RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 KLRC3Q07444 240 aa8.32□□□□□ -1.08
CCR9-201ENST00000355983 EHHADHQ08426 723 aa8.32□□□□□ -1.08
CCR9-201ENST00000355983 GIT2Q14161 759 aa8.32□□□□□ -1.08
CCR9-201ENST00000355983 CCDC92Q53HC0 331 aaPredicted RBP8.32□□□□□ -1.08
CCR9-201ENST00000355983 CYB5RLQ6IPT4 315 aa8.32□□□□□ -1.08
CCR9-201ENST00000355983 EXOC3L1Q86VI1 746 aa8.32□□□□□ -1.08
CCR9-201ENST00000355983 LONP2Q86WA8 852 aa8.32□□□□□ -1.08
CCR9-201ENST00000355983 DDX42Q86XP3 938 aaKnown RBP eCLIP8.32□□□□□ -1.08
CCR9-201ENST00000355983 ANKLE1Q8NAG6 615 aa8.32□□□□□ -1.08
CCR9-201ENST00000355983 PPFIBP2Q8ND30 876 aa8.32□□□□□ -1.08
CCR9-201ENST00000355983 ZNF526Q8TF50 670 aaPredicted RBP8.32□□□□□ -1.08
CCR9-201ENST00000355983 ARHGEF1Q92888 912 aaKnown RBP8.32□□□□□ -1.08
CCR9-201ENST00000355983 MAGEB18Q96M61 343 aa8.32□□□□□ -1.08
CCR9-201ENST00000355983 TUBB6Q9BUF5 446 aa8.32□□□□□ -1.08
CCR9-201ENST00000355983 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.32□□□□□ -1.08
CCR9-201ENST00000355983 MTFR1LQ9H019 292 aa8.32□□□□□ -1.08
CCR9-201ENST00000355983 DISC1Q9NRI5 854 aa8.32□□□□□ -1.08
CCR9-201ENST00000355983 FGFR1OP2Q9NVK5 253 aa8.32□□□□□ -1.08
CCR9-201ENST00000355983 STXBP5LQ9Y2K9 1186 aa8.32□□□□□ -1.08
CCR9-201ENST00000355983 STARD13Q9Y3M8 1113 aa8.32□□□□□ -1.08
CCR9-201ENST00000355983 NOC2LQ9Y3T9 749 aaKnown RBP8.32□□□□□ -1.08
CCR9-201ENST00000355983 PITPNM2Q9BZ72 1349 aa8.32□□□□□ -1.08
CCR9-201ENST00000355983 DLEC1Q9Y238 1755 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 TCP11X1B4DZS4 312 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 MBD4O95243 580 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 ITGA2BP08514 1039 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 KLRC1P26715 233 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 MAGEA10P43363 369 aaPredicted RBP8.31□□□□□ -1.08
CCR9-201ENST00000355983 CD97P48960 835 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 BPIFB4P59827 614 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 PTENP60484 403 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 USP46P62068 366 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 GFPT1Q06210 699 aaPredicted RBP8.31□□□□□ -1.08
CCR9-201ENST00000355983 SLC34A1Q06495 639 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 CBX3Q13185 183 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 RASIP1Q5U651 963 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 RGS9BPQ6ZS82 235 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 INTS8Q75QN2 995 aaKnown RBP8.31□□□□□ -1.08
CCR9-201ENST00000355983 RRAGAQ7L523 313 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 ZNF554Q86TJ5 538 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 ZNF512BQ96KM6 892 aaPredicted RBP8.31□□□□□ -1.08
CCR9-201ENST00000355983 SERPINB12Q96P63 405 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 YIPF2Q9BWQ6 316 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 PHACTR1Q9C0D0 580 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 CCSER1Q9C0I3 900 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 AZI2Q9H6S1 392 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 LGR6Q9HBX8 967 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 STK32BQ9NY57 414 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 PTTG2Q9NZH5 202 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 STX18Q9P2W9 335 aaKnown RBP8.31□□□□□ -1.08
CCR9-201ENST00000355983 DNAJB4Q9UDY4 337 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 INTUQ9ULD6 942 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 SSX2IPQ9Y2D8 614 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 THRAP3Q9Y2W1 955 aaKnown RBP8.31□□□□□ -1.08
CCR9-201ENST00000355983 TMED5Q9Y3A6 229 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 ATP6V0A2Q9Y487 856 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 USH1CQ9Y6N9 552 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 AKAP11Q9UKA4 1901 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 CAMTA1Q9Y6Y1 1673 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 PASKQ96RG2 1323 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 LTN1O94822 1766 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 BCORQ6W2J9 1755 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 KRIT1O00522 736 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 KCNK3O14649 394 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 MAPK13O15264 365 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 RNMTO43148 476 aaKnown RBP8.31□□□□□ -1.08
CCR9-201ENST00000355983 PFDN1O60925 122 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 TCEA3O75764 348 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 UPP2O95045 317 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 ITGA6P23229 1130 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 MARK3P27448 753 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 PTPN4P29074 926 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 RAB15P59190 212 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 PTGDRQ13258 359 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 AUHQ13825 339 aaKnown RBP8.31□□□□□ -1.08
CCR9-201ENST00000355983 UBE3CQ15386 1083 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 SNX30Q5VWJ9 437 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 CENPPQ6IPU0 288 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 DNAJC14Q6Y2X3 702 aaPredicted RBP8.31□□□□□ -1.08
CCR9-201ENST00000355983 SYCE1Q8N0S2 351 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 RNF25Q96BH1 459 aaPredicted RBP8.31□□□□□ -1.08
CCR9-201ENST00000355983 SLC7A6OSQ96CW6 309 aaPredicted RBP8.31□□□□□ -1.08
CCR9-201ENST00000355983 ERP44Q9BS26 406 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 TBC1D10AQ9BXI6 508 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 DHX36Q9H2U1 1008 aaKnown RBP8.31□□□□□ -1.08
CCR9-201ENST00000355983 BARX2Q9UMQ3 279 aaPredicted RBP8.31□□□□□ -1.08
CCR9-201ENST00000355983 ATP8A1Q9Y2Q0 1164 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 ACTL7BQ9Y614 415 aa8.31□□□□□ -1.08
CCR9-201ENST00000355983 B4E1Z4 1266 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 EYA2O00167 538 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 LYNP07948 512 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 ACADVLP49748 655 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 IFI35P80217 286 aaPredicted RBP8.3□□□□□ -1.08
CCR9-201ENST00000355983 MGAT5Q09328 741 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 SPIDRQ14159 915 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 BTG3Q14201 252 aaPredicted RBP8.3□□□□□ -1.08
CCR9-201ENST00000355983 ZNF568Q3ZCX4 644 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 RINLQ6ZS11 566 aa8.3□□□□□ -1.08
CCR9-201ENST00000355983 MARK2Q7KZI7 788 aaKnown RBP8.3□□□□□ -1.08
CCR9-201ENST00000355983 ECHDC2Q86YB7 292 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms