RNA–Protein interactions for RNA: ENST00000358545.6

TNFSF11-202, Transcript of TNF superfamily member 11, humanhuman

TSL 1 (best) BASIC

Gene TNFSF11, Length 1,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-202ENST00000358545 H0Y858 1186 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 GJB5O95377 273 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 SUPT20HL2P0C7V6 817 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 CYP2D6P10635 497 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 CD33P20138 364 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 CNTN2Q02246 1040 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 PKN1Q16512 942 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 FAM47CQ5HY64 1035 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 FAM117BQ6P1L5 589 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 Q6ZNB5 142 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 CERS3Q8IU89 383 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 CPXCR1Q8N123 301 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 CCDC155Q8N6L0 562 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 SSH1Q8WYL5 1049 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 KIFC2Q96AC6 838 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 MRPL38Q96DV4 380 aaKnown RBP7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 DYNLL2Q96FJ2 89 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 SEC16BQ96JE7 1060 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 NSUN5Q96P11 429 aaKnown RBP7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 CRBNQ96SW2 442 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 NUP88Q99567 741 aaPredicted RBP7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 POP1Q99575 1024 aaKnown RBP7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 MEIS3Q99687 375 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 SLF1Q9BQI6 1058 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 DBNDD2Q9BQY9 259 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 CEP44Q9C0F1 390 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 TLR9Q9NR96 1032 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 MCM9Q9NXL9 1143 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 CEP250Q9BV73 2442 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 CHD6Q8TD26 2715 aa7.53□□□□□ -1.2
TNFSF11-202ENST00000358545 MED19A0JLT2 244 aaPredicted RBP7.52□□□□□ -1.2
TNFSF11-202ENST00000358545 PRR23AA6NEV1 266 aa7.52□□□□□ -1.2
TNFSF11-202ENST00000358545 EEF2P13639 858 aaKnown RBP7.52□□□□□ -1.2
TNFSF11-202ENST00000358545 NRLP54845 237 aa7.52□□□□□ -1.2
TNFSF11-202ENST00000358545 SMAD2Q15796 467 aaKnown RBP7.52□□□□□ -1.2
TNFSF11-202ENST00000358545 PTPROQ16827 1216 aa7.52□□□□□ -1.2
TNFSF11-202ENST00000358545 CCDC158Q5M9N0 1113 aa7.52□□□□□ -1.2
TNFSF11-202ENST00000358545 EEPD1Q7L9B9 569 aa7.52□□□□□ -1.2
TNFSF11-202ENST00000358545 RPAINQ86UA6 219 aa7.52□□□□□ -1.2
TNFSF11-202ENST00000358545 FBXO16Q8IX29 292 aaPredicted RBP7.52□□□□□ -1.2
TNFSF11-202ENST00000358545 GMCL1Q96IK5 515 aa7.52□□□□□ -1.2
TNFSF11-202ENST00000358545 RAD9AQ99638 391 aa7.52□□□□□ -1.2
TNFSF11-202ENST00000358545 PDGFCQ9NRA1 345 aa7.52□□□□□ -1.2
TNFSF11-202ENST00000358545 ATXN7L1Q9ULK2 861 aaPredicted RBP7.52□□□□□ -1.2
TNFSF11-202ENST00000358545 MYH7P12883 1935 aa7.52□□□□□ -1.21
TNFSF11-202ENST00000358545 CFAP47Q6ZTR5 3102 aa7.52□□□□□ -1.21
TNFSF11-202ENST00000358545 MBTPS2O43462 519 aa7.52□□□□□ -1.21
TNFSF11-202ENST00000358545 MYL3P08590 195 aa7.52□□□□□ -1.21
TNFSF11-202ENST00000358545 ITPKAP23677 461 aa7.52□□□□□ -1.21
TNFSF11-202ENST00000358545 SPRED3Q2MJR0 410 aa7.52□□□□□ -1.21
TNFSF11-202ENST00000358545 FBXL19Q6PCT2 694 aa7.52□□□□□ -1.21
TNFSF11-202ENST00000358545 PHC3Q8NDX5 983 aa7.52□□□□□ -1.21
TNFSF11-202ENST00000358545 NXPE3Q969Y0 559 aa7.52□□□□□ -1.21
TNFSF11-202ENST00000358545 EAF1Q96JC9 268 aaPredicted RBP7.52□□□□□ -1.21
TNFSF11-202ENST00000358545 FSD1Q9BTV5 496 aa7.52□□□□□ -1.21
TNFSF11-202ENST00000358545 IRF2BPLQ9H1B7 796 aa7.52□□□□□ -1.21
TNFSF11-202ENST00000358545 RAVER2Q9HCJ3 691 aaKnown RBP7.52□□□□□ -1.21
TNFSF11-202ENST00000358545 HOMER2Q9NSB8 354 aa7.52□□□□□ -1.21
TNFSF11-202ENST00000358545 CTNNA3Q9UI47 895 aa7.52□□□□□ -1.21
TNFSF11-202ENST00000358545 MYO10Q9HD67 2058 aa7.52□□□□□ -1.21
TNFSF11-202ENST00000358545 A0A096LPE4 126 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 A0A1W2PPZ6 126 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 METTL12A8MUP2 240 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 PROB1E7EW31 1015 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 STXBP3O00186 592 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 CELA3AP09093 270 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 LTBRP36941 435 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 LIG3P49916 1009 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 ZXDAP98168 799 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 PURAQ00577 322 aaKnown RBP7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 DLX2Q07687 328 aaPredicted RBP7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 BFSP2Q13515 415 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 TCTN1Q2MV58 587 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 TNNI3KQ59H18 835 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 FAM133AQ8N9E0 248 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 TMEM102Q8N9M5 508 aaPredicted RBP7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 SDR42E1Q8WUS8 393 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 RHOVQ96L33 236 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 HHIPQ96QV1 700 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 RIOK1Q9BRS2 568 aaKnown RBP7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 BHLHE41Q9C0J9 482 aaPredicted RBP7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 NSUN3Q9H649 340 aaKnown RBP7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 ZSWIM4Q9H7M6 989 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 SWAP70Q9UH65 585 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 HDAC5Q9UQL6 1122 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 TLR6Q9Y2C9 796 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 CTDP1Q9Y5B0 961 aaPredicted RBP7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 FPGT-TNNI3KV9GXZ4 949 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 KIAA1671Q9BY89 1806 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 CHD8Q9HCK8 2581 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 ZFHX4Q86UP3 3567 aa7.51□□□□□ -1.21
TNFSF11-202ENST00000358545 ATRXP46100 2492 aa7.5□□□□□ -1.21
TNFSF11-202ENST00000358545 ASB14A6NK59 587 aa7.5□□□□□ -1.21
TNFSF11-202ENST00000358545 ATP2A1O14983 1001 aa7.5□□□□□ -1.21
TNFSF11-202ENST00000358545 SSBP05455 408 aaKnown RBP eCLIP7.5□□□□□ -1.21
TNFSF11-202ENST00000358545 AVPR2P30518 371 aa7.5□□□□□ -1.21
TNFSF11-202ENST00000358545 NASPP49321 788 aaPredicted RBP7.5□□□□□ -1.21
TNFSF11-202ENST00000358545 G3BP1Q13283 466 aaKnown RBP eCLIP7.5□□□□□ -1.21
TNFSF11-202ENST00000358545 GPM6BQ13491 265 aa7.5□□□□□ -1.21
TNFSF11-202ENST00000358545 MTX1Q13505 466 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 175.5 ms