RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 RBL2Q08999 1139 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 CALCRLQ16602 461 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 FAM47CQ5HY64 1035 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 LARP1BQ659C4 914 aaKnown RBP4.47□□□□□ -1.69
CNOT4-202ENST00000356162 MIER3Q7Z3K6 550 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 TRIM50Q86XT4 487 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 NEK9Q8TD19 979 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 TNPO1Q92973 898 aaKnown RBP4.47□□□□□ -1.69
CNOT4-202ENST00000356162 ZNF775Q96BV0 537 aaPredicted RBP4.47□□□□□ -1.69
CNOT4-202ENST00000356162 PCYT2Q99447 389 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 UNC45AQ9H3U1 944 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 TUT1Q9H6E5 874 aaKnown RBP4.47□□□□□ -1.69
CNOT4-202ENST00000356162 BCAS3Q9H6U6 928 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 ERAP1Q9NZ08 941 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 GMPR2Q9P2T1 348 aaKnown RBP4.47□□□□□ -1.69
CNOT4-202ENST00000356162 PRKAG2Q9UGJ0 569 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 VAV3Q9UKW4 847 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 SIP14410 1827 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 KAT6AQ92794 2004 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 C17orf102A2RUQ5 167 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 VPS37CA5D8V6 355 aaPredicted RBP4.47□□□□□ -1.69
CNOT4-202ENST00000356162 BACH1O14867 736 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 DKC1O60832 514 aaKnown RBP eCLIP4.47□□□□□ -1.69
CNOT4-202ENST00000356162 CAND2O75155 1236 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 BMP15O95972 392 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 RPLP2P05387 115 aaKnown RBP4.47□□□□□ -1.69
CNOT4-202ENST00000356162 OR52Z1P0C646 297 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 GNAT1P11488 350 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 FAAP100Q0VG06 881 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 PPFIA1Q13136 1202 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 PTK7Q13308 1070 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 BFSP2Q13515 415 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 BECN1Q14457 450 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 PLCB4Q15147 1175 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 RILPL1Q5EBL4 403 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 MCTP1Q6DN14 999 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 CCDC60Q8IWA6 550 aaPredicted RBP4.47□□□□□ -1.69
CNOT4-202ENST00000356162 C7orf31Q8N865 590 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 CAGE1Q8TC20 777 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 ATP8B4Q8TF62 1192 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 HAS1Q92839 578 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 GLG1Q92896 1179 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 PRDM5Q9NQX1 630 aaPredicted RBP4.47□□□□□ -1.69
CNOT4-202ENST00000356162 ZNF302Q9NR11 478 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 DISC1Q9NRI5 854 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 TMEM39AQ9NV64 488 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 HDAC6Q9UBN7 1215 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 ZMYND8Q9ULU4 1186 aaPredicted RBP4.47□□□□□ -1.69
CNOT4-202ENST00000356162 TELO2Q9Y4R8 837 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 PCDHA10Q9Y5I2 948 aa4.47□□□□□ -1.69
CNOT4-202ENST00000356162 RRN3P2A6NIE6 340 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 H0YGN5 161 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 LAD1O00515 517 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 CHMP2AO43633 222 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 MARCH6O60337 910 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 HBP1O60381 514 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 HSP90AA1P07900 732 aaKnown RBP4.46□□□□□ -1.7
CNOT4-202ENST00000356162 MCM7P33993 719 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 RFC2P35250 354 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 PRPHP41219 470 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 STAT5BP51692 787 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 RESTQ13127 1097 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 EPHA7Q15375 998 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 GRIK4Q16099 956 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 TMEM266Q2M3C6 531 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 ZNF484Q5JVG2 852 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 GDF6Q6KF10 455 aaPredicted RBP4.46□□□□□ -1.7
CNOT4-202ENST00000356162 PDXDC2PQ6P474 469 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 FOXJ1Q92949 421 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 ATP6V0A1Q93050 837 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 MTMR9Q96QG7 549 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 NOC4LQ9BVI4 516 aaKnown RBP4.46□□□□□ -1.7
CNOT4-202ENST00000356162 ATP13A2Q9NQ11 1180 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 IGSF5Q9NSI5 407 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 MTMR6Q9Y217 621 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 NOD1Q9Y239 953 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 PPME1Q9Y570 386 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 MAFBQ9Y5Q3 323 aaPredicted RBP4.46□□□□□ -1.7
CNOT4-202ENST00000356162 NRCAMQ92823 1304 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 TRIP12Q14669 1992 aaPredicted RBP4.46□□□□□ -1.7
CNOT4-202ENST00000356162 MBLAC1A4D2B0 266 aaPredicted RBP4.46□□□□□ -1.7
CNOT4-202ENST00000356162 TRIM43BA6NCK2 446 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 STX6O43752 255 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 PARNO95453 639 aaKnown RBP4.46□□□□□ -1.7
CNOT4-202ENST00000356162 TIMP1P01033 207 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 RAG1P15918 1043 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 SYT1P21579 422 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 MARK3P27448 753 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 ADAM17P78536 824 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 PRKCEQ02156 737 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 SPIRE1Q08AE8 756 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 PPIGQ13427 754 aaKnown RBP eCLIP4.46□□□□□ -1.7
CNOT4-202ENST00000356162 PTGISQ16647 500 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 TRIM71Q2Q1W2 868 aaKnown RBP4.46□□□□□ -1.7
CNOT4-202ENST00000356162 NCAPH2Q6IBW4 605 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 SH3RF1Q7Z6J0 888 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 SERINC5Q86VE9 423 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 LMBR1Q8WVP7 490 aa4.46□□□□□ -1.7
CNOT4-202ENST00000356162 DHX38Q92620 1227 aaKnown RBP4.46□□□□□ -1.7
CNOT4-202ENST00000356162 TRIM43Q96BQ3 446 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms