RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 GYS1P13807 737 aa19.26■□□□□ 0.67
RTN4-204ENST00000357732 ADRA2BP18089 450 aa19.26■□□□□ 0.67
RTN4-204ENST00000357732 MNAT1P51948 309 aa19.26■□□□□ 0.67
RTN4-204ENST00000357732 SEC24CP53992 1094 aa19.26■□□□□ 0.67
RTN4-204ENST00000357732 ARHGAP4P98171 946 aa19.26■□□□□ 0.67
RTN4-204ENST00000357732 POU5F1Q01860 360 aaKnown RBP19.26■□□□□ 0.67
RTN4-204ENST00000357732 QRICH1Q2TAL8 776 aa19.26■□□□□ 0.67
RTN4-204ENST00000357732 MKL1Q969V6 931 aa19.26■□□□□ 0.67
RTN4-204ENST00000357732 POLR3CQ9BUI4 534 aaPredicted RBP19.26■□□□□ 0.67
RTN4-204ENST00000357732 AP1M1Q9BXS5 423 aa19.26■□□□□ 0.67
RTN4-204ENST00000357732 UBE4BO95155 1302 aa19.26■□□□□ 0.67
RTN4-204ENST00000357732 PPFIA2O75334 1257 aa19.26■□□□□ 0.67
RTN4-204ENST00000357732 SPATA31C1P0DKV0 1188 aa19.26■□□□□ 0.67
RTN4-204ENST00000357732 GBP1P32455 592 aa19.26■□□□□ 0.67
RTN4-204ENST00000357732 DCAF17Q5H9S7 520 aaPredicted RBP19.26■□□□□ 0.67
RTN4-204ENST00000357732 CCDC121Q6ZUS5 278 aa19.26■□□□□ 0.67
RTN4-204ENST00000357732 CROCCP2Q86T23 111 aa19.26■□□□□ 0.67
RTN4-204ENST00000357732 UBLCP1Q8WVY7 318 aaPredicted RBP19.26■□□□□ 0.67
RTN4-204ENST00000357732 NCAPGQ9BPX3 1015 aa19.26■□□□□ 0.67
RTN4-204ENST00000357732 USP17L15C9J2P7 530 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 USP17L13C9JLJ4 530 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 USP17L11C9JVI0 530 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 USP17L18D6R9N7 530 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 USP17L22D6RA61 530 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 USP17L17D6RBQ6 530 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 USP17L19D6RCP7 530 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 USP17L20D6RJB6 530 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 RIMBP2O15034 1052 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 TBCAO75347 108 aaKnown RBP19.25■□□□□ 0.67
RTN4-204ENST00000357732 RFX1P22670 979 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 CIITAP33076 1130 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 PTENP60484 403 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 USP17L24Q0WX57 530 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 USP17L6PQ6QN14 398 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 HOOK3Q86VS8 718 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 BORCS6Q96GS4 357 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 STK33Q9BYT3 514 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 AMACRQ9UHK6 382 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 GOLGA6L10A0A0M3HER8 536 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 FAM187AA6NFU0 413 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 F8VZ95 297 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 MEIS2O14770 477 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 DAPK3O43293 454 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 SOX5P35711 763 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 DRG2P55039 364 aaKnown RBP19.25■□□□□ 0.67
RTN4-204ENST00000357732 ODF2Q5BJF6 829 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 TXLNGYQ9BZA5 131 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 COA1Q9GZY4 146 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 NEUROG2Q9H2A3 272 aa19.25■□□□□ 0.67
RTN4-204ENST00000357732 PPANQ9NQ55 473 aaKnown RBP19.25■□□□□ 0.67
RTN4-204ENST00000357732 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.25■□□□□ 0.67
RTN4-204ENST00000357732 EYA4O95677 639 aa19.24■□□□□ 0.67
RTN4-204ENST00000357732 SLURP2P0DP57 97 aa19.24■□□□□ 0.67
RTN4-204ENST00000357732 HOXA10P31260 410 aaPredicted RBP19.24■□□□□ 0.67
RTN4-204ENST00000357732 PSMC2P35998 433 aaKnown RBP19.24■□□□□ 0.67
RTN4-204ENST00000357732 SREBF1P36956 1147 aa19.24■□□□□ 0.67
RTN4-204ENST00000357732 STAT3P40763 770 aa19.24■□□□□ 0.67
RTN4-204ENST00000357732 IFT88Q13099 833 aa19.24■□□□□ 0.67
RTN4-204ENST00000357732 PABPC4Q13310 644 aaKnown RBP eCLIP19.24■□□□□ 0.672e-7■■■□□ 16.8
RTN4-204ENST00000357732 DHX34Q14147 1143 aaKnown RBP19.24■□□□□ 0.67
RTN4-204ENST00000357732 RNF187Q5TA31 235 aaPredicted RBP19.24■□□□□ 0.67
RTN4-204ENST00000357732 TCERG1LQ5VWI1 586 aa19.24■□□□□ 0.67
RTN4-204ENST00000357732 KCTD1Q719H9 257 aa19.24■□□□□ 0.67
RTN4-204ENST00000357732 CENPHQ9H3R5 247 aa19.24■□□□□ 0.67
RTN4-204ENST00000357732 NUDT17P0C025 328 aa19.24■□□□□ 0.67
RTN4-204ENST00000357732 HSPA6P17066 643 aa19.24■□□□□ 0.67
RTN4-204ENST00000357732 GALCP54803 685 aa19.24■□□□□ 0.67
RTN4-204ENST00000357732 HADHBP55084 474 aaKnown RBP19.24■□□□□ 0.67
RTN4-204ENST00000357732 PPATQ06203 517 aa19.24■□□□□ 0.67
RTN4-204ENST00000357732 DDX42Q86XP3 938 aaKnown RBP eCLIP19.24■□□□□ 0.679e-7■■□□□ 12.1
RTN4-204ENST00000357732 CCDC50Q8IVM0 306 aa19.24■□□□□ 0.67
RTN4-204ENST00000357732 CCDC13Q8IYE1 715 aa19.24■□□□□ 0.67
RTN4-204ENST00000357732 PSMD1Q99460 953 aa19.24■□□□□ 0.67
RTN4-204ENST00000357732 FMO2Q99518 471 aa19.24■□□□□ 0.67
RTN4-204ENST00000357732 NYAP2Q9P242 653 aa19.24■□□□□ 0.67
RTN4-204ENST00000357732 USP21Q9UK80 565 aa19.24■□□□□ 0.67
RTN4-204ENST00000357732 RASSF9O75901 435 aa19.23■□□□□ 0.67
RTN4-204ENST00000357732 MMP14P50281 582 aa19.23■□□□□ 0.67
RTN4-204ENST00000357732 IRX3P78415 501 aaPredicted RBP19.23■□□□□ 0.67
RTN4-204ENST00000357732 CERS5Q8N5B7 392 aa19.23■□□□□ 0.67
RTN4-204ENST00000357732 U2AF1L4Q8WU68 220 aaKnown RBP19.23■□□□□ 0.67
RTN4-204ENST00000357732 CTNNBL1Q8WYA6 563 aaPredicted RBP19.23■□□□□ 0.67
RTN4-204ENST00000357732 VTI1AQ96AJ9 217 aa19.23■□□□□ 0.67
RTN4-204ENST00000357732 TLCD1Q96CP7 247 aa19.23■□□□□ 0.67
RTN4-204ENST00000357732 CRAMP1Q96RY5 1269 aa19.23■□□□□ 0.67
RTN4-204ENST00000357732 GOLPH3Q9H4A6 298 aa19.23■□□□□ 0.67
RTN4-204ENST00000357732 DDX20Q9UHI6 824 aaKnown RBP19.23■□□□□ 0.67
RTN4-204ENST00000357732 TTI1O43156 1089 aa19.22■□□□□ 0.67
RTN4-204ENST00000357732 EVI5O60447 810 aa19.22■□□□□ 0.67
RTN4-204ENST00000357732 GSCP56915 257 aaPredicted RBP19.22■□□□□ 0.67
RTN4-204ENST00000357732 DHX9Q08211 1270 aaKnown RBP19.22■□□□□ 0.67
RTN4-204ENST00000357732 LACTB2Q53H82 288 aaPredicted RBP19.22■□□□□ 0.67
RTN4-204ENST00000357732 PRR16Q569H4 304 aa19.22■□□□□ 0.67
RTN4-204ENST00000357732 AEBP2Q6ZN18 517 aaPredicted RBP19.22■□□□□ 0.67
RTN4-204ENST00000357732 CACNA2D3Q8IZS8 1091 aa19.22■□□□□ 0.67
RTN4-204ENST00000357732 LENG9Q96B70 501 aa19.22■□□□□ 0.67
RTN4-204ENST00000357732 SYT11Q9BT88 431 aa19.22■□□□□ 0.67
RTN4-204ENST00000357732 AMNQ9BXJ7 453 aa19.22■□□□□ 0.67
RTN4-204ENST00000357732 SEL1LQ9UBV2 794 aa19.22■□□□□ 0.67
RTN4-204ENST00000357732 MPHOSPH10O00566 681 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms