RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 TMEM67Q5HYA8 995 aa8.5□□□□□ -1.05
CCL28-201ENST00000361115 NT5DC1Q5TFE4 455 aa8.5□□□□□ -1.05
CCL28-201ENST00000361115 KLHL10Q6JEL2 608 aa8.5□□□□□ -1.05
CCL28-201ENST00000361115 MIEF2Q96C03 454 aa8.5□□□□□ -1.05
CCL28-201ENST00000361115 CCDC97Q96F63 343 aaPredicted RBP8.5□□□□□ -1.05
CCL28-201ENST00000361115 ALG1Q9BT22 464 aa8.5□□□□□ -1.05
CCL28-201ENST00000361115 LRFN3Q9BTN0 628 aa8.5□□□□□ -1.05
CCL28-201ENST00000361115 HELLSQ9NRZ9 838 aa8.5□□□□□ -1.05
CCL28-201ENST00000361115 ZMYM6O95789 1325 aa8.5□□□□□ -1.05
CCL28-201ENST00000361115 MYO5AQ9Y4I1 1855 aaKnown RBP8.5□□□□□ -1.05
CCL28-201ENST00000361115 IGKV6D-41A0A0C4DH26 115 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 PDE2AO00408 941 aaPredicted RBP8.49□□□□□ -1.05
CCL28-201ENST00000361115 RXRAP19793 462 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 PTPN5P54829 565 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 PDCLQ13371 301 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 TMEM132BQ14DG7 1078 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 KCNA10Q16322 511 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 C12orf60Q5U649 245 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 PPP2R2DQ66LE6 453 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 ARL8AQ96BM9 186 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 MTG1Q9BT17 334 aaPredicted RBP8.49□□□□□ -1.05
CCL28-201ENST00000361115 KATNAL1Q9BW62 490 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 SLC38A10Q9HBR0 1119 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 GNEQ9Y223 722 aaKnown RBP8.49□□□□□ -1.05
CCL28-201ENST00000361115 MYH4Q9Y623 1939 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 ATN1P54259 1190 aaPredicted RBP8.49□□□□□ -1.05
CCL28-201ENST00000361115 NEDD9Q14511 834 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 CNKSR3Q6P9H4 555 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 FBXL16Q8N461 479 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 DNERQ8NFT8 737 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 N4BP2L2Q92802 583 aaPredicted RBP8.49□□□□□ -1.05
CCL28-201ENST00000361115 FAXDC2Q96IV6 333 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 CHP1Q99653 195 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 KATNBL1Q9H079 304 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 HIPK3Q9H422 1215 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 MYO1AQ9UBC5 1043 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 MTCH2Q9Y6C9 303 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 MYH10P35580 1976 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 WDR19Q8NEZ3 1342 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 TARSL2A2RTX5 802 aaKnown RBP8.49□□□□□ -1.05
CCL28-201ENST00000361115 C19orf67A6NJJ6 358 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 NDUFAB1O14561 156 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 ZNF185O15231 689 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 FOXP2O15409 715 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 CXCL10P02778 98 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 CASP1P29466 404 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 ERVK-21P61565 698 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 ACTN3Q08043 901 aaPredicted RBP8.49□□□□□ -1.05
CCL28-201ENST00000361115 PREPLQ4J6C6 727 aaPredicted RBP8.49□□□□□ -1.05
CCL28-201ENST00000361115 TTMPQ5BVD1 217 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 WDR78Q5VTH9 848 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 TMTC1Q8IUR5 882 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 CNGA4Q8IV77 575 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 MB21D2Q8IYB1 491 aaPredicted RBP8.49□□□□□ -1.05
CCL28-201ENST00000361115 FAM133AQ8N9E0 248 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 AENQ8WTP8 325 aaKnown RBP8.49□□□□□ -1.05
CCL28-201ENST00000361115 PHKBQ93100 1093 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.49□□□□□ -1.05
CCL28-201ENST00000361115 ABHD10Q9NUJ1 306 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 PAG1Q9NWQ8 432 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 DACH1Q9UI36 760 aa8.49□□□□□ -1.05
CCL28-201ENST00000361115 CHUKO15111 745 aa8.48□□□□□ -1.05
CCL28-201ENST00000361115 MEFVO15553 781 aaPredicted RBP8.48□□□□□ -1.05
CCL28-201ENST00000361115 SNAI1O95863 264 aaPredicted RBP8.48□□□□□ -1.05
CCL28-201ENST00000361115 RB1P06400 928 aa8.48□□□□□ -1.05
CCL28-201ENST00000361115 PAX7P23759 505 aa8.48□□□□□ -1.05
CCL28-201ENST00000361115 MCM3P25205 808 aa8.48□□□□□ -1.05
CCL28-201ENST00000361115 CCT6AP40227 531 aaKnown RBP8.48□□□□□ -1.05
CCL28-201ENST00000361115 MRPS25P82663 173 aaKnown RBP8.48□□□□□ -1.05
CCL28-201ENST00000361115 C2orf54Q08AI8 447 aa8.48□□□□□ -1.05
CCL28-201ENST00000361115 MTA1Q13330 715 aa8.48□□□□□ -1.05
CCL28-201ENST00000361115 MYBPC2Q14324 1141 aa8.48□□□□□ -1.05
CCL28-201ENST00000361115 CDKAL1Q5VV42 579 aa8.48□□□□□ -1.05
CCL28-201ENST00000361115 USP49Q70CQ1 688 aa8.48□□□□□ -1.05
CCL28-201ENST00000361115 SND1Q7KZF4 910 aaKnown RBP eCLIP8.48□□□□□ -1.05
CCL28-201ENST00000361115 SMYD4Q8IYR2 804 aaPredicted RBP8.48□□□□□ -1.05
CCL28-201ENST00000361115 DCP1AQ9NPI6 582 aaPredicted RBP8.48□□□□□ -1.05
CCL28-201ENST00000361115 MPHOSPH10O00566 681 aaKnown RBP8.48□□□□□ -1.05
CCL28-201ENST00000361115 PQBP1O60828 265 aaKnown RBP8.48□□□□□ -1.05
CCL28-201ENST00000361115 ASGR1P07306 291 aa8.48□□□□□ -1.05
CCL28-201ENST00000361115 TRDNQ13061 729 aa8.48□□□□□ -1.05
CCL28-201ENST00000361115 SEPT2Q15019 361 aa8.48□□□□□ -1.05
CCL28-201ENST00000361115 SPATA1Q5VX52 437 aa8.48□□□□□ -1.05
CCL28-201ENST00000361115 SP7Q8TDD2 431 aaPredicted RBP8.48□□□□□ -1.05
CCL28-201ENST00000361115 HDAC7Q8WUI4 952 aa8.48□□□□□ -1.05
CCL28-201ENST00000361115 DCAF4Q8WV16 495 aa8.48□□□□□ -1.05
CCL28-201ENST00000361115 APBB2Q92870 758 aa8.48□□□□□ -1.05
CCL28-201ENST00000361115 EMID1Q96A84 441 aaPredicted RBP8.48□□□□□ -1.05
CCL28-201ENST00000361115 TSPAN18Q96SJ8 248 aa8.48□□□□□ -1.05
CCL28-201ENST00000361115 NKX2-4Q9H2Z4 354 aa8.48□□□□□ -1.05
CCL28-201ENST00000361115 PIH1D3Q9NQM4 214 aaKnown RBP8.48□□□□□ -1.05
CCL28-201ENST00000361115 SAR1BQ9Y6B6 198 aa8.48□□□□□ -1.05
CCL28-201ENST00000361115 TCRBV5S4A2TA0A5A2 114 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 KIAA0754O94854 1291 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 ATP2A2P16615 1042 aaKnown RBP8.47□□□□□ -1.05
CCL28-201ENST00000361115 RFX1P22670 979 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 ERCC5P28715 1186 aaPredicted RBP8.47□□□□□ -1.05
CCL28-201ENST00000361115 NOVP48745 357 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 ATP1A2P50993 1020 aa8.47□□□□□ -1.05
CCL28-201ENST00000361115 JAG1P78504 1218 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms