RNA–Protein interactions for RNA: ENST00000357058.7

RNF38-204, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-204ENST00000357058 TRIM49P0CI25 452 aa21.78■■□□□ 1.08
RNF38-204ENST00000357058 TRIM49CP0CI26 452 aa21.78■■□□□ 1.08
RNF38-204ENST00000357058 ATF2P15336 505 aa21.78■■□□□ 1.08
RNF38-204ENST00000357058 KRT15P19012 456 aa21.78■■□□□ 1.08
RNF38-204ENST00000357058 HOXA10P31260 410 aaPredicted RBP21.78■■□□□ 1.08
RNF38-204ENST00000357058 LLGL1Q15334 1064 aa21.78■■□□□ 1.08
RNF38-204ENST00000357058 DNAJC24Q6P3W2 148 aa21.78■■□□□ 1.08
RNF38-204ENST00000357058 FASTKD5Q7L8L6 764 aaKnown RBP21.78■■□□□ 1.08
RNF38-204ENST00000357058 CCDC125Q86Z20 511 aa21.78■■□□□ 1.08
RNF38-204ENST00000357058 CCDC97Q96F63 343 aaPredicted RBP21.78■■□□□ 1.08
RNF38-204ENST00000357058 SH2D3AQ9BRG2 576 aa21.78■■□□□ 1.08
RNF38-204ENST00000357058 CAPN11Q9UMQ6 739 aa21.78■■□□□ 1.08
RNF38-204ENST00000357058 FRMD5Q7Z6J6 570 aa21.78■■□□□ 1.08
RNF38-204ENST00000357058 INTS2Q9H0H0 1204 aaKnown RBP21.78■■□□□ 1.08
RNF38-204ENST00000357058 RGS16O15492 202 aaPredicted RBP21.78■■□□□ 1.08
RNF38-204ENST00000357058 SLC26A4O43511 780 aa21.78■■□□□ 1.08
RNF38-204ENST00000357058 CAP2P40123 477 aa21.78■■□□□ 1.08
RNF38-204ENST00000357058 MXRA7P84157 204 aa21.78■■□□□ 1.08
RNF38-204ENST00000357058 MED7O43513 233 aa21.78■■□□□ 1.08
RNF38-204ENST00000357058 PDE11AQ9HCR9 933 aa21.78■■□□□ 1.08
RNF38-204ENST00000357058 C6orf163Q5TEZ5 329 aa21.77■■□□□ 1.08
RNF38-204ENST00000357058 NBPF3Q9H094 633 aa21.77■■□□□ 1.08
RNF38-204ENST00000357058 FBXO28Q9NVF7 368 aa21.77■■□□□ 1.08
RNF38-204ENST00000357058 HPSEQ9Y251 543 aa21.77■■□□□ 1.08
RNF38-204ENST00000357058 NR3C2P08235 984 aa21.77■■□□□ 1.08
RNF38-204ENST00000357058 ITIH3Q06033 890 aa21.77■■□□□ 1.08
RNF38-204ENST00000357058 MTF1Q14872 753 aa21.77■■□□□ 1.08
RNF38-204ENST00000357058 NR1I3Q14994 352 aa21.77■■□□□ 1.08
RNF38-204ENST00000357058 SPATA33Q96N06 139 aa21.77■■□□□ 1.08
RNF38-204ENST00000357058 FAM193BQ96PV7 902 aaPredicted RBP21.77■■□□□ 1.08
RNF38-204ENST00000357058 IQCA1LA6NCM1 817 aa21.77■■□□□ 1.08
RNF38-204ENST00000357058 PALMO75781 387 aa21.77■■□□□ 1.08
RNF38-204ENST00000357058 ARL1P40616 181 aaPredicted RBP21.77■■□□□ 1.08
RNF38-204ENST00000357058 IRX5P78411 483 aaPredicted RBP21.77■■□□□ 1.08
RNF38-204ENST00000357058 CYFIP1Q7L576 1253 aa21.77■■□□□ 1.08
RNF38-204ENST00000357058 SNX25Q9H3E2 840 aa21.77■■□□□ 1.08
RNF38-204ENST00000357058 ODF2LQ9ULJ1 636 aa21.77■■□□□ 1.08
RNF38-204ENST00000357058 TTLL3Q9Y4R7 772 aa21.77■■□□□ 1.08
RNF38-204ENST00000357058 MYO1EQ12965 1108 aa21.77■■□□□ 1.07
RNF38-204ENST00000357058 SPOUT1Q5T280 376 aaKnown RBP21.77■■□□□ 1.07
RNF38-204ENST00000357058 SMAP1Q8IYB5 467 aaPredicted RBP21.77■■□□□ 1.07
RNF38-204ENST00000357058 COPB2P35606 906 aa21.76■■□□□ 1.07
RNF38-204ENST00000357058 IFRD2Q12894 506 aaPredicted RBP21.76■■□□□ 1.07
RNF38-204ENST00000357058 RHOT2Q8IXI1 618 aa21.76■■□□□ 1.07
RNF38-204ENST00000357058 RUNDC3BQ96NL0 473 aa21.76■■□□□ 1.07
RNF38-204ENST00000357058 MXRA8Q9BRK3 442 aa21.76■■□□□ 1.07
RNF38-204ENST00000357058 CCZ1BP86790 482 aa21.76■■□□□ 1.07
RNF38-204ENST00000357058 CCZ1P86791 482 aaPredicted RBP21.76■■□□□ 1.07
RNF38-204ENST00000357058 DRAP1Q14919 205 aaPredicted RBP21.76■■□□□ 1.07
RNF38-204ENST00000357058 UHMK1Q8TAS1 419 aaKnown RBP21.76■■□□□ 1.07
RNF38-204ENST00000357058 DAAM1Q9Y4D1 1078 aa21.76■■□□□ 1.07
RNF38-204ENST00000357058 XRN1Q8IZH2 1706 aaKnown RBP21.76■■□□□ 1.07
RNF38-204ENST00000357058 SYNJ2BP-COX16A0A087WUM0 186 aa21.76■■□□□ 1.07
RNF38-204ENST00000357058 GOLGA8KD6RF30 607 aa21.76■■□□□ 1.07
RNF38-204ENST00000357058 SETDB1Q15047 1291 aa21.76■■□□□ 1.07
RNF38-204ENST00000357058 BSPRYQ5W0U4 402 aa21.76■■□□□ 1.07
RNF38-204ENST00000357058 CATSPER4Q7RTX7 472 aa21.76■■□□□ 1.07
RNF38-204ENST00000357058 RHPN2Q8IUC4 686 aa21.76■■□□□ 1.07
RNF38-204ENST00000357058 TAB3Q8N5C8 712 aaPredicted RBP21.76■■□□□ 1.07
RNF38-204ENST00000357058 LRRC4BQ9NT99 713 aa21.76■■□□□ 1.07
RNF38-204ENST00000357058 COX16Q9P0S2 106 aa21.76■■□□□ 1.07
RNF38-204ENST00000357058 PPP2R5DQ14738 602 aa21.75■■□□□ 1.07
RNF38-204ENST00000357058 TKFCQ3LXA3 575 aa21.75■■□□□ 1.07
RNF38-204ENST00000357058 PPP1R3GB7ZBB8 358 aa21.75■■□□□ 1.07
RNF38-204ENST00000357058 RPA1P27694 616 aa21.75■■□□□ 1.07
RNF38-204ENST00000357058 MICALL1Q8N3F8 863 aa21.75■■□□□ 1.07
RNF38-204ENST00000357058 ATG4CQ96DT6 458 aa21.75■■□□□ 1.07
RNF38-204ENST00000357058 TRIM7Q9C029 511 aa21.75■■□□□ 1.07
RNF38-204ENST00000357058 RGPD8O14715 1765 aaPredicted RBP21.75■■□□□ 1.07
RNF38-204ENST00000357058 SHMT1P34896 483 aa21.75■■□□□ 1.07
RNF38-204ENST00000357058 PHKA2P46019 1235 aa21.75■■□□□ 1.07
RNF38-204ENST00000357058 ZNF568Q3ZCX4 644 aa21.75■■□□□ 1.07
RNF38-204ENST00000357058 SGO2Q562F6 1265 aa21.75■■□□□ 1.07
RNF38-204ENST00000357058 PDXDC1Q6P996 788 aa21.75■■□□□ 1.07
RNF38-204ENST00000357058 C7orf31Q8N865 590 aa21.75■■□□□ 1.07
RNF38-204ENST00000357058 FBF1Q8TES7 1133 aa21.75■■□□□ 1.07
RNF38-204ENST00000357058 FAM114A2Q9NRY5 505 aa21.75■■□□□ 1.07
RNF38-204ENST00000357058 SRGAP2O75044 1071 aa21.75■■□□□ 1.07
RNF38-204ENST00000357058 MAP7D3Q8IWC1 876 aa21.75■■□□□ 1.07
RNF38-204ENST00000357058 PALM2Q8IXS6 379 aa21.75■■□□□ 1.07
RNF38-204ENST00000357058 FAM217BQ9NTX9 383 aaPredicted RBP21.75■■□□□ 1.07
RNF38-204ENST00000357058 MYL3P08590 195 aa21.74■■□□□ 1.07
RNF38-204ENST00000357058 EPHB4P54760 987 aa21.74■■□□□ 1.07
RNF38-204ENST00000357058 SNX1Q13596 522 aa21.74■■□□□ 1.07
RNF38-204ENST00000357058 B4GALNT4Q76KP1 1039 aa21.74■■□□□ 1.07
RNF38-204ENST00000357058 RPUSD2Q8IZ73 545 aaKnown RBP21.74■■□□□ 1.07
RNF38-204ENST00000357058 ZNF668Q96K58 619 aaPredicted RBP21.74■■□□□ 1.07
RNF38-204ENST00000357058 MED4Q9NPJ6 270 aa21.74■■□□□ 1.07
RNF38-204ENST00000357058 EIF3CLB5ME19 914 aaKnown RBP21.74■■□□□ 1.07
RNF38-204ENST00000357058 ALDH3A1P30838 453 aa21.74■■□□□ 1.07
RNF38-204ENST00000357058 GBP1P32455 592 aa21.74■■□□□ 1.07
RNF38-204ENST00000357058 EIF3CQ99613 913 aaKnown RBP21.74■■□□□ 1.07
RNF38-204ENST00000357058 RFX6Q8HWS3 928 aa21.74■■□□□ 1.07
RNF38-204ENST00000357058 HAUS1Q96CS2 278 aa21.74■■□□□ 1.07
RNF38-204ENST00000357058 NALCNQ8IZF0 1738 aa21.74■■□□□ 1.07
RNF38-204ENST00000357058 EMSYQ7Z589 1322 aa21.74■■□□□ 1.07
RNF38-204ENST00000357058 CCDC151A5D8V7 595 aa21.74■■□□□ 1.07
RNF38-204ENST00000357058 PLSCR1O15162 318 aa21.74■■□□□ 1.07
RNF38-204ENST00000357058 HEXIM2Q96MH2 286 aaKnown RBP21.74■■□□□ 1.07
RNF38-204ENST00000357058 AP1M1Q9BXS5 423 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms