RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 DENND6AQ8IWF6 608 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 KIFC1Q9BW19 673 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 DCTN4Q9UJW0 460 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 GCFC2P16383 781 aaKnown RBP8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 CXCR5P32302 372 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 MFN1Q8IWA4 741 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 GJA10Q969M2 543 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 KRCC1Q9NPI7 259 aaPredicted RBP8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 ECM2O94769 699 aaPredicted RBP8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 KRT40Q6A162 431 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 ELMSAN1Q6PJG2 1045 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 LRRC39Q96DD0 335 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 PDP2Q9P2J9 529 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 CXorf56Q9H5V9 222 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 NFU1Q9UMS0 254 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 NCOA1Q15788 1441 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 CCDC188H7C350 402 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 RNF219Q5W0B1 726 aaPredicted RBP8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 CASS4Q9NQ75 786 aa8.95□□□□□ -0.98
NCKAP1-202ENST00000361354 TESPA1A2RU30 521 aaPredicted RBP8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 GAP43P17677 238 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 KLHL20Q9Y2M5 609 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 ABI1Q8IZP0 508 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 RNF139Q8WU17 664 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 RUBCNQ92622 972 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 ERAP1Q9NZ08 941 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 LAD1O00515 517 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 TSPAN9O75954 239 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 LAMB3Q13751 1172 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 DNAL1Q4LDG9 190 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 ITGAXP20702 1163 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 RABGAP1LQ5R372 815 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 SAYSD1Q9NPB0 183 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 GADD45BO75293 160 aaPredicted RBP8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 NSMFQ6X4W1 530 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 INPP5DQ92835 1189 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 TINF2Q9BSI4 451 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 LMBRD1Q9NUN5 540 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 HPCAP84074 193 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 RBM17Q96I25 401 aaKnown RBP8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 CARD9Q9H257 536 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 EIF6P56537 245 aaKnown RBP8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 XKR9Q5GH70 373 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 RAB42Q8N4Z0 105 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 FAM45AQ8TCE6 357 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 MCRS1Q96EZ8 462 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 GMNCA6NCL1 334 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 ARFIP2P53365 341 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 PUDPQ08623 228 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 DMPKQ09013 629 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 TERF2Q15554 542 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 MAPRE1Q15691 268 aaKnown RBP8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 TPTE2Q6XPS3 522 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 DDI1Q8WTU0 396 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 APOA5Q6Q788 366 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 APPBP2Q92624 585 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 SHROOM1Q2M3G4 852 aaPredicted RBP8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 VPS54Q9P1Q0 977 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 TBKBP1A7MCY6 615 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 MYL1P05976 194 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 BBS7Q8IWZ6 715 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 RHOT2Q8IXI1 618 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 CYP26B1Q9NR63 512 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 USP40Q9NVE5 1235 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 SNTNA6NMZ2 147 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 MAP3K1Q13233 1512 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 KCNA2P16389 499 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 NUP107P57740 925 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 C16orf89Q6UX73 402 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 GANCQ8TET4 914 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 CCDC127Q96BQ5 260 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 EXOSC4Q9NPD3 245 aaKnown RBP8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 IRS4O14654 1257 aaPredicted RBP8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 FGGP02679 453 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 ELF1P32519 619 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 HNRNPH2P55795 449 aaKnown RBP8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 FAM47EQ6ZV65 393 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 DDIASQ8IXT1 998 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 TRPC7Q9HCX4 862 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 PCDHA12Q9UN75 941 aa8.94□□□□□ -0.98
NCKAP1-202ENST00000361354 SAC3D1A6NKF1 404 aa8.93□□□□□ -0.98
NCKAP1-202ENST00000361354 PGM1P36871 562 aa8.93□□□□□ -0.98
NCKAP1-202ENST00000361354 SRLQ86TD4 932 aa8.93□□□□□ -0.98
NCKAP1-202ENST00000361354 LINS1Q8NG48 757 aa8.93□□□□□ -0.98
NCKAP1-202ENST00000361354 WWP1Q9H0M0 922 aa8.93□□□□□ -0.98
NCKAP1-202ENST00000361354 SNPHO15079 494 aa8.93□□□□□ -0.98
NCKAP1-202ENST00000361354 NLRP14Q86W24 1093 aa8.93□□□□□ -0.98
NCKAP1-202ENST00000361354 CCNYL1Q8N7R7 359 aa8.93□□□□□ -0.98
NCKAP1-202ENST00000361354 MICU2Q8IYU8 434 aa8.93□□□□□ -0.98
NCKAP1-202ENST00000361354 DCTPP1Q9H773 170 aa8.93□□□□□ -0.98
NCKAP1-202ENST00000361354 AKAP10O43572 662 aa8.93□□□□□ -0.98
NCKAP1-202ENST00000361354 PSMC2P35998 433 aaKnown RBP8.93□□□□□ -0.98
NCKAP1-202ENST00000361354 ACTN3Q08043 901 aaPredicted RBP8.93□□□□□ -0.98
NCKAP1-202ENST00000361354 MMRN1Q13201 1228 aa8.93□□□□□ -0.98
NCKAP1-202ENST00000361354 MAML3Q96JK9 1138 aa8.93□□□□□ -0.98
NCKAP1-202ENST00000361354 MLXIPQ9HAP2 919 aa8.93□□□□□ -0.98
NCKAP1-202ENST00000361354 HPCAL4Q9UM19 191 aa8.93□□□□□ -0.98
NCKAP1-202ENST00000361354 INPP5FQ9Y2H2 1132 aa8.93□□□□□ -0.98
NCKAP1-202ENST00000361354 ARMC3Q5W041 872 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms