RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 HS2ST1Q7LGA3 356 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 CTAGE6Q86UF2 777 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 CTAGE4Q8IX94 777 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 TRIM58Q8NG06 486 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 ATG4CQ96DT6 458 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 PDCD2LQ9BRP1 358 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 TIPINQ9BVW5 301 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 MAF1Q9H063 256 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 RNF146Q9NTX7 359 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 AIPL1Q9NZN9 384 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 FBXL5Q9UKA1 691 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 TFR2Q9UP52 801 aa16.34■□□□□ 0.21
GABPB1-202ENST00000359031 SFI1A8K8P3 1242 aa16.33■□□□□ 0.2
GABPB1-202ENST00000359031 HIP1RO75146 1068 aa16.33■□□□□ 0.2
GABPB1-202ENST00000359031 TACC1O75410 805 aa16.33■□□□□ 0.2
GABPB1-202ENST00000359031 PPP1R37O75864 691 aa16.33■□□□□ 0.2
GABPB1-202ENST00000359031 SFNP31947 248 aa16.33■□□□□ 0.2
GABPB1-202ENST00000359031 PSMC2P35998 433 aaKnown RBP16.33■□□□□ 0.2
GABPB1-202ENST00000359031 QARSP47897 775 aaKnown RBP16.33■□□□□ 0.2
GABPB1-202ENST00000359031 CKAP4Q07065 602 aaKnown RBP16.33■□□□□ 0.2
GABPB1-202ENST00000359031 MAPK7Q13164 816 aa16.33■□□□□ 0.2
GABPB1-202ENST00000359031 ASIC2Q16515 512 aa16.33■□□□□ 0.2
GABPB1-202ENST00000359031 DCAF17Q5H9S7 520 aaPredicted RBP16.33■□□□□ 0.2
GABPB1-202ENST00000359031 ODR4Q5SWX8 454 aa16.33■□□□□ 0.2
GABPB1-202ENST00000359031 NOL9Q5SY16 702 aaKnown RBP16.33■□□□□ 0.2
GABPB1-202ENST00000359031 GPC2Q8N158 579 aa16.33■□□□□ 0.2
GABPB1-202ENST00000359031 REPS2Q8NFH8 660 aa16.33■□□□□ 0.2
GABPB1-202ENST00000359031 RMDN3Q96TC7 470 aa16.33■□□□□ 0.2
GABPB1-202ENST00000359031 CRACR2AQ9BSW2 395 aa16.33■□□□□ 0.2
GABPB1-202ENST00000359031 GPRC5DQ9NZD1 345 aa16.33■□□□□ 0.2
GABPB1-202ENST00000359031 PKD2L1Q9P0L9 805 aa16.33■□□□□ 0.2
GABPB1-202ENST00000359031 TCEAL9Q9UHQ7 104 aa16.33■□□□□ 0.2
GABPB1-202ENST00000359031 PUF60Q9UHX1 559 aaKnown RBP16.33■□□□□ 0.2
GABPB1-202ENST00000359031 SAR1BQ9Y6B6 198 aa16.33■□□□□ 0.2
GABPB1-202ENST00000359031 SSC5DA1L4H1 1573 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 PAPPA2Q9BXP8 1791 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 TLR2O60603 784 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 ATP1A1P05023 1023 aaKnown RBP16.32■□□□□ 0.2
GABPB1-202ENST00000359031 MAGEA1P43355 309 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 KRT76Q01546 638 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 KCNA1Q09470 495 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 RAPGEF1Q13905 1077 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 MYBPC2Q14324 1141 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 EXOC3L4Q17RC7 722 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 GLIPR1L2Q4G1C9 344 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 ARHGEF16Q5VV41 709 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 GBP6Q6ZN66 633 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 FAM186BQ8IYM0 893 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 RDM1Q8NG50 284 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 SLC35C1Q96A29 364 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 BORCS6Q96GS4 357 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 STRA6Q9BX79 667 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 GBP3Q9H0R5 595 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 BCAS3Q9H6U6 928 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 ZNF446Q9NWS9 450 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 ADAMTS5Q9UNA0 930 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 ZHX2Q9Y6X8 837 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 ARID2Q68CP9 1835 aa16.32■□□□□ 0.2
GABPB1-202ENST00000359031 MACROD2A1Z1Q3 448 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 CCDC85CA6NKD9 419 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 CLIC2O15247 247 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 SLC34A2O95436 690 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 ANXA13P27216 316 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 CCND2P30279 289 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 DSG3P32926 999 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 CASP4P49662 377 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 RARRES1P49788 294 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 ZC2HC1CQ53FD0 456 aaPredicted RBP16.31■□□□□ 0.2
GABPB1-202ENST00000359031 KLHDC7AQ5VTJ3 777 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 DPY19L2P1Q6NXN4 242 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 NSMFQ6X4W1 530 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 SLC9A9Q8IVB4 645 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 DAW1Q8N136 415 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 MSANTD4Q8NCY6 345 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 TRPM4Q8TD43 1214 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 ZKSCAN4Q969J2 545 aaPredicted RBP16.31■□□□□ 0.2
GABPB1-202ENST00000359031 RPGRIP1Q96KN7 1286 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 ALS2CR12Q96Q35 445 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 AGPAT3Q9NRZ7 376 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 DMAC2Q9NW81 257 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 FAM53CQ9NYF3 392 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 LARSQ9P2J5 1176 aaKnown RBP16.31■□□□□ 0.2
GABPB1-202ENST00000359031 SAMM50Q9Y512 469 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 MYPNQ86TC9 1320 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 WDR81Q562E7 1941 aa16.31■□□□□ 0.2
GABPB1-202ENST00000359031 WDR64B1ANS9 1081 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 ATP2A1O14983 1001 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 ATP8B1O43520 1251 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 ZRANB2O95218 330 aaKnown RBP eCLIP16.3■□□□□ 0.2
GABPB1-202ENST00000359031 MYCLP12524 364 aaPredicted RBP16.3■□□□□ 0.2
GABPB1-202ENST00000359031 ZSCAN20P17040 1043 aaPredicted RBP16.3■□□□□ 0.2
GABPB1-202ENST00000359031 PON1P27169 355 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 BMS1Q14692 1282 aaKnown RBP16.3■□□□□ 0.2
GABPB1-202ENST00000359031 BRD3Q15059 726 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 PPP2R5AQ15172 486 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 TCERG1LQ5VWI1 586 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 C4orf19Q8IY42 314 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 GPRASP2Q96D09 838 aa16.3■□□□□ 0.2
GABPB1-202ENST00000359031 CCDC43Q96MW1 224 aaKnown RBP16.3■□□□□ 0.2
GABPB1-202ENST00000359031 POLD4Q9HCU8 107 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms