01
CTR9-201ENST00000361367 ATP2C2O75185 946 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 GPC3P51654 580 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 ITIH3Q06033 890 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 SREBF2Q12772 1141 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 POTEAQ6S8J7 498 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 CPLX4Q7Z7G2 160 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 TMEM143Q96AN5 459 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 GDAP1L1Q96MZ0 367 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 CEP72Q9P209 647 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 AGO2Q9UKV8 859 aaKnown RBP14.97□□□□□ -0.01
CTR9-201ENST00000361367 RPA1P27694 616 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 NUDT12Q9BQG2 462 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 REEP2Q9BRK0 252 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 SUCLA2Q9P2R7 463 aaPredicted RBP14.97□□□□□ -0.01
CTR9-201ENST00000361367 CDC23Q9UJX2 597 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 KNDC1Q76NI1 1749 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 PDXKO00764 312 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 RUFY4Q6ZNE9 571 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 PHLDB2Q86SQ0 1253 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 BEST2Q8NFU1 509 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 MOV10L1Q9BXT6 1211 aaKnown RBP14.97□□□□□ -0.01
CTR9-201ENST00000361367 RBAKQ9NYW8 714 aaPredicted RBP14.97□□□□□ -0.01
CTR9-201ENST00000361367 PIK3C2AO00443 1686 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 TBC1D8O95759 1140 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 TRIM49P0CI25 452 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 TRIM49CP0CI26 452 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 ERCC6LQ2NKX8 1250 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 KRT39Q6A163 491 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 CROCCP2Q86T23 111 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 C7orf25Q9BPX7 421 aa14.97□□□□□ -0.01
CTR9-201ENST00000361367 GOLGA6BA6NDN3 693 aa14.96□□□□□ -0.01
CTR9-201ENST00000361367 MYMKA6NI61 221 aa14.96□□□□□ -0.01
CTR9-201ENST00000361367 PRKCEQ02156 737 aa14.96□□□□□ -0.01
CTR9-201ENST00000361367 DPH5Q9H2P9 285 aa14.96□□□□□ -0.01
CTR9-201ENST00000361367 VPS37BQ9H9H4 285 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms